Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20hubeiensis_20[genbank_20GCA_5F001736105.1_202016-09-20] 9,793 sequences; 21,322,328 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq33 223 4e-53 seq62 95.1 2e-14 >seq33 Length=192376 Score = 223 bits (246), Expect = 4e-53 Identities = 572/862 (66%), Gaps = 13/862 (2%) Strand=Plus/Plus Query 111230 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 111289 |||||||| || || || | ||||| || || ||| || | | ||||||| | Sbjct 133670 GGAAGGGCAATGGAGGCAAGGTTGCAGACGGCGACCTCGTCGGGAGCGCTGTACTCGATG 133729 Query 111290 ATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTG 111349 || || || || | |||||| | ||| || || || | ||||| ||||| ||||| | Sbjct 133730 ATCTCGGTGCACAGGTTGGAGCACTTGATAGTGCCGAGGTTCTTCTGGTTGCTCTTTCGG 133789 Query 111350 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATA 111409 ||| || ||||||||||| ||| |||| | || ||||| ||||| || | ||| || Sbjct 133790 TTGGCAGCGTCCTTGTAGAGGATGAAGGGGTTGCCGGTCTCTGTCTGCGACTCGAGGATG 133849 Query 111410 GCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTT 111468 || | ||| | | || ||| || | || || |||| || ||||| |||||||| Sbjct 133850 GCGTACCAGAGCTTCTGCGCCTTG-ACGGTGCGCTTGGAGCGACCCTCGGCCTCGTAGCG 133908 Query 111469 TGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGG 111528 ||||||| || ||||| || || ||||| |||||| || || || || Sbjct 133909 CTCGTAGAGGCGCTCGAACTCGTCGCCGTAGCAGTCGGCGAGACCGGGGCACTCGTTGGG 133968 Query 111529 ACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCA 111588 || | || ||||| | || | ||| |||| ||||||||| || || || | ||| Sbjct 133969 GCACATGAGCGACCAGTCGCCGTTCTGCTCGACCCTCTTCATGAAGAGATCGGGCACCCA 134028 Query 111589 CAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTC 111648 || | | ||||| || | | || ||||||| | || ||||| || | || Sbjct 134029 GAGCGCGTAGAAGAGCTCACGAGCACGCACCTCTTCCTTTCCGTGGTTCTTGCGGAGGTC 134088 Query 111649 AAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CT 111704 ||||||||| | | |||| |||||||||||| | |||| |||| | || | Sbjct 134089 AAGGAACTCGAACACGTCCGAGTGCCATGGCTCGATGTAGATGGCGAAGGCACCGGGGCG 134148 Query 111705 TTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAA 111764 | | | ||| | || | || |||||||| ||| ||| || ||||| ||||| || | Sbjct 134149 CTTGTTG-CCACCCTGGTCAACGTAGCGCGCAGTGTTGTTGAAGACGCGGAGCATGGGGA 134207 Query 111765 TAATACCAT--CTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATC 111822 ||||||| |||| ||| || || || ||| ||| | | | | Sbjct 134208 CGATACCATTGCTGA--CACCGTTGGTGCCGGCAATGTAGGATCCGGTACCGCGGATGCA 134265 Query 111823 ATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGT 111882 ||||||| | || ||||| || || ||| ||||| |||||| | | || || Sbjct 134266 GTGGATGTTGAGGCCGATACCACCGGCGGTCTTGGAGATCATGGCACACGTCTTGAGCGT 134325 Query 111883 TCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTG 111942 | ||||| |||| ||| ||||| ||||| ||| || ||||||||| || | ||| Sbjct 134326 GTCGTAGATGCCGTCGATCGAGTCGTCCTTCATGGTGACAAGGAAGCACGACGAGAGCTG 134385 Query 111943 CGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATAC-CTTGGG 112001 ||| ||| |||||||| ||||||||||| || | ||||| |||| ||| ||| | Sbjct 134386 CGGGTGTGGGGTACCAGCGTTGAAGAGGGTGGGCGAGGCGTGGGTGAA-GTACTTTTGCG 134444 Query 112002 ACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGA 112061 |||| || ||| ||||| | | | || ||||| | |||||||| |||| |||| Sbjct 134445 ACATGAGGTTGTACGTCTCGATGGCGCTCTCGATGTCCTGGCCGTGGATTCCGACGGCGA 134504 Query 112062 CCCGCATGAACATGTACTGTGG 112083 | ||||||| ||||| ||| || Sbjct 134505 CACGCATGAGCATGTGCTGGGG 134526 >seq62 Length=98030 Score = 95.1 bits (104), Expect = 2e-14 Identities = 295/449 (66%), Gaps = 16/449 (4%) Strand=Plus/Plus Query 122378 CGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATAAAGTCAA 122437 ||||| |||||| |||||||||||||| || | | ||| ||||| ||||||||||| | Sbjct 36866 CGACCTTCTTCTCGAAGAAGTTGGTCTTGCCTTGCAAGCTGATGTTCTCCATAAAGTCGA 36925 Query 122438 ATGGATTCTTCGCGTTCC------AAATGGGTGGCACCCCAACTTGTTTGAGGAGACGAT 122491 | || || | ||| || || |||| || | | | | | || || | Sbjct 36926 AGGGGTTTGTTGCG--CCGTAGTGAACAGGGTTGC---CGAGCGAGACCAAA-AGGCGGT 36979 Query 122492 CCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGGTT-ACAT 122550 | | || ||||| ||||| | ||| | | | |||||| ||||| | | | ||| Sbjct 36980 CTGCAACGTACTCGATGTATTGACGCATGAGCGCGGCGTTCATGCCGATCAAGCTGACA- 37038 Query 122551 GGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGCGTGG 122610 || | |||||| || ||| | ||||| ||||| || ||||| | | ||| | | Sbjct 37039 GGCAATGCGTCTGTGAGGAAGGCCTTCTCGATCTCGACGGCCTCGCTGATGATCTTGAGC 37098 Query 122611 ATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCT-TGAAGAGCTCCACGGCAAACTCCTG 122669 | || |||| ||| | | | | || ||||||| |||||| || Sbjct 37099 ACCGTGTCGGG-GTGTGCGCGCTTCTTGAGGTGGCTGAAGAGGAGGCAGGCAAAGTCGGT 37157 Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729 ||| |||||||| || || || || || || || |||||| ||||| ||||||||||| Sbjct 37158 GTGAAGACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTGAGACCGGGCATGAGACC 37217 Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789 |||||||| | ||| | || | | ||| || || ||||||||||| ||||| || Sbjct 37218 ACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAACCAGAGAAGAAGATGCCCTCGACGGC 37277 Query 122790 CGCAAACGCAAAAAGGCGTTCGGCGAAGG 122818 ||||| || | || || || || |||| Sbjct 37278 AGCAAAGGCGATGAGACGCTCTGCAAAGG 37306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627955121032800