Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20hubeiensis_20[genbank_20GCA_5F001736105.1_202016-09-20] 9,793 sequences; 21,322,328 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq33 196 6e-45 seq10 156 5e-33 seq62 145 9e-30 seq39 100 4e-16 >seq33 Length=192376 Score = 196 bits (216), Expect = 6e-45 Identities = 896/1398 (64%), Gaps = 41/1398 (3%) Strand=Plus/Plus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 ||||| |||| |||||| ||||| |||||||| ||| || | ||| || || || Sbjct 133148 TAGATGTTGGACGTGTACGGCTCGAAGCACTCGTTGAAGCCGAGGATCTGACTGGTCGAA 133207 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACC---CTTTTCCCTAATGCGT 118298 || || |||||||| |||| || || ||| |||||||| ||| | | || || Sbjct 133208 GCGGTAGGCATGGGCGCCAACAGCAGCGAGTTGCGGAGACCGTGCTTAGCGATCTTG-GT 133266 Query 118299 TCCTTGAGAGCGTCCCAGTCGTA---GTTG--AGCTTTGTCTCCCCCTGCCACATATCAA 118353 |||||| | ||||||| | || | || || | |||| |||| || Sbjct 133267 --CTTGAGCTCAGCCCAGTCCCACAGGTCGGAAGGCGTGACGCCCC-----ACATGTCGT 133319 Query 118354 ACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCT 118413 |||| || || || || || ||||| || | | ||||| || | ||| | ||| Sbjct 133320 ACTGCAGCTCGCCCTGCGAGGCGGGCGAGCCTGCGTAGGTCTCGTAGGTGCCGTGCTCCT 133379 Query 118414 CCGCCAATTCGGA-GCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCA 118472 |||| ||| | | |||| |||||||| ||||| || || || || || || | | Sbjct 133380 GGGCCAGCTCGCACGATCGC-TCGAGGGCGGCGTGGTAGATGGTCTCGAAGATCTGCACG 133438 Query 118473 TTCATTGCCTTGGCCTCGTCGGAATCAAACGCG-AGTCGGCACAAA-ATAAATACATCCG 118530 || | |||||| || || || ||| || | || | || || | || | Sbjct 133439 TTGAGACGGCGAGCCTCGGGCGATTCGAAGGCGTAGCC--CATGATCATGAAGGCGTCGG 133496 Query 118531 CGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCT 118590 ||||||| |||||||||| ||| || |||||||| | ||| || ||| | || || || Sbjct 133497 CGAGACCCTGGACACCGATGCCGATAGGGCGATGGCGCATGTTGGACCTGCGGGCCTCCT 133556 Query 118591 CCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGA 118650 | ||||| || | || | ||||| | | | || || || ||| || |||| | || Sbjct 133557 CGACGGGGTAGTAGTTGATGTCGATGATCTTGTTGAGGTTCTTGCAGATGGCCTTGGCGA 133616 Query 118651 TTTCATGAAGCTTTTCGTAATC--AAAACTGCGAGTCTCT-TCATTGACATACTTAGGAA 118707 || || | | | || | | || | | | || ||| | | |||| Sbjct 133617 CACTGTGGAGGCGCTTGAAGTCGTAGACCTTGGTGACGGGGTCGATGA---AGGTGGGAA 133673 Query 118708 GGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTT 118767 |||| || || || || || || || | | ||| || | | ||||||| || || | Sbjct 133674 GGGCAATGGAGGCAAGGTTGCAGACGGCGACCTCGTCGGGAGCGCTGTACTCGATGATCT 133733 Query 118768 CCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTAC 118827 | ||||||| ||| || | ||| || ||||| | |||||| || || |||| ||| Sbjct 133734 CGGTGCACAGGTTGGAGCACTTGATAGTGCCGAGGTTCTTCTGGTTGCTCTTTCGGTTGG 133793 Query 118828 ACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCT 118887 || |||||||| || ||| | || | || ||||| || || |||| ||| || || | Sbjct 133794 CAGCGTCCTTGTAGAGGATGAAGGGGTTGCCGGTCTCTGTCTGCGACTCGAGGATGGCGT 133853 Query 118888 TCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTG 118946 ||||| | || || || | || ||| |||| || ||||| ||||||| | Sbjct 133854 ACCAGAGCTTCTGCGCCTTG-ACGGTGCGCTTGGAGCGACCCTCGGCCTCGTAGCGCTCG 133912 Query 118947 TAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAG 119006 |||||| || ||||| || || | || | ||| || || || | ||||| Sbjct 133913 TAGAGGCGCTCGAACTCGTCGCCGTAGCAGTCGGCGAGACCGGGGCACTCGTTGGGGCAC 133972 Query 119007 AAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGC 119066 | ||| ||||| | || || ||| |||| |||||||||||| || || | ||||||| Sbjct 133973 ATGAGCGACCAGTCGCCGTTCTGCTCGACCCTCTTCATGAAGAGATCGGGCACCCAGAGC 134032 Query 119067 GCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAA 119126 || ||||||| || ||| || | ||||| | || || || || | || | Sbjct 134033 GCGTAGAAGAGCTCACGAGCACGCACCTCTTCCTTTCCGTGGTTCTTGCGGAGGTCAAGG 134092 Query 119127 AAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-AC-----CCCTTA 119180 || || | | |||| |||||| || || | ||| | |||| | || | ||| Sbjct 134093 AACTCGAACACGTCCGAGTGCCATGGCTCGATGTAGATGGCGAAGGCACCGGGGCGCTT- 134151 Query 119181 CGACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATG 119240 | | ||| |||||| || || | ||||||| ||| || || || ||||| || | | Sbjct 134152 -GTTG-CCACCCTGGTCAACGTAGCGCGCAGTGTTGTTGAAGACGCGGAGCATGGGGACG 134209 Query 119241 ATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTGG 119300 ||||||| | || || || || ||| || | | | || |||| Sbjct 134210 ATACCATTGCTGACACCGTTGGTGCCGGCAATGTAGGATCCGGTACCGCGGATGCAGTGG 134269 Query 119301 ATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCG 119360 |||| | || ||||| || || ||| ||||| || ||| | |||| || || Sbjct 134270 ATGTTGAGGCCGATACCACCGGCGGTCTTGGAGATCATGGCACACGTCTTGAGCGTGTCG 134329 Query 119361 TAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGC 119420 ||||| || ||||||||||| |||| | | || |||||||| ||| | || || Sbjct 134330 TAGATGCCGTCGATCGAGTCGTCCTTCATGGTGACAAGGAAGCACGACGAGAGCTGCGGG 134389 Query 119421 CTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATAC-CTTGGGACAT 119479 || ||||||||||||||||| || || | |||||| |||| ||| ||| ||||| Sbjct 134390 TGTGGGGTACCAGCGTTGAAGAGGGTGGGCGAGGCGTGGGTGAA-GTACTTTTGCGACAT 134448 Query 119480 CTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCG 119539 || ||| ||||| | | || ||||| | ||||| || |||| | ||| || Sbjct 134449 GAGGTTGTACGTCTCGATGGCGCTCTCGATGTCCTGGCCGTGGATTCCGACGGCGACACG 134508 Query 119540 CATAAACATGTATTGGGG 119557 ||| | ||||| ||||| Sbjct 134509 CATGAGCATGTGCTGGGG 134526 >seq10 Length=380723 Score = 156 bits (172), Expect = 5e-33 Identities = 237/333 (71%), Gaps = 12/333 (4%) Strand=Plus/Minus Query 179733 CTTGAGGAGCGATGGCCAGAAGTAGTGGATCATATTGAGGATGAGACCCTTAATGTGTGA 179792 |||||| ||||| || |||||| || || | |||| ||||||||| || ||||| || Sbjct 327801 CTTGAGCAGCGACGGGTAGAAGTGGTCGAGGAAGTTGATGATGAGACCTTTGATGTGCGA 327742 Query 179793 ACCATCGTTATCCGCATCCGTCATAATCATAAGCCGACCATAGCG-AAGCTCGGAAACAT 179851 |||||||| |||| ||| ||||| ||||| | | || ||||| ||||| | |||| Sbjct 327741 ACCATCGTGATCCTGATCGGTCATGATCATGATACTGCCGTAGCGCAAGCT-GTTGACAT 327683 Query 179852 CTTGATAATCCTTACCTTGTTGAAGACCCAAGATCTTCTTGAGATCATTGAACTCTTGGT 179911 | |||| | ||| || || |||||||| | ||||| ||||| | |||| || | Sbjct 327682 CGAGATACTGCTTGCCGTGCTGAAGACCAAGGATCTCCTTGATGGCCTTGATTTCGGCAT 327623 Query 179912 T-----TGATGTGAGTTGCGCCACTGAAGCATCTCGGACATTTTTACACTTCCCACGGAG 179966 | |||| ||| | | || || || ||||| || || ||| |||||||| Sbjct 327622 TCTTCATGATCTGA-TCGTGC----GAGGCTTCTCGCACGTTGAGGAGCTTACCACGGAG 327568 Query 179967 AGGGAACACACCGTAGTGATCACGACCAACCACAGAGAGACCAGCAACTGCGAGGGTCTT 180026 ||||| |||||||| | || || || ||| | || |||||| || ||||| | ||| Sbjct 327567 CGGGAAAACACCGTAATTGTCTCGTCCGACCTCGACGATACCAGCCACAGCGAGCGACTT 327508 Query 180027 CGCGGAATCACCCTCCGTCACGATGAGCGTACA 180059 || |||||||| ||||| | |||||||||||| Sbjct 327507 GGCCGAATCACCTTCCGTGAGGATGAGCGTACA 327475 >seq62 Length=98030 Score = 145 bits (160), Expect = 9e-30 Identities = 302/441 (68%), Gaps = 14/441 (3%) Strand=Plus/Plus Query 129742 CTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATAAAATCAAATGGGTT 129801 ||||||||||||||| ||||| || | ||||||||| ||||||||||| || || ||||| Sbjct 36873 CTTCTCGAAGAAGTTGGTCTTGCCTTGCAAGCTGATGTTCTCCATAAAGTCGAAGGGGTT 36932 Query 129802 CTTTGAGTTCCAAATTG--CTGGCACTCCAATCTGTTTGAGGAGACGATCCGAGACGTAC 129859 ||| | || | || | || || | | | || || || | |||||| Sbjct 36933 TGTTGCG--CCGTAGTGAACAGGGTTGCCGAGCGAGACCAAAAGGCGGTCTGCAACGTAC 36990 Query 129860 TCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTT-ACATGGGAGCGCGTC 129918 || ||||| | | ||| | ||| |||||| ||||| | | | ||| || | ||||| Sbjct 36991 TCGATGTATTGACGCATGAGCGCGGCGTTCATGCCGATCAAGCTGACA-GGCAATGCGTC 37049 Query 129919 CAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTGAATGGTCTCCG- 129977 || ||| ||||||| || || || || || | | ||| | | | || || | Sbjct 37050 TGTGAGGAAGGCCTTCTCGATCTCGACGGCCTCGCTGATGATCTTGAGCACCGTGTCGGG 37109 Query 129978 ---TGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTCCTGGTGGAGAC 130034 ||| | | | ||| | | || |||||| |||||| || ||| |||| Sbjct 37110 GTGTGCGCGCT-TCTTGAGGT--GGCT-GAAGAGGAGGCAGGCAAAGTCGGTGTGAAGAC 37165 Query 130035 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCT 130094 |||||||||| |||||||| || || |||||| ||||| ||||||||||| ||||||| Sbjct 37166 CCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTGAGACCGGGCATGAGACCACGCTTCT 37225 Query 130095 TCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACG 130154 | | |||||| || | || || |||||||||||||| ||||| || || || | Sbjct 37226 TGAGCCAGAAGATGGAGGCGAAGGAACCAGAGAAGAAGATGCCCTCGACGGCAGCAAAGG 37285 Query 130155 CAAAGAGACGCTCAGCAAAGG 130175 | | ||||||||| ||||||| Sbjct 37286 CGATGAGACGCTCTGCAAAGG 37306 >seq39 Length=164988 Score = 100 bits (110), Expect = 4e-16 Identities = 165/237 (70%), Gaps = 6/237 (3%) Strand=Plus/Minus Query 14233 CTTACCGACGGCGTCAATTTCATCGATGAAAACGATACATGGT---TGATTTTCACGGGC 14289 |||||||| |||||| || ||||||||||| | ||| || || || || | ||| Sbjct 66753 CTTACCGATGGCGTCGATCTCATCGATGAAGATGATGCACGGAGCGTGCTTCTT---GGC 66697 Query 14290 AACTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATT 14349 | || || ||||| |||| ||| ||||||||| ||||||||||| ||||| | Sbjct 66696 GTTGGCGAACATGTCTCGGACTCGGCTGGGACCGACACCGACAAACATCTCGACAAATTC 66637 Query 14350 GGCGGCGGAACATTGGATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAG 14409 || ||||| || |||||| ||| || ||| || ||| |||| ||| || || Sbjct 66636 GGAACCGGAAACGGAGAGGAAGGGTACGGCAGCTTCGCCGGCGGTGGCCTTGGCCAGCAG 66577 Query 14410 GGTCTTCCCCGTCCCTGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACC 14466 ||||| || || || || || | ||| | |||||| || |||||| | ||||| Sbjct 66576 CGTCTTACCGGTACCGGGGGGGCCAGAGAGGATGGCACCGCGCGGGATCTTTGCACC 66520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618359495801080