Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20hubeiensis_20[genbank_20GCA_5F001736105.1_202016-09-20] 9,793 sequences; 21,322,328 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq33 378 8e-100 seq62 125 8e-24 seq10 93.3 5e-14 seq7965 89.7 6e-13 >seq33 Length=192376 Score = 378 bits (418), Expect = 8e-100 Identities = 551/767 (72%), Gaps = 14/767 (2%) Strand=Plus/Minus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252 ||||||| |||||| | || |||||||| | ||| | | | | | ||||||||| Sbjct 134513 TCATGCGTGTCGCCGTCGGAATCCACGGCCAGGACATCGAGAGCGCCATCGAGACGTACA 134454 Query 53253 ACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA 53312 || | ||| ||||||||||| || |||||| |||| ||||| |||||||||||||| Sbjct 134453 ACCTCATGTCGCAAAAGTACTTCACCCACGCCTCGCCCACCCTCTTCAACGCTGGTACCC 134394 Query 53313 ATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCA 53372 ||||| ||| | ||| |||||||| || | |||||||| |||||||||||||||| Sbjct 134393 CACACCCGCAGCTCTCGTCGTGCTTCCTTGTCACCATGAAGGACGACTCGATCGACGGCA 134334 Query 53373 TCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCC 53432 ||||||| ||||||||| ||||||| ||||||||| | ||||||||||| || Sbjct 134333 TCTACGACACGCTCAAGACGTGTGCCATGATCTCCAAGACCGCCGGTGGTATCGGCCTCA 134274 Query 53433 ACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATG 53492 || | | |||| | | ||| | || || || ||||| ||| | ||| Sbjct 134273 ACATCCACTGCATCCGCGGTACCGGATCCTACATTGCCGGCACCAACGGTGTCAGCAATG 134214 Query 53493 GAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTG 53552 | ||||| || ||||||||||||||||||||||| || || ||||| |||||||||| Sbjct 134213 GTATCGTCCCCATGCTCCGCGTCTTCAACAACACTGCGCGCTACGTTGACCAGGGTGGCA 134154 Query 53553 GGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGT 53612 |||||| || | |||||||||||| ||||||| |||||| | ||| | | |||| Sbjct 134153 ACAAGCGCCCCGGTGCCTTCGCCATCTACATCGAGCCATGGCACTCGGACGTGTTCGAGT 134094 Query 53613 TTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTT-TAC 53670 | || || || || ||| || || | |||||| |||| ||| ||||| || || ||| Sbjct 134093 TCCTTGACCTCCGCAAGAACCACGGAAAGGAAGAGGTGCG-TGCTCGTGAGCTCTTCTAC 134035 Query 53671 AGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCT 53730 || || ||| | || || ||||||||| | | ||| ||| || ||| || |||| || Sbjct 134034 -GCGCTCTGGGTGCCCGATCTCTTCATGAAGAGGGTCGAGCAGAACGGCGACTGGTCGCT 133976 Query 53731 GATGTGCCCGAACGAGTGCCCCGGCCTC-CAGGGTGTCTACGGTGAGGAGTTTAACGAG- 53788 |||||||| |||||||||||||| ||| | | || |||||| || ||||| |||| Sbjct 133975 CATGTGCCCCAACGAGTGCCCCGGTCTCGCCGACTG-CTACGGCGACGAGTT---CGAGC 133920 Query 53789 --ATGTATCGGACG-TACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAG 53845 | || || || |||| | |||| |||| |||| | |||||||||| || Sbjct 133919 GCCTCTA-CGAGCGCTACGAGGCCGAGGGTCGCTCCAAGCGCACCGTCAAGGCGCAGAAG 133861 Query 53846 GTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAG 53905 | ||| | || |||||| || ||| ||||| || | || | ||| ||||||| Sbjct 133860 CTCTGGTACGCCATCCTCGAGTCGCAGACAGAGACCGGCAACCCCTTCATCCTCTACAAG 133801 Query 53906 GATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTCATCAA 53952 || | | |||| |||||||||||||||||| ||||| ||||| Sbjct 133800 GACGCTGCCAACCGAAAGAGCAACCAGAAGAACCTCGGCACTATCAA 133754 Score = 185 bits (204), Expect = 1e-41 Identities = 538/815 (66%), Gaps = 44/815 (5%) Strand=Plus/Minus Query 55138 GAACCTGAACCGGGTCATCGACAAGAATTACTACCCGACTGAAGCGGCGCGCAAGTCCAA 55197 |||||| ||| | ||||||||| || |||||||| || | ||| |||| |||||| Sbjct 133597 GAACCTCAACAAGATCATCGACATCAACTACTACCCCGTCGAGGAGGCCCGCAGGTCCAA 133538 Query 55198 CCTCCGGCACCGGCCCATCGCCATCGGTGTACAGGGCTTGGCCGACATCTTCATGATGCT 55257 | | || || || || |||| ||||||||| ||||| | |||||| ||||||||| | Sbjct 133537 CATGCGCCATCGCCCTATCGGCATCGGTGTCCAGGGTCTCGCCGACGCCTTCATGATCAT 133478 Query 55258 CGGATTGCCCTTCGACTCGGAACCTGCTCGAGAAATTAACCAGGACATCTTC-AGTCGCA 55316 || | ||||||| ||| ||||| | ||| | | |||||| || | || Sbjct 133477 GGGCTACGCCTTCGAATCGCCCGAGGCTCGCCGTCTCAACGTGCAGATCTTCGAGAC-CA 133419 Query 55317 TCTACTTTGCAGCGCTCGAGGAGTCGTGTCATCTGGCT-ATGAGCGAGGGGACCTACGAG 55375 ||||| || || |||||| ||||| | ||||| | |||| | || ||||||||| Sbjct 133418 TCTACCACGCCGCCCTCGAGCGATCGTGCGAGCTGGCCCAGGAGC-ACGGCACCTACGAG 133360 Query 55376 ACGTTCCGTGATTCGCCAGCTGACAAGGGACTTCTCCAGTTCGATCTATGGGGC---AAG 55432 || | | | ||||| || |||| || |||| ||| | |||||| | | Sbjct 133359 ACCTACGCAGGCTCGCCCGCCTCGCAGGGCGAGCTGCAGTACGACATGTGGGGCGTCACG 133300 Query 55433 TCTGACCCCATGTTTGACA------AGTTGAAG--CATGACATTCACTT-GTGGGGCCTA 55483 || | | ||| ||| || | ||| || || || || | || || Sbjct 133299 CCTTCCGACCTGTGGGACTGGGCTGAGCTCAAGACCAAGA---TCGCTAAGCACGGTCTC 133243 Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543 |||||||| ||||| ||||||| ||||| ||||| ||||| ||||||| | ||| | Sbjct 133242 CGCAACTCGCTGCTGTTGGCGCCCATGCCTACCGCTTCGACCAGTCAGATCCTCGGCTTC 133183 Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAG 55603 |||||| ||||||||||||||| ||||||||||| ||| || || || ||||| Sbjct 133182 AACGAGTGCTTCGAGCCGTACACGTCCAACATCTACTCGCGTCGTGTGCTCGCCGGTGAA 133123 Query 55604 TTTGTCATGATCAACAAGCACCTCGT-------CAAGGACCTGCAG-AAGATCAACAAGT 55655 || || |||| | ||| || | || | | || | | || || Sbjct 133122 TTCCAGGTGGTCAA----CCCCTGGTTGCTTCGCGAGCTCGTCGAGCAGGGTC----TGT 133071 Query 55656 GGAACCCGCAGATCAAGA--CGGAT-ATTGTGCGGAACGGGGGGTCCGTCCAGAATCTG- 55711 ||||| ||| |||| || || || | | |||| || ||| ||||||| || Sbjct 133070 GGAACGACACGATGAAGAACCGCATCATCGCCC---ACGGCGGTTCCATCCAGAACGTGC 133014 Query 55712 --GAGATTCCTCTGCGTCTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGA 55769 | || || || ||||| || | ||| ||| || |||||||| |||||| Sbjct 133013 CCGGCATCCCCGACCGCATCAAGAAGCTGTACAAGACTGTCTGGGAGATCAGCCAGAAGG 132954 Query 55770 GTCTGATTGACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACA 55829 | || |||||| ||| || |||||||| | |||| |||||| ||||| || |||| Sbjct 132953 CCATCATCGACATGGCTGCCGACCGTGGTGCTTTCATCTGCCAGTCGCAGTCGCTCAACA 132894 Query 55830 TCTTCATGGAGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGA 55889 || | | | || | | | || | | |||||||||||||||||| ||||||| Sbjct 132893 TCCACCTCTCGGCGCCCACGTTCGGTCAGCTCACCTCGATGCACTTTTACGGCTGGAAGA 132834 Query 55890 AGGGACTCAAGACGGGTATGTACTATCTGCGGACC 55924 |||| |||||||| || | |||||| ||||| ||| Sbjct 132833 AGGGTCTCAAGACCGGCACGTACTACCTGCGTACC 132799 >seq62 Length=98030 Score = 125 bits (138), Expect = 8e-24 Identities = 531/826 (64%), Gaps = 26/826 (3%) Strand=Plus/Plus Query 74456 CTTTGAATAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTT 74515 ||||| || || ||||| ||| || || ||||||||||| |||| ||| |||||| Sbjct 36852 CTTTGCGTACTCGGCGACCTTCTTCTCGAAGAAGTTGGTCTTGCCTTGCAAGCTGATGTT 36911 Query 74516 CTCCATCCAGTCGAAAGGGTTCTTTGCACCGTA---AATAGGCTTCTCCCCAAACTGTGC 74572 |||||| ||||||| ||||| |||| ||||| || ||| || || | | | Sbjct 36912 CTCCATAAAGTCGAAGGGGTTTGTTGCGCCGTAGTGAACAGGGTTG---CCGAGCGAGAC 36968 Query 74573 CATGAGGCGATCCGCCACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGAT 74632 || ||||| || || || | | ||||| || ||| | || | ||||||||| Sbjct 36969 CAAAAGGCGGTCTGCAACGTACTCGATGTATTGACGCATGAGCGCGGCGTTCATGCCGAT 37028 Query 74633 GAGTTTGCACGGCAGTGCCTCGGTGATAAACTCACTCTCCACCTCGCAAGCCCATTGGAC 74692 | || |||| ||| || |||| || | |||| | |||| ||| || Sbjct 37029 CAAGCTGACAGGCAATGCGTCTGTGAGGAAGGCCTTCTCGATCTCGACGGCCTCGCTGAT 37088 Query 74693 AATCTTGTGAAT-GTCTTTGGAAGGGCACTTTTCCCTCAGGTGAGAGTAAAGC-GTCACG 74750 |||||| | | || | || | || | ||| | ||||| | | || | || | Sbjct 37089 GATCTTGAGCACCGTGTCGGGGTGTGCGCGCTTCT-TGAGGTGGCTGAAGAGGAGGCA-G 37146 Query 74751 GCAAACTCCTGATGCGAG--CCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGC 74808 ||||| || | || || || || || | || | || || || || | || | Sbjct 37147 GCAAAGTC--GGTGTGAAGACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTGAGAC 37204 Query 74809 CAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGA 74868 | ||||| || ||||||||||| | ||| ||||||| |||||||||| |||||||| Sbjct 37205 CGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAACCAGAGAAGAAGA 37264 Query 74869 TGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATCGGAAGTC---- 74924 |||| ||||| |||||||||| || || | || || |||| || ||| Sbjct 37265 TGCCCTCGACGGCAGCAAAGGCGATGAGACGCTCTGC-AAAGGTGGCGCGCTTGTCGCTG 37323 Query 74925 ATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGG 74984 ||||| ||||||| || || || | ||||| | |||| || |||| || | Sbjct 37324 ATCCATCGAAGAGCCCAGTCGGCCTTCTGCTTGACGACGGGGATGGTCTCGACGGCGTCA 37383 Query 74985 AAGAGGCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTC 75044 |||||| | | || || || || || | |||| || | || ||||| || Sbjct 37384 AAGAGGAATTCGCGCTGCTCTGGTTCGCGGATGTAGGTGTCGATGAGGAGCGAGTAGGTT 37443 Query 75045 TCCGAATGAATCGACTCGTTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATC 75104 ||||| || || ||| | | |||| | ||||||| | || ||||| || | Sbjct 37444 TCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAACGGGCCTCGGCGGCC 37503 Query 75105 TGTACATCC--TTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGG 75162 || || ||| |||| || | ||| ||||| ||||||||||||| || |||| Sbjct 37504 TGAACTTCCGAGCTGAATCGCTC--GACGAGGTTCTCGTTGACGATGCCGTCGGAAGCGG 37561 Query 75163 CGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCATCGTCAGTGAG---TTTGTCCC 75219 |||| || || || || ||| ||||||||||| | ||| |||| ||||||| Sbjct 37562 CGAAGAAGGCGAGAACGTGGGAGATGAAGTGGCGCTCGTTGTCGTTGAGCTTGTTGTCCC 37621 Query 75220 AATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCGTCCAGAA 75265 | || | |||||| | | || |||||||| | |||||||| Sbjct 37622 AGTCGTGGAGGTCCTTGGAAAGGTCGATCTCCTCTGCGGTCCAGAA 37667 >seq10 Length=380723 Score = 93.3 bits (102), Expect = 5e-14 Identities = 265/404 (66%), Gaps = 15/404 (4%) Strand=Plus/Minus Query 152769 GTTGAGGACCAAGCCCTTGATGTGCGATCCGTCAAGATCCGCGTCGGTCATGATCATCAG 152828 ||||| || | || ||||||||||| || || ||||| |||||||||||||| | Sbjct 327768 GTTGATGATGAGACCTTTGATGTGCGAACCATCGTGATCCTGATCGGTCATGATCATGAT 327709 Query 152829 ACGACCGTAGCGCA----GGTCACGTAGTGACCCGTAGACCTTTCCATGTTGAAGCCCGA 152884 || |||||||||| | | || | | || || ||| || || ||||| || | Sbjct 327708 ACTGCCGTAGCGCAAGCTGTTGACATCGAGA----TACTGCTTGCCGTGCTGAAGACCAA 327653 Query 152885 GGATCTTTTTGAGG---TTGGAAAATTCCTCATTATCGGTCACCTGTTTCACCGTGGCAT 152941 |||||| |||| | ||| | ||| |||| | | | ||| | || ||| | Sbjct 327652 GGATCTCCTTGATGGCCTTG---ATTTCGGCATTCTTCATGATCTGATCGTGCGAGGCTT 327596 Query 152942 CCCGAACATTGCGCGGCTTTCCCCGGAGTGGAAACACGCCGAACGCGTTGCGGCCTACAA 153001 | || || ||| | |||| || ||||| || || || ||| | || || || || Sbjct 327595 CTCGCACGTTGAGGAGCTTACCACGGAGCGGGAAAACACCGTAATTGTCTCGTCCGACCT 327536 Query 153002 CGCTCAGACCGGCAATAGCAAGGGCTTTCGCCGAGTCACCCTCGGTGATAATAAGCGTAC 153061 || | ||| || | ||| || | || ||||| ||||| || |||| || ||||||| Sbjct 327535 CGACGATACCAGCCACAGCGAGCGACTTGGCCGAATCACCTTCCGTGAGGATGAGCGTAC 327476 Query 153062 AGTCGTGAGACCGATGAGTACCGGCCCAGTTGGCGTCGTCAAGCTTGGGGATTCCCGTGA 153121 | || | | | |||||| |||||| || || ||||||||||| |||| Sbjct 327475 AATCTTTGGCCTTCCTGCCACCGGCGTTGTTGGCATCTTCGAGCTTGGGGATGTTGGTGA 327416 Query 153122 TCCTGCTTTTCTTAGAGCCGTCGGTTTTCTTCAGTTCCTTGGTC 153165 ||||| | ||| |||||||| ||||| || || ||||| Sbjct 327415 TCCTGGTGCGCTTGTGACCGTCGGTCTTCTTGAGCGCC-TGGTC 327373 Score = 91.5 bits (100), Expect = 2e-13 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 119083 GTTGGCTAGCTTGGCACCGTATCCGTTCCGACCACCGGTCACGCGCTGCTCCTCGTCGTT 119142 |||||| || ||||||||||| ||||| |||||||| || || ||| | ||||| Sbjct 326559 GTTGGCGAGTTTGGCACCGTAACCGTTACGACCACCAGTGACCTTGGCCTCGTTGTCGTC 326500 Query 119143 GTAGTTGGAGCTGGTCAAAAGGTGCCCAAAGATGAGCTCGGGGAT 119187 ||||||||| ||| | ||||| |||||||||||||||||||| Sbjct 326499 GTAGTTGGACGAGGTGAGGAGGTGGCCAAAGATGAGCTCGGGGAT 326455 >seq7965 Length=216 Score = 89.7 bits (98), Expect = 6e-13 Identities = 90/117 (77%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 55138 GAACCTGAACCGGGTCATCGACAAGAATTACTACCCGACTGAAGCGGCGCGCAAGTCCAA 55197 |||||||||| | ||||||||| || ||||| ||| || | ||||||||||||||| Sbjct 19 GAACCTGAACAAGATCATCGACATTAACTACTATCCGGTCGAGGAGGCGCGCAAGTCCAA 78 Query 55198 CCTCCGGCACCGGCCCATCGCCATCGGTGTACAGGGCTTGGCCGACATCTTCATGAT 55254 | | || ||||| || |||| |||||||| |||||| | || || |||||||| Sbjct 79 CATGCGTCACCGTCCGATCGGGATCGGTGTTCAGGGCCTTGCGGATGCGTTCATGAT 135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547149013921400