Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudozyma_20hubeiensis_20[genbank_20GCA_5F001736105.1_202016-09-20]
9,793 sequences; 21,322,328 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq33 378 8e-100
seq62 125 8e-24
seq10 93.3 5e-14
seq7965 89.7 6e-13
>seq33
Length=192376
Score = 378 bits (418), Expect = 8e-100
Identities = 551/767 (72%), Gaps = 14/767 (2%)
Strand=Plus/Minus
Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252
||||||| |||||| | || |||||||| | ||| | | | | | |||||||||
Sbjct 134513 TCATGCGTGTCGCCGTCGGAATCCACGGCCAGGACATCGAGAGCGCCATCGAGACGTACA 134454
Query 53253 ACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA 53312
|| | ||| ||||||||||| || |||||| |||| ||||| ||||||||||||||
Sbjct 134453 ACCTCATGTCGCAAAAGTACTTCACCCACGCCTCGCCCACCCTCTTCAACGCTGGTACCC 134394
Query 53313 ATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCA 53372
||||| ||| | ||| |||||||| || | |||||||| ||||||||||||||||
Sbjct 134393 CACACCCGCAGCTCTCGTCGTGCTTCCTTGTCACCATGAAGGACGACTCGATCGACGGCA 134334
Query 53373 TCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCC 53432
||||||| ||||||||| ||||||| ||||||||| | ||||||||||| ||
Sbjct 134333 TCTACGACACGCTCAAGACGTGTGCCATGATCTCCAAGACCGCCGGTGGTATCGGCCTCA 134274
Query 53433 ACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATG 53492
|| | | |||| | | ||| | || || || ||||| ||| | |||
Sbjct 134273 ACATCCACTGCATCCGCGGTACCGGATCCTACATTGCCGGCACCAACGGTGTCAGCAATG 134214
Query 53493 GAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTG 53552
| ||||| || ||||||||||||||||||||||| || || ||||| ||||||||||
Sbjct 134213 GTATCGTCCCCATGCTCCGCGTCTTCAACAACACTGCGCGCTACGTTGACCAGGGTGGCA 134154
Query 53553 GGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGT 53612
|||||| || | |||||||||||| ||||||| |||||| | ||| | | ||||
Sbjct 134153 ACAAGCGCCCCGGTGCCTTCGCCATCTACATCGAGCCATGGCACTCGGACGTGTTCGAGT 134094
Query 53613 TTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTT-TAC 53670
| || || || || ||| || || | |||||| |||| ||| ||||| || || |||
Sbjct 134093 TCCTTGACCTCCGCAAGAACCACGGAAAGGAAGAGGTGCG-TGCTCGTGAGCTCTTCTAC 134035
Query 53671 AGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCT 53730
|| || ||| | || || ||||||||| | | ||| ||| || ||| || |||| ||
Sbjct 134034 -GCGCTCTGGGTGCCCGATCTCTTCATGAAGAGGGTCGAGCAGAACGGCGACTGGTCGCT 133976
Query 53731 GATGTGCCCGAACGAGTGCCCCGGCCTC-CAGGGTGTCTACGGTGAGGAGTTTAACGAG- 53788
|||||||| |||||||||||||| ||| | | || |||||| || ||||| ||||
Sbjct 133975 CATGTGCCCCAACGAGTGCCCCGGTCTCGCCGACTG-CTACGGCGACGAGTT---CGAGC 133920
Query 53789 --ATGTATCGGACG-TACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAG 53845
| || || || |||| | |||| |||| |||| | |||||||||| ||
Sbjct 133919 GCCTCTA-CGAGCGCTACGAGGCCGAGGGTCGCTCCAAGCGCACCGTCAAGGCGCAGAAG 133861
Query 53846 GTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAG 53905
| ||| | || |||||| || ||| ||||| || | || | ||| |||||||
Sbjct 133860 CTCTGGTACGCCATCCTCGAGTCGCAGACAGAGACCGGCAACCCCTTCATCCTCTACAAG 133801
Query 53906 GATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTCATCAA 53952
|| | | |||| |||||||||||||||||| ||||| |||||
Sbjct 133800 GACGCTGCCAACCGAAAGAGCAACCAGAAGAACCTCGGCACTATCAA 133754
Score = 185 bits (204), Expect = 1e-41
Identities = 538/815 (66%), Gaps = 44/815 (5%)
Strand=Plus/Minus
Query 55138 GAACCTGAACCGGGTCATCGACAAGAATTACTACCCGACTGAAGCGGCGCGCAAGTCCAA 55197
|||||| ||| | ||||||||| || |||||||| || | ||| |||| ||||||
Sbjct 133597 GAACCTCAACAAGATCATCGACATCAACTACTACCCCGTCGAGGAGGCCCGCAGGTCCAA 133538
Query 55198 CCTCCGGCACCGGCCCATCGCCATCGGTGTACAGGGCTTGGCCGACATCTTCATGATGCT 55257
| | || || || || |||| ||||||||| ||||| | |||||| ||||||||| |
Sbjct 133537 CATGCGCCATCGCCCTATCGGCATCGGTGTCCAGGGTCTCGCCGACGCCTTCATGATCAT 133478
Query 55258 CGGATTGCCCTTCGACTCGGAACCTGCTCGAGAAATTAACCAGGACATCTTC-AGTCGCA 55316
|| | ||||||| ||| ||||| | ||| | | |||||| || | ||
Sbjct 133477 GGGCTACGCCTTCGAATCGCCCGAGGCTCGCCGTCTCAACGTGCAGATCTTCGAGAC-CA 133419
Query 55317 TCTACTTTGCAGCGCTCGAGGAGTCGTGTCATCTGGCT-ATGAGCGAGGGGACCTACGAG 55375
||||| || || |||||| ||||| | ||||| | |||| | || |||||||||
Sbjct 133418 TCTACCACGCCGCCCTCGAGCGATCGTGCGAGCTGGCCCAGGAGC-ACGGCACCTACGAG 133360
Query 55376 ACGTTCCGTGATTCGCCAGCTGACAAGGGACTTCTCCAGTTCGATCTATGGGGC---AAG 55432
|| | | | ||||| || |||| || |||| ||| | |||||| | |
Sbjct 133359 ACCTACGCAGGCTCGCCCGCCTCGCAGGGCGAGCTGCAGTACGACATGTGGGGCGTCACG 133300
Query 55433 TCTGACCCCATGTTTGACA------AGTTGAAG--CATGACATTCACTT-GTGGGGCCTA 55483
|| | | ||| ||| || | ||| || || || || | || ||
Sbjct 133299 CCTTCCGACCTGTGGGACTGGGCTGAGCTCAAGACCAAGA---TCGCTAAGCACGGTCTC 133243
Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543
|||||||| ||||| ||||||| ||||| ||||| ||||| ||||||| | ||| |
Sbjct 133242 CGCAACTCGCTGCTGTTGGCGCCCATGCCTACCGCTTCGACCAGTCAGATCCTCGGCTTC 133183
Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAG 55603
|||||| ||||||||||||||| ||||||||||| ||| || || || |||||
Sbjct 133182 AACGAGTGCTTCGAGCCGTACACGTCCAACATCTACTCGCGTCGTGTGCTCGCCGGTGAA 133123
Query 55604 TTTGTCATGATCAACAAGCACCTCGT-------CAAGGACCTGCAG-AAGATCAACAAGT 55655
|| || |||| | ||| || | || | | || | | || ||
Sbjct 133122 TTCCAGGTGGTCAA----CCCCTGGTTGCTTCGCGAGCTCGTCGAGCAGGGTC----TGT 133071
Query 55656 GGAACCCGCAGATCAAGA--CGGAT-ATTGTGCGGAACGGGGGGTCCGTCCAGAATCTG- 55711
||||| ||| |||| || || || | | |||| || ||| ||||||| ||
Sbjct 133070 GGAACGACACGATGAAGAACCGCATCATCGCCC---ACGGCGGTTCCATCCAGAACGTGC 133014
Query 55712 --GAGATTCCTCTGCGTCTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGA 55769
| || || || ||||| || | ||| ||| || |||||||| ||||||
Sbjct 133013 CCGGCATCCCCGACCGCATCAAGAAGCTGTACAAGACTGTCTGGGAGATCAGCCAGAAGG 132954
Query 55770 GTCTGATTGACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACA 55829
| || |||||| ||| || |||||||| | |||| |||||| ||||| || ||||
Sbjct 132953 CCATCATCGACATGGCTGCCGACCGTGGTGCTTTCATCTGCCAGTCGCAGTCGCTCAACA 132894
Query 55830 TCTTCATGGAGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGA 55889
|| | | | || | | | || | | |||||||||||||||||| |||||||
Sbjct 132893 TCCACCTCTCGGCGCCCACGTTCGGTCAGCTCACCTCGATGCACTTTTACGGCTGGAAGA 132834
Query 55890 AGGGACTCAAGACGGGTATGTACTATCTGCGGACC 55924
|||| |||||||| || | |||||| ||||| |||
Sbjct 132833 AGGGTCTCAAGACCGGCACGTACTACCTGCGTACC 132799
>seq62
Length=98030
Score = 125 bits (138), Expect = 8e-24
Identities = 531/826 (64%), Gaps = 26/826 (3%)
Strand=Plus/Plus
Query 74456 CTTTGAATAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTT 74515
||||| || || ||||| ||| || || ||||||||||| |||| ||| ||||||
Sbjct 36852 CTTTGCGTACTCGGCGACCTTCTTCTCGAAGAAGTTGGTCTTGCCTTGCAAGCTGATGTT 36911
Query 74516 CTCCATCCAGTCGAAAGGGTTCTTTGCACCGTA---AATAGGCTTCTCCCCAAACTGTGC 74572
|||||| ||||||| ||||| |||| ||||| || ||| || || | | |
Sbjct 36912 CTCCATAAAGTCGAAGGGGTTTGTTGCGCCGTAGTGAACAGGGTTG---CCGAGCGAGAC 36968
Query 74573 CATGAGGCGATCCGCCACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGAT 74632
|| ||||| || || || | | ||||| || ||| | || | |||||||||
Sbjct 36969 CAAAAGGCGGTCTGCAACGTACTCGATGTATTGACGCATGAGCGCGGCGTTCATGCCGAT 37028
Query 74633 GAGTTTGCACGGCAGTGCCTCGGTGATAAACTCACTCTCCACCTCGCAAGCCCATTGGAC 74692
| || |||| ||| || |||| || | |||| | |||| ||| ||
Sbjct 37029 CAAGCTGACAGGCAATGCGTCTGTGAGGAAGGCCTTCTCGATCTCGACGGCCTCGCTGAT 37088
Query 74693 AATCTTGTGAAT-GTCTTTGGAAGGGCACTTTTCCCTCAGGTGAGAGTAAAGC-GTCACG 74750
|||||| | | || | || | || | ||| | ||||| | | || | || |
Sbjct 37089 GATCTTGAGCACCGTGTCGGGGTGTGCGCGCTTCT-TGAGGTGGCTGAAGAGGAGGCA-G 37146
Query 74751 GCAAACTCCTGATGCGAG--CCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGC 74808
||||| || | || || || || || | || | || || || || | || |
Sbjct 37147 GCAAAGTC--GGTGTGAAGACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAGGTGAGAC 37204
Query 74809 CAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGA 74868
| ||||| || ||||||||||| | ||| ||||||| |||||||||| ||||||||
Sbjct 37205 CGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAACCAGAGAAGAAGA 37264
Query 74869 TGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATCGGAAGTC---- 74924
|||| ||||| |||||||||| || || | || || |||| || |||
Sbjct 37265 TGCCCTCGACGGCAGCAAAGGCGATGAGACGCTCTGC-AAAGGTGGCGCGCTTGTCGCTG 37323
Query 74925 ATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGG 74984
||||| ||||||| || || || | ||||| | |||| || |||| || |
Sbjct 37324 ATCCATCGAAGAGCCCAGTCGGCCTTCTGCTTGACGACGGGGATGGTCTCGACGGCGTCA 37383
Query 74985 AAGAGGCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTC 75044
|||||| | | || || || || || | |||| || | || ||||| ||
Sbjct 37384 AAGAGGAATTCGCGCTGCTCTGGTTCGCGGATGTAGGTGTCGATGAGGAGCGAGTAGGTT 37443
Query 75045 TCCGAATGAATCGACTCGTTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATC 75104
||||| || || ||| | | |||| | ||||||| | || ||||| || |
Sbjct 37444 TCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAACGGGCCTCGGCGGCC 37503
Query 75105 TGTACATCC--TTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGG 75162
|| || ||| |||| || | ||| ||||| ||||||||||||| || ||||
Sbjct 37504 TGAACTTCCGAGCTGAATCGCTC--GACGAGGTTCTCGTTGACGATGCCGTCGGAAGCGG 37561
Query 75163 CGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCATCGTCAGTGAG---TTTGTCCC 75219
|||| || || || || ||| ||||||||||| | ||| |||| |||||||
Sbjct 37562 CGAAGAAGGCGAGAACGTGGGAGATGAAGTGGCGCTCGTTGTCGTTGAGCTTGTTGTCCC 37621
Query 75220 AATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCGTCCAGAA 75265
| || | |||||| | | || |||||||| | ||||||||
Sbjct 37622 AGTCGTGGAGGTCCTTGGAAAGGTCGATCTCCTCTGCGGTCCAGAA 37667
>seq10
Length=380723
Score = 93.3 bits (102), Expect = 5e-14
Identities = 265/404 (66%), Gaps = 15/404 (4%)
Strand=Plus/Minus
Query 152769 GTTGAGGACCAAGCCCTTGATGTGCGATCCGTCAAGATCCGCGTCGGTCATGATCATCAG 152828
||||| || | || ||||||||||| || || ||||| |||||||||||||| |
Sbjct 327768 GTTGATGATGAGACCTTTGATGTGCGAACCATCGTGATCCTGATCGGTCATGATCATGAT 327709
Query 152829 ACGACCGTAGCGCA----GGTCACGTAGTGACCCGTAGACCTTTCCATGTTGAAGCCCGA 152884
|| |||||||||| | | || | | || || ||| || || ||||| || |
Sbjct 327708 ACTGCCGTAGCGCAAGCTGTTGACATCGAGA----TACTGCTTGCCGTGCTGAAGACCAA 327653
Query 152885 GGATCTTTTTGAGG---TTGGAAAATTCCTCATTATCGGTCACCTGTTTCACCGTGGCAT 152941
|||||| |||| | ||| | ||| |||| | | | ||| | || ||| |
Sbjct 327652 GGATCTCCTTGATGGCCTTG---ATTTCGGCATTCTTCATGATCTGATCGTGCGAGGCTT 327596
Query 152942 CCCGAACATTGCGCGGCTTTCCCCGGAGTGGAAACACGCCGAACGCGTTGCGGCCTACAA 153001
| || || ||| | |||| || ||||| || || || ||| | || || || ||
Sbjct 327595 CTCGCACGTTGAGGAGCTTACCACGGAGCGGGAAAACACCGTAATTGTCTCGTCCGACCT 327536
Query 153002 CGCTCAGACCGGCAATAGCAAGGGCTTTCGCCGAGTCACCCTCGGTGATAATAAGCGTAC 153061
|| | ||| || | ||| || | || ||||| ||||| || |||| || |||||||
Sbjct 327535 CGACGATACCAGCCACAGCGAGCGACTTGGCCGAATCACCTTCCGTGAGGATGAGCGTAC 327476
Query 153062 AGTCGTGAGACCGATGAGTACCGGCCCAGTTGGCGTCGTCAAGCTTGGGGATTCCCGTGA 153121
| || | | | |||||| |||||| || || ||||||||||| ||||
Sbjct 327475 AATCTTTGGCCTTCCTGCCACCGGCGTTGTTGGCATCTTCGAGCTTGGGGATGTTGGTGA 327416
Query 153122 TCCTGCTTTTCTTAGAGCCGTCGGTTTTCTTCAGTTCCTTGGTC 153165
||||| | ||| |||||||| ||||| || || |||||
Sbjct 327415 TCCTGGTGCGCTTGTGACCGTCGGTCTTCTTGAGCGCC-TGGTC 327373
Score = 91.5 bits (100), Expect = 2e-13
Identities = 83/105 (79%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 119083 GTTGGCTAGCTTGGCACCGTATCCGTTCCGACCACCGGTCACGCGCTGCTCCTCGTCGTT 119142
|||||| || ||||||||||| ||||| |||||||| || || ||| | |||||
Sbjct 326559 GTTGGCGAGTTTGGCACCGTAACCGTTACGACCACCAGTGACCTTGGCCTCGTTGTCGTC 326500
Query 119143 GTAGTTGGAGCTGGTCAAAAGGTGCCCAAAGATGAGCTCGGGGAT 119187
||||||||| ||| | ||||| ||||||||||||||||||||
Sbjct 326499 GTAGTTGGACGAGGTGAGGAGGTGGCCAAAGATGAGCTCGGGGAT 326455
>seq7965
Length=216
Score = 89.7 bits (98), Expect = 6e-13
Identities = 90/117 (77%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 55138 GAACCTGAACCGGGTCATCGACAAGAATTACTACCCGACTGAAGCGGCGCGCAAGTCCAA 55197
|||||||||| | ||||||||| || ||||| ||| || | |||||||||||||||
Sbjct 19 GAACCTGAACAAGATCATCGACATTAACTACTATCCGGTCGAGGAGGCGCGCAAGTCCAA 78
Query 55198 CCTCCGGCACCGGCCCATCGCCATCGGTGTACAGGGCTTGGCCGACATCTTCATGAT 55254
| | || ||||| || |||| |||||||| |||||| | || || ||||||||
Sbjct 79 CATGCGTCACCGTCCGATCGGGATCGGTGTTCAGGGCCTTGCGGATGCGTTCATGAT 135
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547149013921400
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