Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20hubeiensis_20[genbank_20GCA_5F001736105.1_202016-09-20] 9,793 sequences; 21,322,328 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq1 107 2e-18 >seq1 Length=1046041 Score = 107 bits (118), Expect = 2e-18 Identities = 161/224 (72%), Gaps = 6/224 (3%) Strand=Plus/Minus Query 29828 ATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACG 29887 ||||||| ||||| ||||| || |||||||| ||||| ||||| ||| |||||| Sbjct 749249 ATCCTCAACGTGGGGAAGGGCAGCGGATCCCTCTCCAGCTGCACCTTCAACGGCTCCACG 749190 Query 29888 TTATCCAGGTAGACGTGAGCGTCTCCCAGGTTGTGGACA--AACTCTCCCGGTTC-TAGC 29944 | ||| ||| || ||||||||||||| | | ||| |||||| ||||| || Sbjct 749189 TGGTCCTTGTATACATGAGCGTCTCCCA--TCGCCAACACCAACTCTTTGGGTTCGCAGT 749132 Query 29945 CCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACC 30004 || ||||| | || |||||||| || | |||| ||||||||| ||||| || ||||| Sbjct 749131 CC-GTGACTTTGGCGATCATGTAGGTCAACAGAGCGTAGCTGGCAATGTTGAACGGTACG 749073 Query 30005 CCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAG 30048 || || || | || | | |||||| | ||| |||||||| Sbjct 749072 CCTAGTCCGAGATCGCAGCTGCGCTGGTACATCTGGCACGAGAG 749029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406261905964956