Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20hubeiensis_20[genbank_20GCA_5F001736105.1_202016-09-20] 9,793 sequences; 21,322,328 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq2 109 3e-19 >seq2 Length=781092 Score = 109 bits (120), Expect = 3e-19 Identities = 157/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 |||||||| || | ||||| ||| |||||||||||||| || || ||||| || || Sbjct 629697 AGACGCAAGACAAGGTGGAGTGTGGATTCCTTTTGAATGTTGTAGTCGGAAAGGGTGCGG 629638 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 ||||||| || || || ||||| || |||| ||||| || || || || | || ||| Sbjct 629637 CCGTCTTCGAGCTGCTTGCCGGCGAAGATTAGGCGCTGCTGATCAGGGGGAATGCCTTCC 629578 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| |||| || | ||| ||| | ||| ||||| ||| || || | ||| Sbjct 629577 TTGTCCTGGATC-TTGGCTTTGACGTTGTCAATGGTGTCCGACGACTCAACCTCGAGGGT 629519 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || ||||| || || || ||||| |||||||| Sbjct 629518 AATGGTCTTGCCGGTCAAGGTCTTGACAAAGATCTGCAT 629480 Score = 104 bits (114), Expect = 1e-17 Identities = 154/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 34492 CGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCG 34551 |||||||| | || || |||||||||||||||||||| ||||| || || || | Sbjct 629922 CGCAACACAAGGTGAAGGGTGCTCTCCTTTTGAATGTTGTAATCGCTCAGGGTGCGACCA 629863 Query 34552 TCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTG 34611 || || || || ||||| ||||| || | ||||| ||||| || || | || |||||| Sbjct 629862 TCCTCGAGCTGCTTACCAGCAAAGATGAGTCGCTGCTGGTCGGGAGGGATACCTTCCTTG 629803 Query 34612 TCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTAT 34670 || ||| ||| | || ||| | ||| ||||| ||| ||||||| ||| || Sbjct 629802 TCCTGGAT-TTTGGCCTTGACGTTGTCAATCGTGTCCGAAGACTCGACTTCCAAGGTGAT 629744 Query 34671 CGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || || | ||| || || ||||||||||| Sbjct 629743 GGTCTTTCCTGTGAGCGTCTTGACGAAAATCTGCAT 629708 Score = 102 bits (112), Expect = 5e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 ||||| | ||||| | || | || |||||||||||||| || ||||| || || || Sbjct 630162 CCGCCACGCAGACGGAGGACGAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAC 630103 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 ||||| || | || || || || ||||| ||||| || | ||||| ||||| || || Sbjct 630102 AGTGTACGACCATCCTCGAGCTGCTTACCAGCAAAGATGAGTCGCTGCTGGTCGGGTGGG 630043 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||||||||||| |||| || | || || | || |||||| ||| || Sbjct 630042 ATACCCTCCTTGTCCTGGATC-TTGGCCTTGACATTGTCGATCGTGTCTGAAGACTCGAC 629984 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| || ||||| || ||||| | || || || ||||||||||| Sbjct 629983 TTCCAACGTGATCGTCTTGCCGGTGAGTGTCTTGACGAAAATCTGCAT 629936 Score = 96.9 bits (106), Expect = 2e-15 Identities = 155/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||||| ||||| || |||||| || ||||| || || || || ||||| Sbjct 629469 AGACGGAGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTTCGT 629410 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||| || || || || ||||| || || | |||||| ||||| || || | |||||| Sbjct 629409 CCGTCCTCGAGCTGCTTTCCGGCGAAAATGAGACGCTGCTGGTCAGGAGGGATGCCCTCC 629350 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| |||| || | || ||| | ||| ||||| |||||| || | ||| Sbjct 629349 TTGTCCTGGATC-TTGGCCTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCGAGGGT 629291 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || || || ||||| | || || || || ||||||||| Sbjct 629290 GATAGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCATG 629251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314692036333769