Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20hubeiensis_20[genbank_20GCA_5F001736105.1_202016-09-20] 9,793 sequences; 21,322,328 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq2 98.7 9e-16 >seq2 Length=781092 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 ||||| | || || ||||| | || || |||||||| ||||| || || |||||| Sbjct 629934 CCTCCGCGCAATCGCAACACAAGGTGAAGGGTGCTCTCCTTTTGAATGTTGTAATCGCTC 629875 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 || || || | || || ||||| || || ||||| || || ||||||||||||| || Sbjct 629874 AGGGTGCGACCATCCTCGAGCTGCTTACCAGCAAAGATGAGTCGCTGCTGGTCGGGAGGG 629815 Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCAC 39236 | | || |||||| |||||| |||| ||| | | | ||| || ||||| || Sbjct 629814 ATACCTTCCTTGTCCTGGATTTTGGCCTTGA-CGTTGTCAATCGTGTCCGAAGACTCGAC 629756 Query 39237 GTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 |||| ||||| | ||||| || ||||| || || || || ||||| Sbjct 629755 TTCCAAGGTGATGGTCTTTCCTGTGAGCGTCTTGACGAAAATCTGCAT 629708 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 ||||| || || || ||| || || || || || || | || |||||| |||| || Sbjct 629460 ACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTTCGTCCGTCCTCG 629401 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| || || || || || |||||||||||||| | || | || ||| |||||| | Sbjct 629400 AGCTGCTTTCCGGCGAAAATGAGACGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGG 629341 Query 39196 ATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 || || |||| ||| | | | || ||| |||||||| || | |||||| | || Sbjct 629340 ATCTTGGCCTTGA-CGTTGTCAATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTT 629282 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || ||||| || || || ||||| ||||| Sbjct 629281 GCCGGTCAGAGTCTTGACGAAGATCTGCAT 629252 Score = 82.4 bits (90), Expect = 7e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || |||||||| || || || || || |||| ||||| || | || || ||||| Sbjct 630138 TGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGTGTACGACCATCCTCGAGCTGC 630079 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 || || ||||| || || ||||||||||||| || | | ||| |||||| ||| || Sbjct 630078 TTACCAGCAAAGATGAGTCGCTGCTGGTCGGGTGGGATACCCTCCTTGTCCTGGATCTTG 630019 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 |||| | | | ||| || ||||| || |||| |||||| | || || || Sbjct 630018 GCCTTGACATTGTCGATCGTGTCTGAAGACTCGACTTCCAACGTGATCGTCTTGCCGGTG 629959 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 || || || || || || ||||| Sbjct 629958 AGTGTCTTGACGAAAATCTGCAT 629936 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429494332793009