Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20hubeiensis_20[genbank_20GCA_5F001736105.1_202016-09-20] 9,793 sequences; 21,322,328 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq2 107 1e-18 seq11 98.7 7e-16 >seq2 Length=781092 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || || ||||| ||||| || ||||| | ||||| || || || Sbjct 629708 ATGCAGATTTTCGTCAAGACGCTCACAGGAAAGACCATCACCTTGGAAGTCGAGTCTTCG 629767 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | || ||||| ||||| |||||| | || || || || Sbjct 629768 GACACGATTGACAACGTCAAGGCCAAAATCCAGGACAAGGAAGGTATCCCTCCCGACCAG 629827 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| | || ||||| || || || || || || | ||||| | ||||||||||| Sbjct 629828 CAGCGACTCATCTTTGCTGGTAAGCAGCTCGAGGATGGTCGCACCCTGAGCGATTACAAC 629887 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || ||||| ||| ||| | || | || || | ||||| ||||| Sbjct 629888 ATTCAAAAGGAGAGCACCCTTCACCTTGTGTTGCGATTGCGCGGAGG 629934 >seq11 Length=377427 Score = 98.7 bits (108), Expect = 7e-16 Identities = 144/202 (71%), Gaps = 4/202 (2%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||| || || || ||||||||||| ||||| ||||| ||||| || || ||| Sbjct 224703 AAGATGCAGATCTTTGTCAAGACCCTCACGGGCAAAACCATCACCCTCGAGGTGGAGTCC 224644 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 ||||||| | || | | || || || ||||| ||||| | || || ||| Sbjct 224643 TCGGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGAT 224584 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCA--CTTTAGGCGATT 23785 || ||||| | || || ||||| || || || || |||| |||| |||| | || | Sbjct 224583 CAGCAGCGCCTCATCTTCGCCGGTAAGCAGCTCGAGGACGGCCGCACCCTTTCG--GACT 224526 Query 23786 ACAACATACAAAAAGAGTCCAC 23807 ||||||| || || ||||| || Sbjct 224525 ACAACATCCAGAAGGAGTCGAC 224504 Score = 89.7 bits (98), Expect = 3e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || ||| | || || || || ||||| ||||||||||| ||| | Sbjct 144713 ATGCAGATCTTCGTCAAGACCTTGACAGGCAAGACCATCACCCTCGAAGTTGAATCCTCC 144772 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || || || |||||||| || | || || || || Sbjct 144773 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAAGAGGGCATCCCCCCTGACCAG 144832 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || || | || || || || || ||||| || |||| ||||| || || |||||| Sbjct 144833 CAACGACTCATTTTCGCAGGAAAGCAACTCGAGGACGGTCGCACCTTGTCGGACTACAAC 144892 Query 23791 ATACAAAAAGAGTCCAC 23807 || || ||||||||||| Sbjct 144893 ATTCAGAAAGAGTCCAC 144909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337969257814844