Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20hubeiensis_20[genbank_20GCA_5F001736105.1_202016-09-20] 9,793 sequences; 21,322,328 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq2 152 1e-31 seq11 134 3e-26 seq1 125 2e-23 seq269 114 3e-20 >seq2 Length=781092 Score = 152 bits (168), Expect = 1e-31 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| |||||| || || |||| ||||| |||| || || | ||||| Sbjct 630147 AGGACGAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGTGTACGACCATCC 630088 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||| ||||| ||||| || |||||||| || ||||| |||||||| Sbjct 630087 TCGAGCTGCTTACCAGCAAAGATGAGTCGCTGCTGGTCGGGTGGGATACCCTCCTTGTCC 630028 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| ||||| |||||||| | || || || |||||||||||| Sbjct 630027 TGGATCTTGGCCTTGACATTGTCGATCGTGTCTGAAGACTCGACTTCCAACGTGATCGTC 629968 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || | || || | ||| | ||||| Sbjct 629967 TTGCCGGTGAGTGTCTTGACGAAAATCTGCAT 629936 Score = 131 bits (144), Expect = 4e-25 Identities = 153/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | || |||||||||||| |||||||| ||||| | ||||| |||| | || Sbjct 629701 ACGGAGACGCAAGACAAGGTGGAGTGTGGATTCCTTTTGAATGTTGTAGTCGGAAAGGGT 629642 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || ||||| |||||||| || |||||||| || || || || || || ||||| || Sbjct 629641 GCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATTAGGCGCTGCTGATCAGGGGGAATGCC 629582 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||| |||||||| || || || |||||||| || | || || || | Sbjct 629581 TTCCTTGTCCTGGATCTTGGCTTTGACGTTGTCAATGGTGTCCGACGACTCAACCTCGAG 629522 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTT 225698 || || |||||||| ||||| || || Sbjct 629521 GGTAATGGTCTTGCCGGTCAAGGTCTT 629495 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 225505 ACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCT 225564 |||||||| || ||| || ||||| | ||||||||| || || | ||||| || Sbjct 629916 ACAAGGTGAAGGGTGCTCTCCTTTTGAATGTTGTAATCGCTCAGGGTGCGACCATCCTCG 629857 Query 225565 AGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGG 225624 |||||||| ||||| ||||| ||||| || |||||||| || |||||||||||||| ||| Sbjct 629856 AGCTGCTTACCAGCAAAGATGAGTCGCTGCTGGTCGGGAGGGATACCTTCCTTGTCCTGG 629797 Query 225625 ATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTG 225684 || || ||| || || || ||||| || | || || || || ||||| ||||| Sbjct 629796 ATTTTGGCCTTGACGTTGTCAATCGTGTCCGAAGACTCGACTTCCAAGGTGATGGTCTTT 629737 Query 225685 CCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || | || || | ||| | ||||| Sbjct 629736 CCTGTGAGCGTCTTGACGAAAATCTGCAT 629708 >seq11 Length=377427 Score = 134 bits (148), Expect = 3e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || || ||||||||||| ||||| || | ||||| || | ||| || | || || Sbjct 144924 AGCACCAGATGGAGAGTGGACTCTTTCTGAATGTTGTAGTCCGACAAGGTGCGACCGTCC 144865 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || ||||| || ||||| || |||||||| ||||| || || || || || ||||| Sbjct 144864 TCGAGTTGCTTTCCTGCGAAAATGAGTCGTTGCTGGTCAGGGGGGATGCCCTCTTTGTCC 144805 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || ||||||||||| |||| ||| || || | ||||| ||| Sbjct 144804 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGATTCAACTTCGAGGGTGATGGTC 144745 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||| || || | ||| | ||||| Sbjct 144744 TTGCCTGTCAAGGTCTTGACGAAGATCTGCAT 144713 Score = 114 bits (126), Expect = 3e-20 Identities = 138/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||| || || || || || |||| ||||| || | | || | || || Sbjct 224489 AGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCC 224548 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| || || || || || || ||||| ||||||||||| Sbjct 224549 TCGAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGATCAGGGGGAATGCCTTCCTTGTCC 224608 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || ||||||||||| |||| ||||| || | ||||| || Sbjct 224609 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAGGACTCCACCTCGAGGGTGATGGTT 224668 Query 225682 TTGCCCGT 225689 |||||||| Sbjct 224669 TTGCCCGT 224676 Score = 107 bits (118), Expect = 5e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || || || ||||| || || || |||| ||||| || | ||| || | || ||| Sbjct 144696 AGTACGAGATGAAGAGTCGACTCCTTCTGGATGTTGTAGTCCGACAAGGTGCGGCCGTCT 144637 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || || ||||| || || || || || || ||||| ||||||||||| Sbjct 144636 TCAAGCTGCTTTCCGGCAAAGATGAGACGCTGCTGATCAGGGGGAATGCCTTCCTTGTCC 144577 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| || || || ||||| |||| || || || | ||||| ||| Sbjct 144576 TGAATCTTGGCCTTGACGTTGTCAATAGTGTCGGAGGACTCGACCTCGAGGGTGATGGTC 144517 Query 225682 TTGCCCGTCAAAGTTTT 225698 ||||| || | ||| || Sbjct 144516 TTGCCGGTGAGAGTCTT 144500 >seq1 Length=1046041 Score = 125 bits (138), Expect = 2e-23 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| | |||||||||||||| || || || || |||| ||||| || | | || Sbjct 845827 CGAAGACGGAGGACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTG 845768 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | || || || |||||||| || |||||||| || || || |||||||| || ||||| Sbjct 845767 CGGCCGTCCTCGAGCTGCTTACCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATACCC 845708 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 |||||||| || ||||| ||| ||| ||||||||||| || | ||||| || | Sbjct 845707 TCCTTGTCCTGAATCTTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGG 845648 Query 225673 GTGATCGTCTTGCCCGT 225689 ||||| ||||| || || Sbjct 845647 GTGATGGTCTTACCTGT 845631 >seq269 Length=665 Score = 114 bits (126), Expect = 3e-20 Identities = 134/181 (74%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 7551 CCAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTAT 7610 |||||| || |||||||| ||||| || ||||| || || ||||||||||| | ||||| Sbjct 434 CCAACTATATAACGTTATCATTACAGCACATGCTTTCGTAATGATTTTCTTCATGGTTAT 493 Query 7611 GCCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGA 7670 ||| | |||| |||| || || || || | | || || | ||||| || ||||| || Sbjct 494 GCCAGCTATGGTAGGTGGATTTGGTAACTACCTTGTGCCAGTTATGATCGGAGCTCCAGA 553 Query 7671 TATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATTTCT 7730 |||||| || || | || |||||||| || || ||||||| ||||| || |||| Sbjct 554 TATGGCGTTCCCTCGACTAAACAATATTTCATTCTGGCTACTACCTCCTTCACTAATTCT 613 Query 7731 A 7731 | Sbjct 614 A 614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192381569756342