Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20hubeiensis_20[genbank_20GCA_5F001736105.1_202016-09-20] 9,793 sequences; 21,322,328 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq62 105 9e-18 >seq62 Length=98030 Score = 105 bits (116), Expect = 9e-18 Identities = 336/519 (65%), Gaps = 14/519 (3%) Strand=Plus/Plus Query 48183 TCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCG 48242 ||||| || || |||||||||||||| || ||||| || |||||||| || || | ||| Sbjct 37186 TCGTTGGAGAAGGTGAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCG 37245 Query 48243 AAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAA 48302 || || ||||| ||||| ||||| || ||||| ||||| ||| | || | |||| | | Sbjct 37246 AAGGAACCAGAGAAGAAGATGCCCTCGACGGCAGCAAAGGCGATGAGACGCTCTGCAAAG 37305 Query 48303 CTGGC---TTCGTTGTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGC 48359 |||| | || | ||||| || | ||||| || ||||||| ||| || || Sbjct 37306 GTGGCGCGCTTGTCGCTGATCCATCGAAGAGCCCAGTCGGCCTTCTGCTTGACGACGGGG 37365 Query 48360 ATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTGCTATCTTT----AACGTAAGT 48415 || || || | || | |||||| || || | |||| | || | ||| || Sbjct 37366 ATGGTCTCGACGGCGTCAAAGAGGAA----TTCGCGCTGCTCTGGTTCGCGGATGTAGGT 37421 Query 48416 ATCTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTA 48475 || || | || || |||| ||||| || || || || ||||| || ||||| Sbjct 37422 GTCGATGAGGAGCGAGTAGGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTA 37481 Query 48476 AAAACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATT 48535 || || | || || | | ||| || |||| | ||||| || | | ||||| || Sbjct 37482 GAAGCAACGGGCCTCGGCGGCCTGAACTTCCGAGCTGAATCGCTCGACGAGGTTCTCGTT 37541 Query 48536 TACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTT 48595 || || || || ||| || || || || | || || || || | ||||| Sbjct 37542 GACGATGCCGTCGGAAGCGGCGAAGAAGGCGAGAACGTGGGAGATGAAGTGGCGCTCGTT 37601 Query 48596 GGAAGTCAGTTTATT---CCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGT 48652 | | || || || |||||| | || || || || | || | || || || || Sbjct 37602 GTCGTTGAGCTTGTTGTCCCAGTCGTGGAGGTCCTTGGAAAGGTCGATCTCCTCTGCGGT 37661 Query 48653 CCAAAATGATGCCTCTGCTTTTTTATACATATTCCATAT 48691 ||| || || ||||| || || || ||||| | ||| || Sbjct 37662 CCAGAAGGAAGCCTCGGCCTTCTTGTACATTTGCCAGAT 37700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694583763855520