Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20hubeiensis_20[genbank_20GCA_5F001736105.1_202016-09-20] 9,793 sequences; 21,322,328 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq11 118 2e-21 seq2 114 3e-20 seq1 93.3 1e-13 >seq11 Length=377427 Score = 118 bits (130), Expect = 2e-21 Identities = 160/221 (72%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || ||||||||||| ||||| || ||||||||||| || | || || | Sbjct 144703 GAGACGGAGTACGAGATGAAGAGTCGACTCCTTCTGGATGTTGTAGTCCGACAAGGTGCG 144644 Query 151946 CCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 || ||||| || ||||| ||||| ||||| || | |||||| || | | || ||| Sbjct 144643 GCCGTCTTCAAGCTGCTTT--CCGGCAAAGATGAGACGCTGCTGATCAGGGGGAATGCCT 144586 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 ||||| || ||||| || ||||| | || | |||| || ||| || || || Sbjct 144585 TCCTTGTCCTGAATCTTGGCCTTGACGTTGTCAATAGTGTCGGAGGACTCGACCTCGAGG 144526 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || ||||| ||||||||||| || |||| |||||| Sbjct 144525 GTGATGGTCTTGCCGGTGAGAGTCTTGACAAAGATCTGCAT 144485 Score = 104 bits (114), Expect = 5e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || || ||||| || ||||| || ||||||||||| || | | || | || || Sbjct 224489 AGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCC 224548 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||||||||| || | |||||| || | | || |||||||| || Sbjct 224549 TCGAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGATCAGGGGGAATGCCTTCCTTGTCC 224608 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || ||||| | || | | |||| || ||| || || || || || ||| Sbjct 224609 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAGGACTCCACCTCGAGGGTGATGGTT 224668 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 ||||||||||| ||||| || |||| |||||| || Sbjct 224669 TTGCCCGTGAGGGTCTTGACAAAGATCTGCATCTT 224703 >seq2 Length=781092 Score = 114 bits (126), Expect = 3e-20 Identities = 159/221 (72%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| | || || || ||||| || ||||||||||| || | | |||| Sbjct 629470 GAGACGGAGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTTCG 629411 Query 151946 CCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 || || || || ||||| |||||||| || || | ||||||||| | | ||| || Sbjct 629410 TCCGTCCTCGAGCTGCTTT--CCGGCGAAAATGAGACGCTGCTGGTCAGGAGGGATGCCC 629353 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 ||||| || || || || ||||| | || | | |||| ||| ||| || || || Sbjct 629352 TCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCGAGG 629293 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| ||||| || |||||||| ||||||| |||||| Sbjct 629292 GTGATAGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 629252 Score = 105 bits (116), Expect = 2e-17 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| || || ||||| ||| || ||||||||||| |||| | || | ||||| Sbjct 630148 GAGGACGAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGTGTACGACCATC 630089 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || || || ||||| || | ||||||||| | | ||| || ||||| || Sbjct 630088 CTCGAGCTGCTTACCAGCAAAGATGAGTCGCTGCTGGTCGGGTGGGATACCCTCCTTGTC 630029 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || || || |||||| | || | |||||||| ||| ||||| | || || || Sbjct 630028 CTGGATCTTGGCCTTGACATTGTCGATCGTGTCTGAAGACTCGACTTCCAACGTGATCGT 629969 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| ||||| ||||| ||||| | |||||| Sbjct 629968 CTTGCCGGTGAGTGTCTTGACGAAAATCTGCAT 629936 Score = 100 bits (110), Expect = 7e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 151895 GACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTC 151954 |||||| || || || || || ||||| |||||||| |||| | || | || ||||| Sbjct 629689 GACAAGGTGGAGTGTGGATTCCTTTTGAATGTTGTAGTCGGAAAGGGTGCGGCCGTCTTC 629630 Query 151955 TAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 || || ||||||||||| || | |||||| || | | || |||||||| || || Sbjct 629629 GAGCTGCTTGCCGGCGAAGATTAGGCGCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTG 629570 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 || || |||||| | || | | |||| || ||| || || || ||||| || || Sbjct 629569 GATCTTGGCTTTGACGTTGTCAATGGTGTCCGACGACTCAACCTCGAGGGTAATGGTCTT 629510 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||| || | ||||| || |||| |||||| Sbjct 629509 GCCGGTCAAGGTCTTGACAAAGATCTGCAT 629480 Score = 98.7 bits (108), Expect = 2e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955 ||||| ||||| || ||| ||||| |||||||||||| | || | ||||| || Sbjct 629916 ACAAGGTGAAGGGTGCTCTCCTTTTGAATGTTGTAATCGCTCAGGGTGCGACCATCCTCG 629857 Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015 || || || || ||||| || | ||||||||| | | ||| |||||||| || || Sbjct 629856 AGCTGCTTACCAGCAAAGATGAGTCGCTGCTGGTCGGGAGGGATACCTTCCTTGTCCTGG 629797 Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075 ||||| ||||| | || | |||| ||| ||| ||||| | || || || || Sbjct 629796 ATTTTGGCCTTGACGTTGTCAATCGTGTCCGAAGACTCGACTTCCAAGGTGATGGTCTTT 629737 Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| ||||| ||||| | |||||| Sbjct 629736 CCTGTGAGCGTCTTGACGAAAATCTGCAT 629708 >seq1 Length=1046041 Score = 93.3 bits (102), Expect = 1e-13 Identities = 134/189 (71%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||||||||| || || || ||||| || ||||||||||| || | | || | || || Sbjct 845819 GAGGACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTC 845760 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || ||||||||||| || | ||||||||| | | ||| || ||||| || Sbjct 845759 CTCGAGCTGCTTACCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATACCCTCCTTGTC 845700 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 ||||| || |||||| | || | | |||| ||| ||| || ||||| || || || Sbjct 845699 CTGAATCTTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATGGT 845640 Query 152072 TTTGCCCGT 152080 || || || Sbjct 845639 CTTACCTGT 845631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153676026859103