Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20hubeiensis_20[genbank_20GCA_5F001736105.1_202016-09-20] 9,793 sequences; 21,322,328 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq11 172 1e-37 seq2 168 1e-36 seq1 134 3e-26 seq31 87.8 4e-12 seq166 86.0 1e-11 seq5 86.0 1e-11 >seq11 Length=377427 Score = 172 bits (190), Expect = 1e-37 Identities = 177/229 (77%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG- 282930 ||| ||||| || || || |||||||| | ||| ||||| || ||||||||||| | Sbjct 144940 ACCTCCACGGAGACGGAGCACCAGATGGAGAGTGGACTCTTTCTGAATGTTGTAGTCCGA 144881 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 |||| ||||| || ||||| ||||| || || || || || | ||||| |||||| | Sbjct 144880 CAAG-GTGCGACCGTCCTCGAGTTGCTTTCCTGCGAAAATGAGTCGTTGCTGGTCAGGGG 144822 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 | || ||||| ||||| |||||||| || || ||| | ||||| ||||| || | ||| | Sbjct 144821 GGATGCCCTCTTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGATTCAA 144762 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||||| ||||| ||||| || ||||| ||||| ||||| |||||||| Sbjct 144761 CTTCGAGGGTGATGGTCTTGCCTGTCAAGGTCTTGACGAAGATCTGCAT 144713 Score = 168 bits (186), Expect = 1e-36 Identities = 176/231 (76%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||||||||| || || || | || || || |||||||||||||| | Sbjct 224473 ACCACCACGCAGGCGAAGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 224532 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| |||||||| ||||| || || || ||||| ||||| | || || || ||| || Sbjct 224533 AAGGGTGCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGATCAGGGGG 224592 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || |||||||| |||||||| || || ||| | ||||| |||||||| | || || Sbjct 224593 AATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAGGACTCCAC 224652 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 ||||| ||||| || || ||||| | ||||| || || |||||||| || Sbjct 224653 CTCGAGGGTGATGGTTTTGCCCGTGAGGGTCTTGACAAAGATCTGCATCTT 224703 Score = 158 bits (174), Expect = 3e-33 Identities = 174/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG- 282930 |||||| || || || ||||| ||||| | || || || |||||||||||||| | Sbjct 144712 ACCACCTCGGAGACGGAGTACGAGATGAAGAGTCGACTCCTTCTGGATGTTGTAGTCCGA 144653 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 |||| |||||||| || || || || || ||||||||||| | ||| || || ||| | Sbjct 144652 CAAG-GTGCGGCCGTCTTCAAGCTGCTTTCCGGCAAAGATGAGACGCTGCTGATCAGGGG 144594 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 |||| || |||||||| || ||||| || || ||| | || |||||||| || | |||| Sbjct 144593 GAATGCCTTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCAATAGTGTCGGAGGACTCGA 144534 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | ||||| ||||| ||||| || || | |||||| || || |||||||| Sbjct 144533 CCTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACAAAGATCTGCAT 144485 >seq2 Length=781092 Score = 168 bits (186), Expect = 1e-36 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| |||||||| || || || || || | ||||| || || |||||||||||||| | Sbjct 630163 ACCGCCACGCAGACGGAGGACGAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGA 630104 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || || |||||||| || || || || |||||||| | || || ||||| || Sbjct 630103 CAGTGTACGACCATCCTCGAGCTGCTTACCAGCAAAGATGAGTCGCTGCTGGTCGGGTGG 630044 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||||| |||||||| || || || | ||||| ||||| |||| ||||| Sbjct 630043 GATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATCGTGTCTGAAGACTCGAC 629984 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| | ||||||||||| || || | ||||| ||||| |||||||| Sbjct 629983 TTCCAACGTGATCGTCTTGCCGGTGAGTGTCTTGACGAAAATCTGCAT 629936 Score = 159 bits (176), Expect = 7e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || |||| || | || || || |||||||||||||| | Sbjct 629479 ACCACCACGGAGACGGAGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 629420 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||| || || ||||| || || || ||||| || || | ||| || |||||| || Sbjct 629419 GAGCGTTCGTCCGTCCTCGAGCTGCTTTCCGGCGAAAATGAGACGCTGCTGGTCAGGAGG 629360 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||||| || || ||| | || || ||||| |||| || || Sbjct 629359 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTGTCGGAAGACTCCAC 629300 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| ||||| || |||| |||||| ||||| |||||||| Sbjct 629299 CTCGAGGGTGATAGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 629252 Score = 159 bits (176), Expect = 7e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || | || || || | ||| ||| ||||| ||||||||||| | Sbjct 629707 ACCACCACGGAGACGCAAGACAAGGTGGAGTGTGGATTCCTTTTGAATGTTGTAGTCGGA 629648 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| |||||||| || || || || || ||||| ||||| | || || || ||| || Sbjct 629647 AAGGGTGCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATTAGGCGCTGCTGATCAGGGGG 629588 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || |||||||| |||||||| ||||| ||| | || || |||||||| | || || Sbjct 629587 AATGCCTTCCTTGTCCTGGATCTTGGCTTTGACGTTGTCAATGGTGTCCGACGACTCAAC 629528 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| || || ||||| || ||||| ||||| || || |||||||| Sbjct 629527 CTCGAGGGTAATGGTCTTGCCGGTCAAGGTCTTGACAAAGATCTGCAT 629480 >seq1 Length=1046041 Score = 134 bits (148), Expect = 3e-26 Identities = 152/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || || || || || || || | || || || |||||||||||||| | Sbjct 845834 ACCACCGCGAAGACGGAGGACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 845775 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| |||||||| ||||| || || || ||||| ||||||| || || ||||| || Sbjct 845774 AAGGGTGCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATCAGGCGCTGCTGGTCGGGGGG 845715 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||||| || ||||| || || || | ||||| ||||| |||| || || Sbjct 845714 GATACCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCGATGGTGTCGGAAGACTCCAC 845655 Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075 || || ||||| |||||||| || Sbjct 845654 CTCAAGGGTGATGGTCTTACCTGT 845631 >seq31 Length=208894 Score = 87.8 bits (96), Expect = 4e-12 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 167116 AGACGCCATAGCTCAGTTGGTTAGAGCGTTCGACTGTTAATCGAGAGGTCGTCGGTTCGA 167175 |||| |||||||||||||||||||||||| ||||||||| ||||||| |||||||| Sbjct 88532 AGACTCCATAGCTCAGTTGGTTAGAGCGTAGCACTGTTAATGCTGAGGTCGGCGGTTCGA 88473 Query 167176 ACCCGACTGGTGTCGTAT 167193 |||| |||| |||| || Sbjct 88472 GCCCGCCTGGGGTCGCAT 88455 Score = 86.0 bits (94), Expect = 1e-11 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 167287 AGACGCCATAGCTCAGTTGGTTAGAGCGTTCGACTGTTAATCGAGAGGTCGTCGGTTCGA 167346 |||| |||||||||||||||||||||||| ||||||||| ||||||| |||||||| Sbjct 88532 AGACTCCATAGCTCAGTTGGTTAGAGCGTAGCACTGTTAATGCTGAGGTCGGCGGTTCGA 88473 Query 167347 ACCCGACTGGTGTCG 167361 |||| |||| |||| Sbjct 88472 GCCCGCCTGGGGTCG 88458 >seq166 Length=1289 Score = 86.0 bits (94), Expect = 1e-11 Identities = 113/153 (74%), Gaps = 4/153 (3%) Strand=Plus/Minus Query 109934 AGATTGCAACATCATCAAATTGCGGGAACCCCCTAAAGCATATGATACCAAGGTTGATTG 109993 || |||| ||| ||||||||||||| || |||||||| | |||||||| | || Sbjct 409 AGCTTGCGACACTATCAAATTGCGGGGACGTCCTAAAGCTTTCAATACCAAGCCGGCGTG 350 Query 109994 TGAAAGCATCAGCTGGCCGAG--AACAGAACTCGGGTATGGTAAAAATTCATATGATGCC 110051 || || | |||||||| || || || |||||||||||||||| | |||| Sbjct 349 GAAACACAGTCGGTGGCCGAGTTAATAGCCCT-GGGTATGGTAAAAATTTGAAAGATGTT 291 Query 110052 ACAATGGGCAATCCGCAGCCAAGCCTCTAAAGG 110084 ||||||| |||||||||||||| | ||||||| Sbjct 290 ACAATGGATAATCCGCAGCCAAGTC-CTAAAGG 259 >seq5 Length=533949 Score = 86.0 bits (94), Expect = 1e-11 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 167117 GACGCCATAGCTCAGTTGGTTAGAGCGTTCGACTGTTAATCGAGAGGTCGTCGGTTCGAA 167176 ||| |||||||||||||||||||||||| ||||||||| ||||||| |||||||| Sbjct 69806 GACTCCATAGCTCAGTTGGTTAGAGCGTAGCACTGTTAATGCTGAGGTCGGCGGTTCGAG 69865 Query 167177 CCCGACTGGTGTCGTAT 167193 |||| |||| |||| || Sbjct 69866 CCCGCCTGGGGTCGCAT 69882 Score = 84.2 bits (92), Expect = 5e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 167288 GACGCCATAGCTCAGTTGGTTAGAGCGTTCGACTGTTAATCGAGAGGTCGTCGGTTCGAA 167347 ||| |||||||||||||||||||||||| ||||||||| ||||||| |||||||| Sbjct 69806 GACTCCATAGCTCAGTTGGTTAGAGCGTAGCACTGTTAATGCTGAGGTCGGCGGTTCGAG 69865 Query 167348 CCCGACTGGTGTCG 167361 |||| |||| |||| Sbjct 69866 CCCGCCTGGGGTCG 69879 Score = 84.2 bits (92), Expect = 5e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 167117 GACGCCATAGCTCAGTTGGTTAGAGCGTTCGACTGTTAATCGAGAGGTCGTCGGTTCGAA 167176 ||| |||||||||||||||||||||||| ||||||||| ||||||| |||||||| Sbjct 103921 GACTCCATAGCTCAGTTGGTTAGAGCGTAGCACTGTTAATGCTGAGGTCGGCGGTTCGAG 103980 Query 167177 CCCGACTGGTGTCG 167190 |||| |||| |||| Sbjct 103981 CCCGCCTGGGGTCG 103994 Score = 84.2 bits (92), Expect = 5e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 167288 GACGCCATAGCTCAGTTGGTTAGAGCGTTCGACTGTTAATCGAGAGGTCGTCGGTTCGAA 167347 ||| |||||||||||||||||||||||| ||||||||| ||||||| |||||||| Sbjct 103921 GACTCCATAGCTCAGTTGGTTAGAGCGTAGCACTGTTAATGCTGAGGTCGGCGGTTCGAG 103980 Query 167348 CCCGACTGGTGTCG 167361 |||| |||| |||| Sbjct 103981 CCCGCCTGGGGTCG 103994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046607862688622