Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudozyma_20hubeiensis_20[genbank_20GCA_5F001736105.1_202016-09-20]
9,793 sequences; 21,322,328 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq11 150 4e-31
seq2 150 4e-31
seq1 140 8e-28
>seq11
Length=377427
Score = 150 bits (166), Expect = 4e-31
Identities = 159/207 (77%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || || | ||||| || || ||||||||||| || ||| ||| |||
Sbjct 144716 CAGATCTTCGTCAAGACCTTGACAGGCAAGACCATCACCCTCGAAGTTGAATCCTCCGAC 144775
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| ||||| ||||||||||| || ||||| || |||||||||
Sbjct 144776 ACCATCGACAACGTCAAGGCCAAGATCCAGGACAAAGAGGGCATCCCCCCTGACCAGCAA 144835
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102
||||| || ||||| ||||| || ||||| || || | || |||| | || || ||| |
Sbjct 144836 CGACTCATTTTCGCAGGAAAGCAACTCGAGGACGGTCGCAC-CTTGTCGGACTACAACAT 144894
Query 178103 CCAAAAAGAATCAACACTGCATCTTGT 178129
|| ||||| || || || ||||| ||
Sbjct 144895 TCAGAAAGAGTCCACTCTCCATCTGGT 144921
Score = 150 bits (166), Expect = 4e-31
Identities = 157/206 (76%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || || || ||||| || ||||| ||||||||||||||||| ||| |||
Sbjct 224697 CAGATCTTTGTCAAGACCCTCACGGGCAAAACCATCACCCTCGAGGTGGAGTCCTCGGAC 224638
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| ||||| |||||||| ||||| || || || || |||||
Sbjct 224637 ACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGATCAGCAG 224578
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||||||||| || |||||||| || || | || ||| | || || ||| ||
Sbjct 224577 CGCCTCATCTTCGCCGGTAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACATC 224518
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || || ||
Sbjct 224517 CAGAAGGAGTCGACCCTTCACCTCGT 224492
Score = 141 bits (156), Expect = 2e-28
Identities = 157/207 (76%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || || |||||||| || || || |||||||||||||| || ||| |||
Sbjct 144488 CAGATCTTTGTCAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCCGAC 144547
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || |||||||| |||||||||||||| ||||| || || || || |||||
Sbjct 144548 ACTATTGACAACGTCAAGGCCAAGATTCAGGACAAGGAAGGCATTCCCCCTGATCAGCAG 144607
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102
|| || ||||| |||||||| ||||| ||||| || | || |||| | || || ||| |
Sbjct 144608 CGTCTCATCTTTGCCGGAAAGCAGCTTGAAGACGGCCGCAC-CTTGTCGGACTACAACAT 144666
Query 178103 CCAAAAAGAATCAACACTGCATCTTGT 178129
||| || || || || || ||||| ||
Sbjct 144667 CCAGAAGGAGTCGACTCTTCATCTCGT 144693
>seq2
Length=781092
Score = 150 bits (166), Expect = 4e-31
Identities = 157/205 (77%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || ||||| || || || || ||||||||||||||||| || |||
Sbjct 629255 CAGATCTTCGTCAAGACTCTGACCGGCAAGACTATCACCCTCGAGGTGGAGTCTTCCGAC 629314
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || |||||||| ||||| |||||||| || || |||||||| ||||||||
Sbjct 629315 ACCATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCTGACCAGCAG 629374
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || || ||||||||||| |||||||| || ||| | || || | || || ||| ||
Sbjct 629375 CGTCTCATTTTCGCCGGAAAGCAGCTCGAGGACGGACGAACGCTCTCGGACTACAACATC 629434
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || || || || || || ||||
Sbjct 629435 CAGAAGGAGTCGACCCTCCA-CTTG 629458
Score = 150 bits (166), Expect = 4e-31
Identities = 163/216 (75%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || || || | || || || || || ||||||||||| || || |||
Sbjct 629483 CAGATCTTTGTCAAGACCTTGACCGGCAAGACCATTACCCTCGAGGTTGAGTCGTCGGAC 629542
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || ||||||||| ||||| |||||||| ||||| || || || || |||||
Sbjct 629543 ACCATTGACAACGTCAAAGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGATCAGCAG 629602
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||||||||| || ||||||||||| || | || ||| |||| || ||| |
Sbjct 629603 CGCCTAATCTTCGCCGGCAAGCAGCTCGAAGACGGCCGCACCCTTTCCGACTACAACATT 629662
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139
||||| ||||| ||||| || ||||| ||| | |||
Sbjct 629663 CAAAAGGAATCCACACTCCACCTTGTCTTGCGTCTC 629698
Score = 141 bits (156), Expect = 2e-28
Identities = 159/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| || || ||||||||||| || |||||| | || || || || |||
Sbjct 629711 CAGATTTTCGTCAAGACGCTCACAGGAAAGACCATCACCTTGGAAGTCGAGTCTTCGGAC 629770
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || |||||||| || || |||||||| ||||| |||||||| ||||||||
Sbjct 629771 ACGATTGACAACGTCAAGGCCAAAATCCAGGACAAGGAAGGTATCCCTCCCGACCAGCAG 629830
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||||| ||||| || || || |||||||| ||||| | || || |||||| ||| |
Sbjct 629831 CGACTCATCTTTGCTGGTAAGCAGCTCGAGGATGGTCGCACCCTGAGCGATTACAACATT 629890
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGA 178136
||||| || || || || ||||| ||| ||
Sbjct 629891 CAAAAGGAGAGCACCCTTCACCTTGTGTTGCGA 629923
>seq1
Length=1046041
Score = 140 bits (154), Expect = 8e-28
Identities = 142/185 (77%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAA 178004
||||| || || |||||||| |||||||| || ||||||||||| || |||||
Sbjct 845631 ACAGGTAAGACCATCACCCTTGAGGTGGAGTCTTCCGACACCATCGACAATGTCAAGGCC 845690
Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064
|||||||||||||| || || ||||| || |||||||| || || ||||||||||| ||
Sbjct 845691 AAGATTCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGCCTGATCTTCGCCGGTAAG 845750
Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124
|||||||| || || | || ||| | || || ||| |||| || || || || || ||
Sbjct 845751 CAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCGACCCTCCAC 845810
Query 178125 CTTGT 178129
|||||
Sbjct 845811 CTTGT 845815
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203580164460842
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |