Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09- 20] 12,840 sequences; 23,769,677 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq69 145 8e-30 >seq69 Length=107628 Score = 145 bits (160), Expect = 8e-30 Identities = 270/394 (69%), Gaps = 2/394 (1%) Strand=Plus/Minus Query 16999 GATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATAT 17058 ||| || ||||| || || || | |||||||| || || ||||| | ||| || || Sbjct 12585 GATGAGCTCGTTGGAGAAAGTGAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGAT 12526 Query 17059 CGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTC 17118 | |||||||| || || ||||| ||||| ||||||| || || |||| | ||||| Sbjct 12525 GGAAGCGAACGAACCGGAGAAGAAGATACCTTCGACGGCGGCGAAAGCGACGAGACGTTC 12466 Query 17119 GGCGTACGTCGCGTCTTTGTTACGA-ATCCATTTCTGCACCCACTCGGCTTTTTGCTTTA 17177 ||| | || ||| | | | ||| ||||| | |||| |||||||||||||| | Sbjct 12465 GGCAAAAGTGGCG-CGACGGTCCGAGATCCAACGAAGAGCCCAGTCGGCTTTTTGCTTGA 12407 Query 17178 TGCAATCCATCGTTTCTATGGCCTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATAT 17237 | || || || | ||| | || | ||| | || | ||| || | Sbjct 12406 CGACGGGGATGGTCTCGACGGCGTCGAAGAGGAACTCGCGCTGCTCGGGTTCGCGGATGT 12347 Query 17238 ACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATC 17297 | || |||||||| ||| ||| |||||||||| ||||||||||| ||||| || | Sbjct 12346 AGGTGTCGATGAGGAGGGAGTAGGTTTCGGAGTGGATGTTCTCCATCATGATCTGGAAAC 12287 Query 17298 CGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTT 17357 |||| ||||| || ||||| || ||| ||||| | ||||||| || | ||||| | Sbjct 12286 CGTAGAAGCAGCGAGCTTCGGCGGCTTGGACTTCAGAGGAGAATCGCTCGACGAGATTCT 12227 Query 17358 CGTTCACGATGCCGTCGCTCGCGGCGAAAAACGC 17391 |||| ||||| |||||| |||||||| || || Sbjct 12226 CGTTAACGATACCGTCGGAAGCGGCGAAGAAGGC 12193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517462533931200