Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09-
20] 12,840 sequences; 23,769,677 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq144 95.1 1e-14
seq62 95.1 1e-14
seq33 86.0 5e-12
>seq144
Length=29207
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | ||| |||| ||||| ||||||||||| || ||||| |||||||
Sbjct 8183 CCACCACGGAGACGGAGGACCAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCCGAG 8124
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|||||| || | || |||| |||||| || || | || || | ||||||||| ||
Sbjct 8123 AGGGTTCGGCCATCTTCCAACTGTTTACCAGCGAAGATGAGACGCTGCTGGTCGGGAGGG 8064
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| || |||||||| || || || || | | | | || || | ||||
Sbjct 8063 ATACCCTCCTTGTCCTGAATTTTGGCCTTGACGTTGTCAATGGTGTCGGAAGACTCCACC 8004
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | ||| |||||||| ||||| | || |||||||| || |||||
Sbjct 8003 TCGAGGGTGATGGTCTTACCGGTCAGAGTCTTGACAAAGATCTGCAT 7957
Score = 95.1 bits (104), Expect = 1e-14
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 20984 CTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATA 21043
||||||||||||||| ||||| | || ||| || ||||||| || || || || ||| |
Sbjct 8604 CTCCTTTTGAATGTTGTAGTCGGAGAGTGTTCGGCCGTCCTCAAGTTGCTTTCCAGCAAA 8545
Query 21044 AATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTG 21103
|| || | ||||| || || | |||||||||||| |||||| || || |
Sbjct 8544 GATGAGGCGTTGCTGATCAGGTGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTT 8485
Query 21104 GCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGAC 21163
| ||| |||||| | ||| || | |||||||||||||| || | ||||||||
Sbjct 8484 GTCGATGGTATCAGAAGACTCGACCTCGAGAGTAATGGTCTTGCCTGTAAGGGTTTTGAC 8425
Query 21164 AAATATTTGCAT 21175
|| || |||||
Sbjct 8424 GAAGATCTGCAT 8413
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | ||| || | ||| | || || || || || ||||| || || | |
Sbjct 8411 CCACCACGAAGACGGAGAACGAGATGGAGGGTCGATTCTTTCTGGATGTTGTAATCGGAC 8352
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
| ||| || ||||||| ||||| || || || |||| || | |||||| || ||
Sbjct 8351 AAGGTGCGGCCGTCCTCAAGCTGCTTTCCGGCGAAAATGAGACGCTGCTGATCGGGAGGA 8292
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| |||||||||||| ||||| || || | ||| ||| ||| | |||
Sbjct 8291 ATGCCTTCCTTGTCCTGAATCTTGGCCTTGACGTTATCGATAGTGTCAGACGACTCAACC 8232
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | ||||||||||||||||| || || ||||| || || |||||
Sbjct 8231 TCGAGAGTAATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 8185
>seq62
Length=118391
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | ||| || | || | |||||||||||| || ||||| |||||||
Sbjct 71412 CCACCGCGGAGACGGAGGACGAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAG 71471
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| || | ||||| ||||| || || ||| | ||||| | ||||||||| ||
Sbjct 71472 AGGGTGCGGCCATCCTCGAGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCAGGTGGG 71531
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| || ||||| || ||||| || || | | | | || || || |||
Sbjct 71532 ATACCCTCCTTATCCTGAATCTTGGCCTTGACGTTGTCAATGGTGTCCGAGGACTCAACC 71591
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | ||| |||||||||||||| | || |||||||| || |||||
Sbjct 71592 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 71638
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | ||| |||| ||| | ||||| ||||| || ||||| || || |
Sbjct 71184 CCACCACGGAGACGGAGGACCAAATGAAGTGTGGATTCCTTCTGGATGTTGTAATCTGAA 71243
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| || || |||| || ||||| ||||| || | || || | |||||| || ||
Sbjct 71244 AGAGTGCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATCGGGAGGG 71303
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| |||||||||||| |||||| || || | | ||| || || | ||| |
Sbjct 71304 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAAGACTCGACT 71363
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | || ||||||||||| || || || |||||||| || |||||
Sbjct 71364 TCAAGAGTGATGGTCTTGCCAGTCAAAGTCTTGACAAAGATCTGCAT 71410
>seq33
Length=194022
Score = 86.0 bits (94), Expect = 5e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | |||||| | || | || |||||||| || ||||| |||||||
Sbjct 184341 CCACCACGGAGGCGGAGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 184282
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| | | || || ||||| || || || | || || | |||||| || |||
Sbjct 184281 AGGGTGCGTCCATCTTCGAGCTGCTTACCGGCGAAGATGAGACGCTGCTGATCAGGGGGA 184222
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| |||||||||||| |||||| || || | | ||| || || | ||||
Sbjct 184221 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACC 184162
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178
|| | ||| ||||||||||| || | || || ||||| || ||||| ||
Sbjct 184161 TCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTAACAAAGATCTGCATCTT 184112
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422193121713440
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