Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09- 20] 12,840 sequences; 23,769,677 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq69 342 5e-89 seq144 140 3e-28 seq62 132 5e-26 seq33 125 7e-24 seq24 113 5e-20 seq11049 95.1 1e-14 >seq69 Length=107628 Score = 342 bits (378), Expect = 5e-89 Identities = 425/579 (73%), Gaps = 15/579 (3%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| |||||||| || || |||||||||| ||| ||| | ||||| Sbjct 12064 ATCTGGCAAATGTACAAGAAGGCCGAAGCCTCCTTCTGGACCGCCGAAGAGATCGACCTT 12123 Query 116696 TCCAAGGA----CACGA--GCGACTGGGAGCGCTTGAACGACAACGAGCGCCATTTCATC 116749 |||||||| ||||| | ||| ||| | |||||||||||||| || |||||| Sbjct 12124 TCCAAGGATCTTCACGATTGGGACAACAAGCTC---AACGACAACGAGCGTCACTTCATC 12180 Query 116750 AAGCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAG 116809 ||||| || ||||| |||||||| |||||| ||||| ||||||||||| |||||| Sbjct 12181 TCTCACGTCCTTGCCTTCTTCGCCGCTTCCGACGGTATCGTTAACGAGAATCTCGTCGAG 12240 Query 116810 CGTTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCC 116869 || ||| | || || || | ||||| || || ||||||||||| || |||||| Sbjct 12241 CGATTCTCCTCTGAAGTCCAAGCCGCCGAAGCTCGCTGCTTCTACGGTTTCCAGATCATG 12300 Query 116870 ATGGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCG 116929 ||||||||| | ||||| |||| || || |||||||||||| ||| | ||| | Sbjct 12301 ATGGAGAACATCCACTCCGAAACCTACTCCCTCCTCATCGACACCTACATCCGCGAACCC 12360 Query 116930 GAGGAGA---AGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAG 116986 ||| || || ||| | || ||||| ||||||| || || |||||| | || Sbjct 12361 GAGCAGCGCGAGTTCC---TCTTCGACGCCGTCGAGACCATCCCCGTCGTCAAGCAAAAA 12417 Query 116987 GCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTG 117046 ||||| ||||| || || |||||| | | | | ||| | || | ||| || || || Sbjct 12418 GCCGACTGGGCTCTTCGTTGGATCTCGGACCGTCGCGCCACTTTTGCCGAACGTCTCGTC 12477 Query 117047 GCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTC 117106 || ||||| |||||||| || ||||||| || || ||||| |||| || |||||| Sbjct 12478 GCTTTCGCCGCCGTCGAAGGTATCTTCTTCTCCGGTTCGTTCGCTTCCATCTTCTGGCTC 12537 Query 117107 AAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAG 117166 ||||| || || ||||||||||| || |||||| ||||||||||||||| | || ||| Sbjct 12538 AAGAAGCGTGGTCTCATGCCCGGTCTCACTTTCTCCAACGAGCTCATCTCGCGTGATGAG 12597 Query 117167 GGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCAT 117205 || |||| |||||||||||| ||||| ||| |||| Sbjct 12598 GGCATGCACACCGACTTTGCCTGCTTGCTCTTCTCGCAT 12636 >seq144 Length=29207 Score = 140 bits (154), Expect = 3e-28 Identities = 155/204 (76%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || || || ||||||||| |||| || || | || Sbjct 7957 ATGCAGATCTTTGTCAAGACTCTGACCGGTAAGACCATCACCCTCGAGGTGGAGTCTTCC 8016 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| ||||||| ||||| ||||| ||||| | ||||| Sbjct 8017 GACACCATTGACAACG-TCAAGGCCAAAATTCAGGACAAGGAGGGTATCCCTCCCGACCA 8075 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| || |||||| |||| || | || |||||| |||||||| Sbjct 8076 GCAGCGTCTCATCTTCGCTGGTAAACAGTTGGAAGATGGCCGAACCCTCTCGGACTACAA 8135 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| |||| |||| Sbjct 8136 CATCCAGAAGGAGTCCACCTTGCA 8159 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || ||||| || || |||||||| | || ||||| || | Sbjct 8641 ATGCAAATCTTTGTCAAGACACTCACAGGAAAGACCATCACATTGGAAGTCGAGTCCTCG 8700 Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | || || | |||||| || |||| ||||| |||||||||||| | ||||| Sbjct 8701 GACACGATTGACAATG-TCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCCCCTGACCA 8759 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| || || || ||| |||| || | |||||||| |||||||| Sbjct 8760 GCAGCGTCTTATCTTTGCAGGTAAGCAGTTGGAAGATGGTCGCACCCTTTCGGACTACAA 8819 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||||| ||| || || || ||| | || ||| | || || Sbjct 8820 CATCCAGAAGGAGAGCACTCTTCACCTTGTGCTTCGTTTGCGCGGAGG 8867 Score = 129 bits (142), Expect = 6e-25 Identities = 161/217 (74%), Gaps = 3/217 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || |||||||| || || || |||||| |||| || || | | Sbjct 8869 ATGCAGATCTTTGTCAAGACGCTCACTGGAAAGACGATCACCCTCGAGGTTGAGTCGTCG 8928 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGC-GGACC 40807 |||| | | | |||| |||||| || |||| ||||| |||| || ||| | ||||| Sbjct 8929 GACACCATTGACAACG-TCAAGGCCAAGATTCAAGACAAGGAGGATATTCCCCCTGGACC 8987 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 |||| || || |||| || || || ||| |||| |||| ||||||||| ||||||| Sbjct 8988 AGCAGCGTCTTATCTTTGCAGGTAAGCAGTTGGAAGACGGTCGCACCCTCTCGGACTACA 9047 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||||||||||||| ||| |||| || || ||||| Sbjct 9048 ACATCCAGAAGGAGAGCACTTTGCACCTTGTCTTGCG 9084 Score = 105 bits (116), Expect = 7e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| || || ||||| ||||| || |||| ||||| | | Sbjct 8413 ATGCAGATCTTCGTCAAAACCCTTACAGGCAAGACCATTACTCTCGAGGTCGAGTCTTCT 8472 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| | |||| || || | ||||| || ||||| || | || || Sbjct 8473 GATACCATCGACAACG-TAAAGGCCAAGATCCAGGACAAGGAAGGCATTCCACCTGATCA 8531 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| ||||||| || || || || || || |||| || || ||| ||||||||| Sbjct 8532 GCAACGCCTCATCTTTGCTGGAAAGCAACTTGAGGACGGCCGAACACTCTCCGACTACAA 8591 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||| || |||||| |||||| || || || Sbjct 8592 CATTCAAAAGGAGAGCACGCTTCACCTCGT 8621 Score = 96.9 bits (106), Expect = 4e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || ||||| ||||| || |||| || || | | Sbjct 8185 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATTACTCTCGAGGTTGAGTCGTCT 8244 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| |||||| || |||| ||||| || ||||| || | || || Sbjct 8245 GACACTATCGATAACG-TCAAGGCCAAGATTCAGGACAAGGAAGGCATTCCTCCCGATCA 8303 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||| | ||| || || ||||| || |||| |||||| | ||| ||||| Sbjct 8304 GCAGCGTCTCATTTTCGCCGGAAAGCAGCTTGAGGACGGCCGCACCTTGTCCGATTACAA 8363 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||| || | || || ||||| || Sbjct 8364 CATCCAGAAAGAATCGACCCTCCATCTCGT 8393 >seq62 Length=118391 Score = 132 bits (146), Expect = 5e-26 Identities = 157/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || ||||| ||||| ||||||||| |||| || || || | Sbjct 71638 ATGCAGATCTTTGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTTGAGTCCTCG 71579 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| || |||| || || ||||| ||||| | ||||| Sbjct 71578 GACACCATTGACAACG-TCAAGGCCAAGATTCAGGATAAGGAGGGTATCCCACCTGACCA 71520 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| || || || ||||| || || | ||||||||| |||||||| Sbjct 71519 GCAGCGTCTTATCTTTGCTGGTAAGCAGCTCGAGGATGGCCGCACCCTCTCGGACTACAA 71460 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| |||| || || || || Sbjct 71459 CATCCAGAAGGAGTCCACTCTTCACCTCGT 71430 Score = 111 bits (122), Expect = 2e-19 Identities = 149/205 (73%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || | || ||||| |||||||| | || ||||| | | Sbjct 71410 ATGCAGATCTTTGTCAAGACTTTGACTGGCAAGACCATCACTCTTGAAGTCGAGTCTTCG 71351 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| || || | ||||| || |||||||| | || || Sbjct 71350 GACACCATCGACAACG-TCAAGGCCAAGATCCAGGACAAGGAAGGCATCCCTCCCGATCA 71292 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| ||||| ||||| || |||| ||||| || || ||||| Sbjct 71291 GCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAAGACGGCCGCACTCTTTCAGATTACAA 71232 Query 40869 CATCCAGAAGGAGGCCACGCTGCAT 40893 |||||||||||| |||| || ||| Sbjct 71231 CATCCAGAAGGAATCCACACTTCAT 71207 >seq33 Length=194022 Score = 125 bits (138), Expect = 7e-24 Identities = 162/221 (73%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745 ||| ||||| || || || || || || |||||||| ||||||||| | || || || | Sbjct 184111 AAAGATGCAGATCTTTGTTAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTGGAGTC 184170 Query 40746 CACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGG 40804 | |||| | | | |||| |||||| || || | ||||| || ||||| ||| | | Sbjct 184171 TTCGGACACCATCGACAACG-TCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTG 184229 Query 40805 ACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 40864 | ||||| || ||||||| ||| || || ||||| || || | |||||||| |||| Sbjct 184230 ATCAGCAGCGTCTCATCTTCGCCGGTAAGCAGCTCGAAGATGGACGCACCCTTTCGGACT 184289 Query 40865 ACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGC 40905 ||||||||||||||||| | || || || || ||| | ||| Sbjct 184290 ACAACATCCAGAAGGAGTCGACCCTTCACCTCGTGCTCCGC 184330 >seq24 Length=214592 Score = 113 bits (124), Expect = 5e-20 Identities = 138/186 (74%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 40714 ACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAGGA 40772 || || || ||||||||| | || || || | |||||| | | | |||| | |||| Sbjct 73570 ACAGGTAAGACCATCACCCTTGAGGTGGAGTCTTCCGACACCATCGACAACGTT-AAGGC 73512 Query 40773 AAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAA 40832 || || | ||||| ||||| |||||| | |||||||| || ||||||| ||| || || Sbjct 73511 CAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGTCTCATCTTCGCCGGTAA 73452 Query 40833 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892 ||||| || |||| |||||||| ||||||||||||||||||||| | || || || Sbjct 73451 GCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCGACCCTTCA 73392 Query 40893 TCTAGT 40898 || || Sbjct 73391 CCTCGT 73386 >seq11049 Length=215 Score = 95.1 bits (104), Expect = 1e-14 Identities = 87/110 (79%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 40795 ATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACC 40854 |||||| | |||||||| || ||||||| || || || ||||| || |||| ||||| Sbjct 2 ATCCCCCCTGACCAGCAGCGTCTCATCTTTGCTGGTAAGCAGCTTGAAGACGGCCGCACG 61 Query 40855 CTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||| ||||||||||||||||||||| | || || || || |||||||| Sbjct 62 CTCTCGGACTACAACATCCAGAAGGAGTCGACACTTCACCTTGTGTTGCG 111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515136507318400