Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09-
20] 12,840 sequences; 23,769,677 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq69 342 5e-89
seq144 140 3e-28
seq62 132 5e-26
seq33 125 7e-24
seq24 113 5e-20
seq11049 95.1 1e-14
>seq69
Length=107628
Score = 342 bits (378), Expect = 5e-89
Identities = 425/579 (73%), Gaps = 15/579 (3%)
Strand=Plus/Plus
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
|| |||| |||||||| |||||||| || || |||||||||| ||| ||| | |||||
Sbjct 12064 ATCTGGCAAATGTACAAGAAGGCCGAAGCCTCCTTCTGGACCGCCGAAGAGATCGACCTT 12123
Query 116696 TCCAAGGA----CACGA--GCGACTGGGAGCGCTTGAACGACAACGAGCGCCATTTCATC 116749
|||||||| ||||| | ||| ||| | |||||||||||||| || ||||||
Sbjct 12124 TCCAAGGATCTTCACGATTGGGACAACAAGCTC---AACGACAACGAGCGTCACTTCATC 12180
Query 116750 AAGCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAG 116809
||||| || ||||| |||||||| |||||| ||||| ||||||||||| ||||||
Sbjct 12181 TCTCACGTCCTTGCCTTCTTCGCCGCTTCCGACGGTATCGTTAACGAGAATCTCGTCGAG 12240
Query 116810 CGTTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCC 116869
|| ||| | || || || | ||||| || || ||||||||||| || ||||||
Sbjct 12241 CGATTCTCCTCTGAAGTCCAAGCCGCCGAAGCTCGCTGCTTCTACGGTTTCCAGATCATG 12300
Query 116870 ATGGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCG 116929
||||||||| | ||||| |||| || || |||||||||||| ||| | ||| |
Sbjct 12301 ATGGAGAACATCCACTCCGAAACCTACTCCCTCCTCATCGACACCTACATCCGCGAACCC 12360
Query 116930 GAGGAGA---AGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAG 116986
||| || || ||| | || ||||| ||||||| || || |||||| | ||
Sbjct 12361 GAGCAGCGCGAGTTCC---TCTTCGACGCCGTCGAGACCATCCCCGTCGTCAAGCAAAAA 12417
Query 116987 GCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTG 117046
||||| ||||| || || |||||| | | | | ||| | || | ||| || || ||
Sbjct 12418 GCCGACTGGGCTCTTCGTTGGATCTCGGACCGTCGCGCCACTTTTGCCGAACGTCTCGTC 12477
Query 117047 GCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTC 117106
|| ||||| |||||||| || ||||||| || || ||||| |||| || ||||||
Sbjct 12478 GCTTTCGCCGCCGTCGAAGGTATCTTCTTCTCCGGTTCGTTCGCTTCCATCTTCTGGCTC 12537
Query 117107 AAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAG 117166
||||| || || ||||||||||| || |||||| ||||||||||||||| | || |||
Sbjct 12538 AAGAAGCGTGGTCTCATGCCCGGTCTCACTTTCTCCAACGAGCTCATCTCGCGTGATGAG 12597
Query 117167 GGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCAT 117205
|| |||| |||||||||||| ||||| ||| ||||
Sbjct 12598 GGCATGCACACCGACTTTGCCTGCTTGCTCTTCTCGCAT 12636
>seq144
Length=29207
Score = 140 bits (154), Expect = 3e-28
Identities = 155/204 (76%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || || || || || ||||||||| |||| || || | ||
Sbjct 7957 ATGCAGATCTTTGTCAAGACTCTGACCGGTAAGACCATCACCCTCGAGGTGGAGTCTTCC 8016
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| |||||| ||||||| ||||| ||||| ||||| | |||||
Sbjct 8017 GACACCATTGACAACG-TCAAGGCCAAAATTCAGGACAAGGAGGGTATCCCTCCCGACCA 8075
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || ||||||| ||| || |||||| |||| || | || |||||| ||||||||
Sbjct 8076 GCAGCGTCTCATCTTCGCTGGTAAACAGTTGGAAGATGGCCGAACCCTCTCGGACTACAA 8135
Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892
||||||||||||| |||| ||||
Sbjct 8136 CATCCAGAAGGAGTCCACCTTGCA 8159
Score = 134 bits (148), Expect = 1e-26
Identities = 168/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| || || || || ||||| || || |||||||| | || ||||| || |
Sbjct 8641 ATGCAAATCTTTGTCAAGACACTCACAGGAAAGACCATCACATTGGAAGTCGAGTCCTCG 8700
Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | || || | |||||| || |||| ||||| |||||||||||| | |||||
Sbjct 8701 GACACGATTGACAATG-TCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCCCCTGACCA 8759
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || || |||| || || || ||| |||| || | |||||||| ||||||||
Sbjct 8760 GCAGCGTCTTATCTTTGCAGGTAAGCAGTTGGAAGATGGTCGCACCCTTTCGGACTACAA 8819
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
||||||||||||| ||| || || || ||| | || ||| | || ||
Sbjct 8820 CATCCAGAAGGAGAGCACTCTTCACCTTGTGCTTCGTTTGCGCGGAGG 8867
Score = 129 bits (142), Expect = 6e-25
Identities = 161/217 (74%), Gaps = 3/217 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || |||||||| || || || |||||| |||| || || | |
Sbjct 8869 ATGCAGATCTTTGTCAAGACGCTCACTGGAAAGACGATCACCCTCGAGGTTGAGTCGTCG 8928
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGC-GGACC 40807
|||| | | | |||| |||||| || |||| ||||| |||| || ||| | |||||
Sbjct 8929 GACACCATTGACAACG-TCAAGGCCAAGATTCAAGACAAGGAGGATATTCCCCCTGGACC 8987
Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867
|||| || || |||| || || || ||| |||| |||| ||||||||| |||||||
Sbjct 8988 AGCAGCGTCTTATCTTTGCAGGTAAGCAGTTGGAAGACGGTCGCACCCTCTCGGACTACA 9047
Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904
|||||||||||||| ||| |||| || || |||||
Sbjct 9048 ACATCCAGAAGGAGAGCACTTTGCACCTTGTCTTGCG 9084
Score = 105 bits (116), Expect = 7e-18
Identities = 151/210 (72%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| ||||| || || ||||| ||||| || |||| ||||| | |
Sbjct 8413 ATGCAGATCTTCGTCAAAACCCTTACAGGCAAGACCATTACTCTCGAGGTCGAGTCTTCT 8472
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | | | | |||| | |||| || || | ||||| || ||||| || | || ||
Sbjct 8473 GATACCATCGACAACG-TAAAGGCCAAGATCCAGGACAAGGAAGGCATTCCACCTGATCA 8531
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
|||||| ||||||| || || || || || || |||| || || ||| |||||||||
Sbjct 8532 GCAACGCCTCATCTTTGCTGGAAAGCAACTTGAGGACGGCCGAACACTCTCCGACTACAA 8591
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
||| || |||||| |||||| || || ||
Sbjct 8592 CATTCAAAAGGAGAGCACGCTTCACCTCGT 8621
Score = 96.9 bits (106), Expect = 4e-15
Identities = 149/210 (71%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || | || ||||| ||||| || |||| || || | |
Sbjct 8185 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATTACTCTCGAGGTTGAGTCGTCT 8244
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | |||| |||||| || |||| ||||| || ||||| || | || ||
Sbjct 8245 GACACTATCGATAACG-TCAAGGCCAAGATTCAGGACAAGGAAGGCATTCCTCCCGATCA 8303
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || ||||| | ||| || || ||||| || |||| |||||| | ||| |||||
Sbjct 8304 GCAGCGTCTCATTTTCGCCGGAAAGCAGCTTGAGGACGGCCGCACCTTGTCCGATTACAA 8363
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
||||||||| || | || || ||||| ||
Sbjct 8364 CATCCAGAAAGAATCGACCCTCCATCTCGT 8393
>seq62
Length=118391
Score = 132 bits (146), Expect = 5e-26
Identities = 157/210 (75%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || ||||| ||||| ||||||||| |||| || || || |
Sbjct 71638 ATGCAGATCTTTGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTTGAGTCCTCG 71579
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| |||||| || |||| || || ||||| ||||| | |||||
Sbjct 71578 GACACCATTGACAACG-TCAAGGCCAAGATTCAGGATAAGGAGGGTATCCCACCTGACCA 71520
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || || |||| || || || ||||| || || | ||||||||| ||||||||
Sbjct 71519 GCAGCGTCTTATCTTTGCTGGTAAGCAGCTCGAGGATGGCCGCACCCTCTCGGACTACAA 71460
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
||||||||||||| |||| || || || ||
Sbjct 71459 CATCCAGAAGGAGTCCACTCTTCACCTCGT 71430
Score = 111 bits (122), Expect = 2e-19
Identities = 149/205 (73%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || | || ||||| |||||||| | || ||||| | |
Sbjct 71410 ATGCAGATCTTTGTCAAGACTTTGACTGGCAAGACCATCACTCTTGAAGTCGAGTCTTCG 71351
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| |||||| || || | ||||| || |||||||| | || ||
Sbjct 71350 GACACCATCGACAACG-TCAAGGCCAAGATCCAGGACAAGGAAGGCATCCCTCCCGATCA 71292
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || ||||||| ||| ||||| ||||| || |||| ||||| || || |||||
Sbjct 71291 GCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAAGACGGCCGCACTCTTTCAGATTACAA 71232
Query 40869 CATCCAGAAGGAGGCCACGCTGCAT 40893
|||||||||||| |||| || |||
Sbjct 71231 CATCCAGAAGGAATCCACACTTCAT 71207
>seq33
Length=194022
Score = 125 bits (138), Expect = 7e-24
Identities = 162/221 (73%), Gaps = 2/221 (1%)
Strand=Plus/Plus
Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745
||| ||||| || || || || || || |||||||| ||||||||| | || || || |
Sbjct 184111 AAAGATGCAGATCTTTGTTAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTGGAGTC 184170
Query 40746 CACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGG 40804
| |||| | | | |||| |||||| || || | ||||| || ||||| ||| | |
Sbjct 184171 TTCGGACACCATCGACAACG-TCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTG 184229
Query 40805 ACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 40864
| ||||| || ||||||| ||| || || ||||| || || | |||||||| ||||
Sbjct 184230 ATCAGCAGCGTCTCATCTTCGCCGGTAAGCAGCTCGAAGATGGACGCACCCTTTCGGACT 184289
Query 40865 ACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGC 40905
||||||||||||||||| | || || || || ||| | |||
Sbjct 184290 ACAACATCCAGAAGGAGTCGACCCTTCACCTCGTGCTCCGC 184330
>seq24
Length=214592
Score = 113 bits (124), Expect = 5e-20
Identities = 138/186 (74%), Gaps = 2/186 (1%)
Strand=Plus/Minus
Query 40714 ACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAGGA 40772
|| || || ||||||||| | || || || | |||||| | | | |||| | ||||
Sbjct 73570 ACAGGTAAGACCATCACCCTTGAGGTGGAGTCTTCCGACACCATCGACAACGTT-AAGGC 73512
Query 40773 AAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAA 40832
|| || | ||||| ||||| |||||| | |||||||| || ||||||| ||| || ||
Sbjct 73511 CAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGTCTCATCTTCGCCGGTAA 73452
Query 40833 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892
||||| || |||| |||||||| ||||||||||||||||||||| | || || ||
Sbjct 73451 GCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCGACCCTTCA 73392
Query 40893 TCTAGT 40898
|| ||
Sbjct 73391 CCTCGT 73386
>seq11049
Length=215
Score = 95.1 bits (104), Expect = 1e-14
Identities = 87/110 (79%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 40795 ATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACC 40854
|||||| | |||||||| || ||||||| || || || ||||| || |||| |||||
Sbjct 2 ATCCCCCCTGACCAGCAGCGTCTCATCTTTGCTGGTAAGCAGCTTGAAGACGGCCGCACG 61
Query 40855 CTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904
||| ||||||||||||||||||||| | || || || || ||||||||
Sbjct 62 CTCTCGGACTACAACATCCAGAAGGAGTCGACACTTCACCTTGTGTTGCG 111
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515136507318400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |