Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09- 20] 12,840 sequences; 23,769,677 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq81 149 1e-30 >seq81 Length=91273 Score = 149 bits (164), Expect = 1e-30 Identities = 390/592 (66%), Gaps = 5/592 (1%) Strand=Plus/Plus Query 248818 TACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAG 248877 ||| | ||||| | |||||| || || ||| ||| || || ||| ||| | |||||| Sbjct 56258 TACAACTTCTTCGGTTTCAAGACCCTCGAGCGATCCTACCTTCTCCGTATTAACGGCAAG 56317 Query 248878 ATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGAC 248937 | | || || ||||||||| | ||||| || ||||| || || ||| || ||| Sbjct 56318 GTTGCTGAGCGTCCCCAGCACATGCTCATGCGTGTCGCTGTTGGTATCCACGGCGAGGAC 56377 Query 248938 ATAGAGAGCGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACA 248997 || || |||| ||||||| |||| ||| | | | ||||| || | Sbjct 56378 ATCGAAAGCGCCATCGAGACCTACAATCTCATGTCGCAGAAGTTCTTCACACACGCTTCC 56437 Query 248998 CCGACGCTCTTCAACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCC 249057 || || ||||||||||| ||||| | || ||||| ||||| || ||| | || Sbjct 56438 CCCACCCTCTTCAACGCTGGTACTCCCCACCCCCAGCTCTCGTCGTGTTTCCTTGTCACC 56497 Query 249058 ATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAA-ACAGACGGCGAAGATTTC 249116 ||| | || ||||| ||||||| || || ||||| || || || | || | ||| || Sbjct 56498 ATGAAGGATGACTCGATCGACGGTATCTACGACACCCTCAAGACCTGC-GCCATGATCTC 56556 Query 249117 TAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTACAT 249176 || ||| || || ||||||||| | || ||||||||||| | || || ||||| Sbjct 56557 CAAGACCGCTGGTGGTATCGGTCTCAACATCCACAACATCCGAGGAACTGGCTCCTACAT 56616 Query 249177 CAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTCCAC 249236 ||||| ||||| ||||| | |||||||| ||| | || || ||| | ||| Sbjct 56617 TGCCGGTACCAATGGTGTCAGCAACGGTATCGTTCCCATGCTCCGTGTCTTCAACAACAC 56676 Query 249237 CGCCAGGTTCATCAACCAGGCCGGGCGC---CGAAAGGGGTCGTTCGCCATGTATTTGGA 249293 || | | | | |||||| || | || || | || ||||| || | || Sbjct 56677 TGCACGATACGTTGACCAGGGTGGTAACAAGCGTCCCGGTGCCTTTGCCATCTACATTGA 56736 Query 249294 AGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGAGCT 249353 |||||| | ||| | || |||||||| ||| | |||||| |||| || ||| Sbjct 56737 GCCTTGGCACTCGGATGTCTTCGAGTTCCTTGACCTCCGCAAGAACCACGGTAAGGAGGA 56796 Query 249354 CATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATG 249405 | | || ||||| |||||||||| ||| ||||| |||| | |||||| Sbjct 56797 GGTACGTGCCCGTGAGCTCTTCTACGCCCTCTGGGTTCCCGATCTCTTCATG 56848 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073589752005120