Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09-
20] 12,840 sequences; 23,769,677 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq144 131 1e-25
seq33 95.1 1e-14
seq62 89.7 4e-13
seq24 82.4 6e-11
>seq144
Length=29207
Score = 131 bits (144), Expect = 1e-25
Identities = 155/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||||||||| ||| ||||||||| ||||||||||| || || | || |||
Sbjct 8165 ACCAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTTCGGCCATCTTCC 8106
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
| ||||| || ||||| || | ||||| ||||||||||| | ||||||||||||| |
Sbjct 8105 AACTGTTTACCAGCGAAGATGAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGA 8046
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
||||| ||| || | | | |||| | ||||||||| | ||| || |||||
Sbjct 8045 ATTTTGGCCTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTA 7986
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|| ||||||||||| |||||||| ||||||
Sbjct 7985 CCGGTCAGAGTCTTGACAAAGATCTGCATG 7956
Score = 96.9 bits (106), Expect = 3e-15
Identities = 150/213 (70%), Gaps = 1/213 (0%)
Strand=Plus/Minus
Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184
|| || | ||||| |||||||||||||| ||||||||||| || |||| ||||
Sbjct 9081 AAGACAAGGTGCAAAGTGCTCTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGACCGTCT 9022
Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGT-CGGGAGGCACACCCTCCTTGTC 45243
|||| || || || || || || | ||||| |||| | || || | | ||||||||||
Sbjct 9021 TCCAACTGCTTACCTGCAAAGATAAGACGCTGCTGGTCCAGGGGGAATATCCTCCTTGTC 8962
Query 45244 CGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGT 45303
||| || ||| || | | | ||||| ||| ||||| | ||| |||||
Sbjct 8961 TTGAATCTTGGCCTTGACGTTGTCAATGGTGTCCGACGACTCAACCTCGAGGGTGATCGT 8902
Query 45304 CTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
||| || || || ||||| |||||||| |||||
Sbjct 8901 CTTTCCAGTGAGCGTCTTGACAAAGATCTGCAT 8869
Score = 93.3 bits (102), Expect = 3e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192
||| || |||||||||||||| ||||||||||| || |||| | || |||| ||
Sbjct 8844 GTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGACCATCTTCCAACTG 8785
Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252
|| || || || || | ||||| ||||| || || | |||||||||||| ||| ||
Sbjct 8784 CTTACCTGCAAAGATAAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGAATCTT 8725
Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312
||| || | | ||||| ||| || |||| || || ||||| || ||
Sbjct 8724 GGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACTTCCAATGTGATGGTCTTTCCTGT 8665
Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336
|| ||||| ||||||||||||||
Sbjct 8664 GAGTGTCTTGACAAAGATTTGCAT 8641
>seq33
Length=194022
Score = 95.1 bits (104), Expect = 1e-14
Identities = 138/195 (71%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204
||||||||| ||||||||||| || ||| | || || || || || ||||||||
Sbjct 184306 CTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGTCCATCTTCGAGCTGCTTACCGGCGAA 184247
Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264
|| | ||||| || || || || | || ||||||||| || || ||| ||
Sbjct 184246 GATGAGACGCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTT 184187
Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324
| | | ||||| | ||||||||| | ||| || ||||||||||| || ||||| ||
Sbjct 184186 GTCGATGGTGTCCGAAGACTCCACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTAAC 184127
Query 45325 AAAGATTTGCATGTT 45339
|||||| ||||| ||
Sbjct 184126 AAAGATCTGCATCTT 184112
>seq62
Length=118391
Score = 89.7 bits (98), Expect = 4e-13
Identities = 142/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192
||| || ||| ||||||||| ||||||||||| || ||| | || || || ||
Sbjct 71435 GTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCATCCTCGAGCTG 71494
Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252
|| || || || || | ||||| ||||| || || | ||||||||| ||| ||| ||
Sbjct 71495 CTTACCAGCAAAGATAAGACGCTGCTGGTCAGGTGGGATACCCTCCTTATCCTGAATCTT 71554
Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312
||| || | | | ||||| ||| ||||| | ||| || |||||||| ||
Sbjct 71555 GGCCTTGACGTTGTCAATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCGGT 71614
Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336
|| ||||| |||||||| |||||
Sbjct 71615 GAGGGTCTTGACAAAGATCTGCAT 71638
>seq24
Length=214592
Score = 82.4 bits (90), Expect = 6e-11
Identities = 119/168 (71%), Gaps = 0/168 (0%)
Strand=Plus/Plus
Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204
||||||||| ||||||||||| || ||| |||| || || || || ||||||||
Sbjct 73403 CTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTACCGGCGAA 73462
Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264
|| | ||||| |||||||| || | ||||||||||||| || || ||||||
Sbjct 73463 GATGAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTAACGTT 73522
Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312
| | | |||| | ||||||||| | ||| || ||||| || ||
Sbjct 73523 GTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATGGTCTTACCTGT 73570
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395013375669640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |