Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09- 20] 12,840 sequences; 23,769,677 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq81 100 6e-16 >seq81 Length=91273 Score = 100 bits (110), Expect = 6e-16 Identities = 175/255 (69%), Gaps = 0/255 (0%) Strand=Plus/Minus Query 94786 CCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCC 94845 |||| || ||||| ||||||||||| || || ||| || || || || ||||| Sbjct 56577 CCGATACCACCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATACCG 56518 Query 94846 TCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTT 94905 || || ||||| | | | | |||||| ||||| || || ||||| | || Sbjct 56517 TCGATCGAGTCATCCTTCATGGTGACAAGGAAACACGACGAGAGCTGGGGGTGGGGAGTA 56458 Query 94906 CCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATAT 94965 ||| || || || ||||||||||| || || || | | | ||||||||||| || Sbjct 56457 CCAGCGTTGAAGAGGGTGGGGGAAGCGTGTGTGAAGAACTTCTGCGACATGAGATTGTAG 56398 Query 94966 GTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATG 95025 || || ||| | || |||||| ||||| || || ||||| |||||||| | |||| Sbjct 56397 GTCTCGATGGCGCTTTCGATGTCCTCGCCGTGGATACCAACAGCGACACGCATGAGCATG 56338 Query 95026 TCCTGAGGGCGCTCA 95040 | ||| || |||||| Sbjct 56337 TGCTGGGGACGCTCA 56323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989421201062200