Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09-
20] 12,840 sequences; 23,769,677 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq81 168 8e-37
seq69 98.7 1e-15
>seq81
Length=91273
Score = 168 bits (186), Expect = 8e-37
Identities = 623/960 (65%), Gaps = 26/960 (3%)
Strand=Plus/Minus
Query 63222 GGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAG 63281
||||| || | || ||||| | |||||| || |||| | || || | ||||| |||
Sbjct 56901 GGACACTCGTTAGGGCACATGAGCGACCAGTCACCGTTCTGCTCGACCCTCTTCATGAAG 56842
Query 63282 AGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGT--TTCCTG 63339
||||| |||| ||| || || || | ||| ||| | | | || |||| | || | |
Sbjct 56841 AGATCGGGAACCCAGAGGGCG-TAGA-AGAGCTCACGGGC-ACGTACCTCCTCCTTACCG 56785
Query 63340 TA-TTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 63398
| ||||| || || |||||| | | | ||| || ||||| || || | ||| |||
Sbjct 56784 TGGTTCTTGCGGAGGTCAAGGAACTCGAAGACATCCGAGTGCCAAGGCTCAATGTAGATG 56725
Query 63399 GCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 63458
|| | | || || || ||||| || ||||| || | ||||| || ||||| || |
Sbjct 56724 GCAAAGGCACCGGGACGCTTGTTACCACCCTGGTCAACGTATCGTGCAGTGTTGTTGAAG 56665
Query 63459 ACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCA 63518
|| | | ||| |||| |||||||| | |||||||||||||| || ||| |||
Sbjct 56664 ACACGGAGCATGGGAACGATACCGTTGCTGACACCATTGGTACCGGCAATGTAGGAGCCA 56605
Query 63519 CTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCG 63578
| | || || || || ||||| || || || || | || ||||| | |||
Sbjct 56604 GTTCCTCGGATGTTGTGGATGTTGAGACCGATACCACCAGCGGTCTTGGAGATCATGGCG 56545
Query 63579 CATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAA 63638
|| || | ||||| ||||| || || || ||||| ||||| | | || |||
Sbjct 56544 CAGGTCTTGAGGGTGTCGTAGATACCGTCGATCGAGTCATCCTTCATGGTGACAAGGAAA 56485
Query 63639 CAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTA 63698
|| || | ||| | | | ||| || || || || | ||| || |||||||| ||
Sbjct 56484 CACGACGAGAGCTGGGGGTGGGGAGTACCAGCGTTGAAGAGGGTGGGGGAAGCGTGTGTG 56425
Query 63699 AACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGA 63758
|| | || | || | |||||||| ||||| || || || || ||| ||
Sbjct 56424 AAGAACTTCTGCGACATGAGATTGTAGGTCTCGATGGCGCTTTCGATGTCCTCGCCGTGG 56365
Query 63759 ATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATT 63818
|| || || ||||||||||| | ||||||||| || | ||| ||| ||| ||| ||
Sbjct 56364 ATACCAACAGCGACACGCATGAGCATGTGCTGGGGACGCTCAGCAACCTTGCCGTTAATA 56305
Query 63819 TTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGT 63878
| | ||||||| || | || || ||||| || ||||||| ||||| ||
Sbjct 56304 CGGAGAAGGTAGGATCGCTCGAGGGTCTTGAAACCGAAGAAGTTGTAGTGGAAGTCGCGC 56245
Query 63879 TCGTAAATAATAACCGAATTGAGCTTATCCTTATATTTGTTAACTATATCCATGGTAA-T 63937
|||||||| || |||| | ||||| |||||| | || | || | | |||||| |
Sbjct 56244 TCGTAAATGATTGCCGAGTCGAGCTGATCCTTGTGCTTCATGACAA----CCTGGTAAGT 56189
Query 63938 AC---TTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATC 63994
| || || || || || || ||||| || || || | || | | | | ||
Sbjct 56188 GCCGTCCGAGATCATGGGGCTGTGCTTGCCATTCTTGGGGTTGATGTACTCGTAGAGGTC 56129
Query 63995 CTCCATCACTTCACTAAATAGttttt--ttGTTTCCTTGTGTAGATTTGAT-ATGGCTAT 64051
|| | || || | ||||||| | ||||||||||| | | ||| | || || ||
Sbjct 56128 CTGAACGGTTTGGCTGA--AGTTTTTGCTGGTTTCCTTGTGCA-AGTTGCTGATAGCGAT 56072
Query 64052 TCTGGCGGCTAGAATGGCATAATCCGGAT--GTTG-TGTAGTACAAGTGGCTGCTATTTC 64108
| || || |||| ||||||||||| | |||| ||| | ||| ||| | ||||
Sbjct 56071 ACGCGCAGCAAGAACAGCATAATCCGGGTGGGTTGTTGTCTTGTAAGCGGCAG---TTTC 56015
Query 64109 GGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGAATAACCTT 64168
|| |||| |||| | ||||| || || || || | || || || | ||| |||||
Sbjct 56014 AGCGGCCAAGTTGTCAAGCTCTACGGTGGTAACACCCTCGTAGATGCCGTCAATGACCTT 55955
>seq69
Length=107628
Score = 98.7 bits (108), Expect = 1e-15
Identities = 110/147 (75%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 33578 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGT 33637
||| || || || ||| ||||| ||||| || | || | ||||| || || ||
Sbjct 12624 CAAGCAGGCAAAGTCGGTGTGCATGCCCTCATCACGCGAGATGAGCTCGTTGGAGAAAGT 12565
Query 33638 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAA 33697
||| |||||||| || |||||||| || ||||| || ||||||||||| || ||||| ||
Sbjct 12564 GAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAACGAACCGGAGAA 12505
Query 33698 GAAGATTCCTTCTACTGCAGCAAAGGC 33724
|||||| ||||| || || || || ||
Sbjct 12504 GAAGATACCTTCGACGGCGGCGAAAGC 12478
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629716514275200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |