Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09-
20] 12,840 sequences; 23,769,677 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq81 156 6e-33
>seq81
Length=91273
Score = 156 bits (172), Expect = 6e-33
Identities = 587/918 (64%), Gaps = 2/918 (0%)
Strand=Plus/Minus
Query 65787 ATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTT 65846
|| ||||| |||||||| || ||||||||||| || | || | || || |||||
Sbjct 57129 ATGATCTCTGTGCAAAGGTTGGAGCACTTGATGGTACCGAGGTTCTTCTGGTTGCTCTTG 57070
Query 65847 TTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATA 65906
||| || ||||| ||||| ||||| || ||||||| || |||| || || |
Sbjct 57069 CGGTTGGCAGCGTCCTTGTAAAGGATGAAGGGGTTACCAGTCTCGGTCTGGGACTCGAGG 57010
Query 65907 ATCGCTTTCCAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCTTTTCTCTTTCGTA 65965
|| || | ||||| | || ||||||| | | ||| | | || |||||
Sbjct 57009 ATGGCGTACCAGA-GCTTCTGAGCCTTGACGGTGCGCTTGGAGCGACCCTCGGCCTCGTA 56951
Query 65966 TAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATC 66025
| || | || || ||||| || || | | | | || ||||| || |
Sbjct 56950 GCGCTCGTAGAGACGCTCAAACTCCTCGCCGTAGCAGTCAGCGAGACCGGGACACTCGTT 56891
Query 66026 CGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAAT 66085
|| ||||| | |||||| || |||| | || || | ||||| |||||||| ||||
Sbjct 56890 AGGGCACATGAGCGACCAGTCACCGTTCTGCTCGACCCTCTTCATGAAGAGATCGGGAAC 56831
Query 66086 CCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAG 66145
||| || || || | || | || | ||||| || || ||||| ||
Sbjct 56830 CCAGAGGGCGTAGAAGAGCTCACGGGCACGTACCTCCTCCTTACCGTGGTTCTTGCGGAG 56771
Query 66146 ATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGG 66205
|| |||||| | | | ||| | ||||| || || | ||| ||||| | | || ||
Sbjct 56770 GTCAAGGAACTCGAAGACATCCGAGTGCCAAGGCTCAATGTAGATGGCAAAGGCACCGGG 56711
Query 66206 CCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 66265
|| ||||| || ||||| || | ||||| || ||||| || | || | | ||| ||
Sbjct 56710 ACGCTTGTTACCACCCTGGTCAACGTATCGTGCAGTGTTGTTGAAGACACGGAGCATGGG 56651
Query 66266 AATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATT 66325
|| ||||| ||| ||||||||| |||| || ||| ||| || | || || ||
Sbjct 56650 AACGATACCGTTGCTGACACCATTGGTACCGGCAATGTAGGAGCCAGTTCCTCGGATGTT 56591
Query 66326 ACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGT 66385
|| ||||| || || || || | || ||||| | ||||| || | ||
Sbjct 56590 GTGGATGTTGAGACCGATACCACCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGGGT 56531
Query 66386 ATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTG 66445
|| ||||| || || || |||||| ||||| | | || ||||| || | ||
Sbjct 56530 GTCGTAGATACCGTCGATCGAGTCATCCTTCATGGTGACAAGGAAACACGACGAGAGCTG 56471
Query 66446 GTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGA 66505
| | | ||| || || || || | ||| || |||||||| || || | || | ||
Sbjct 56470 GGGGTGGGGAGTACCAGCGTTGAAGAGGGTGGGGGAAGCGTGTGTGAAGAACTTCTGCGA 56411
Query 66506 AAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGAC 66565
| |||||||| ||||| || || || || ||| || || || || |||||
Sbjct 56410 CATGAGATTGTAGGTCTCGATGGCGCTTTCGATGTCCTCGCCGTGGATACCAACAGCGAC 56351
Query 66566 ACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGA 66625
|||||| | ||||||||| || | ||| | | |||| ||| || | | ||||||
Sbjct 56350 ACGCATGAGCATGTGCTGGGGACGCTCAGCAACCTTGCCGTTAATACGGAGAAGGTAGGA 56291
Query 66626 TTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAAC 66685
| || | || || ||||| || ||||||| ||||| || |||||||| || |
Sbjct 56290 TCGCTCGAGGGTCTTGAAACCGAAGAAGTTGTAGTGGAAGTCGCGCTCGTAAATGATTGC 56231
Query 66686 CGAGTTGAGTTTATCCTT 66703
||||| ||| | ||||||
Sbjct 56230 CGAGTCGAGCTGATCCTT 56213
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658067163265600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |