Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09- 20] 12,840 sequences; 23,769,677 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq81 159 5e-34 >seq81 Length=91273 Score = 159 bits (176), Expect = 5e-34 Identities = 590/919 (64%), Gaps = 4/919 (0%) Strand=Plus/Minus Query 71749 ATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTT 71808 || || || |||||||| || ||||||||||| || | || | || || ||||| Sbjct 57129 ATGATCTCTGTGCAAAGGTTGGAGCACTTGATGGTACCGAGGTTCTTCTGGTTGCTCTTG 57070 Query 71809 TTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATA 71868 ||| || ||||| ||||| || || || ||||||| || |||| || || | Sbjct 57069 CGGTTGGCAGCGTCCTTGTAAAGGATGAAGGGGTTACCAGTCTCGGTCTGGGACTCGAGG 57010 Query 71869 ATCGCTTTCCAGACGACTC-GAGCCTTTATTATATTCTTGTATCTCTTTTCTCTTTCGTA 71927 || || | ||||| | || ||||||| | | |||| | | || ||||| Sbjct 57009 ATGGCGTACCAGA-GCTTCTGAGCCTTGACGGTGCGCTTGGAGCGACCCTCGGCCTCGTA 56951 Query 71928 TTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGT-CTAATCCAGGACATTCAT 71986 | || | || || ||||| || || | ||| | | | || ||||| || | Sbjct 56950 GCGCTCGTAGAGACGCTCAAACTCCTCGCCGTA-GCAGTCAGCGAGACCGGGACACTCGT 56892 Query 71987 TCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAA 72046 | || ||||| | ||||| || || | | | || | ||||| |||||||| |||| Sbjct 56891 TAGGGCACATGAGCGACCAGTCACCGTTCTGCTCGACCCTCTTCATGAAGAGATCGGGAA 56832 Query 72047 TCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAA 72106 ||| || || || || || | || | |||||| || || ||||| | Sbjct 56831 CCCAGAGGGCGTAGAAGAGCTCACGGGCACGTACCTCCTCCTTACCGTGGTTCTTGCGGA 56772 Query 72107 GATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCG 72166 | || |||||| | | | ||| || ||||| || || | ||| ||||| | | || | Sbjct 56771 GGTCAAGGAACTCGAAGACATCCGAGTGCCAAGGCTCAATGTAGATGGCAAAGGCACCGG 56712 Query 72167 GCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTG 72226 | || ||||| || ||||| || | ||||| || ||||| || | || | | ||| | Sbjct 56711 GACGCTTGTTACCACCCTGGTCAACGTATCGTGCAGTGTTGTTGAAGACACGGAGCATGG 56652 Query 72227 GAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATAT 72286 ||| ||||| ||| |||||||||| |||| || ||| ||| | | || || | Sbjct 56651 GAACGATACCGTTGCTGACACCATTGGTACCGGCAATGTAGGAGCCAGTTCCTCGGATGT 56592 Query 72287 TGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG 72346 || || ||||| || || || || | || ||||| | ||||| || | | Sbjct 56591 TGTGGATGTTGAGACCGATACCACCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGGG 56532 Query 72347 TATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTT 72406 | || ||||| || || || |||||| ||||| | | || ||||| || | | Sbjct 56531 TGTCGTAGATACCGTCGATCGAGTCATCCTTCATGGTGACAAGGAAACACGACGAGAGCT 56472 Query 72407 GGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAG 72466 || | | ||| || || || || | ||| || |||||||| || || | || | | Sbjct 56471 GGGGGTGGGGAGTACCAGCGTTGAAGAGGGTGGGGGAAGCGTGTGTGAAGAACTTCTGCG 56412 Query 72467 ACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGA 72526 ||| |||||||| ||||| || || ||| || ||| || || || || |||| Sbjct 56411 ACATGAGATTGTAGGTCTCGATGGCGCTTTCGATGTCCTCGCCGTGGATACCAACAGCGA 56352 Query 72527 CACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGG 72586 ||||||| | ||| ||||| || | ||| | | |||| || || | | ||||| Sbjct 56351 CACGCATGAGCATGTGCTGGGGACGCTCAGCAACCTTGCCGTTAATACGGAGAAGGTAGG 56292 Query 72587 ATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAA 72646 || || | || || ||||| || ||||||| ||||| || |||||||| || Sbjct 56291 ATCGCTCGAGGGTCTTGAAACCGAAGAAGTTGTAGTGGAAGTCGCGCTCGTAAATGATTG 56232 Query 72647 CCGAATTGAGTTTATCCTT 72665 |||| | ||| | |||||| Sbjct 56231 CCGAGTCGAGCTGATCCTT 56213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671031482158400