Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09-
20] 12,840 sequences; 23,769,677 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq81 159 5e-34
>seq81
Length=91273
Score = 159 bits (176), Expect = 5e-34
Identities = 590/919 (64%), Gaps = 4/919 (0%)
Strand=Plus/Minus
Query 71749 ATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTT 71808
|| || || |||||||| || ||||||||||| || | || | || || |||||
Sbjct 57129 ATGATCTCTGTGCAAAGGTTGGAGCACTTGATGGTACCGAGGTTCTTCTGGTTGCTCTTG 57070
Query 71809 TTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATA 71868
||| || ||||| ||||| || || || ||||||| || |||| || || |
Sbjct 57069 CGGTTGGCAGCGTCCTTGTAAAGGATGAAGGGGTTACCAGTCTCGGTCTGGGACTCGAGG 57010
Query 71869 ATCGCTTTCCAGACGACTC-GAGCCTTTATTATATTCTTGTATCTCTTTTCTCTTTCGTA 71927
|| || | ||||| | || ||||||| | | |||| | | || |||||
Sbjct 57009 ATGGCGTACCAGA-GCTTCTGAGCCTTGACGGTGCGCTTGGAGCGACCCTCGGCCTCGTA 56951
Query 71928 TTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGT-CTAATCCAGGACATTCAT 71986
| || | || || ||||| || || | ||| | | | || ||||| || |
Sbjct 56950 GCGCTCGTAGAGACGCTCAAACTCCTCGCCGTA-GCAGTCAGCGAGACCGGGACACTCGT 56892
Query 71987 TCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAA 72046
| || ||||| | ||||| || || | | | || | ||||| |||||||| ||||
Sbjct 56891 TAGGGCACATGAGCGACCAGTCACCGTTCTGCTCGACCCTCTTCATGAAGAGATCGGGAA 56832
Query 72047 TCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAA 72106
||| || || || || || | || | |||||| || || ||||| |
Sbjct 56831 CCCAGAGGGCGTAGAAGAGCTCACGGGCACGTACCTCCTCCTTACCGTGGTTCTTGCGGA 56772
Query 72107 GATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCG 72166
| || |||||| | | | ||| || ||||| || || | ||| ||||| | | || |
Sbjct 56771 GGTCAAGGAACTCGAAGACATCCGAGTGCCAAGGCTCAATGTAGATGGCAAAGGCACCGG 56712
Query 72167 GCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTG 72226
| || ||||| || ||||| || | ||||| || ||||| || | || | | ||| |
Sbjct 56711 GACGCTTGTTACCACCCTGGTCAACGTATCGTGCAGTGTTGTTGAAGACACGGAGCATGG 56652
Query 72227 GAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATAT 72286
||| ||||| ||| |||||||||| |||| || ||| ||| | | || || |
Sbjct 56651 GAACGATACCGTTGCTGACACCATTGGTACCGGCAATGTAGGAGCCAGTTCCTCGGATGT 56592
Query 72287 TGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG 72346
|| || ||||| || || || || | || ||||| | ||||| || | |
Sbjct 56591 TGTGGATGTTGAGACCGATACCACCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGGG 56532
Query 72347 TATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTT 72406
| || ||||| || || || |||||| ||||| | | || ||||| || | |
Sbjct 56531 TGTCGTAGATACCGTCGATCGAGTCATCCTTCATGGTGACAAGGAAACACGACGAGAGCT 56472
Query 72407 GGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAG 72466
|| | | ||| || || || || | ||| || |||||||| || || | || | |
Sbjct 56471 GGGGGTGGGGAGTACCAGCGTTGAAGAGGGTGGGGGAAGCGTGTGTGAAGAACTTCTGCG 56412
Query 72467 ACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGA 72526
||| |||||||| ||||| || || ||| || ||| || || || || ||||
Sbjct 56411 ACATGAGATTGTAGGTCTCGATGGCGCTTTCGATGTCCTCGCCGTGGATACCAACAGCGA 56352
Query 72527 CACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGG 72586
||||||| | ||| ||||| || | ||| | | |||| || || | | |||||
Sbjct 56351 CACGCATGAGCATGTGCTGGGGACGCTCAGCAACCTTGCCGTTAATACGGAGAAGGTAGG 56292
Query 72587 ATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAA 72646
|| || | || || ||||| || ||||||| ||||| || |||||||| ||
Sbjct 56291 ATCGCTCGAGGGTCTTGAAACCGAAGAAGTTGTAGTGGAAGTCGCGCTCGTAAATGATTG 56232
Query 72647 CCGAATTGAGTTTATCCTT 72665
|||| | ||| | ||||||
Sbjct 56231 CCGAGTCGAGCTGATCCTT 56213
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671031482158400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |