Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09-
20] 12,840 sequences; 23,769,677 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq144 141 2e-28
seq62 111 4e-19
>seq144
Length=29207
Score = 141 bits (156), Expect = 2e-28
Identities = 146/191 (76%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428
|| || ||||| || ||||| || || |||| ||||| || ||||| |||||||||||
Sbjct 8603 TCCTTTTGAATGTTGTAGTCGGAGAGTGTTCGGCCGTCCTCAAGTTGCTTTCCAGCAAAG 8544
Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488
|| || | || |||||||| || || ||||| || ||||| ||||| || ||||| ||
Sbjct 8543 ATGAGGCGTTGCTGATCAGGTGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTG 8484
Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548
|| | |||||| || || ||||| || ||||| ||||| || ||||| ||||| ||
Sbjct 8483 TCGATGGTATCAGAAGACTCGACCTCGAGAGTAATGGTCTTGCCTGTAAGGGTTTTGACG 8424
Query 104549 AATATCTGCAT 104559
|| ||||||||
Sbjct 8423 AAGATCTGCAT 8413
Score = 113 bits (124), Expect = 1e-19
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407
|| || ||||| | || ||||||||||| || || || || || | || | |||||
Sbjct 8396 AGAACGAGATGGAGGGTCGATTCTTTCTGGATGTTGTAATCGGACAAGGTGCGGCCGTCC 8337
Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467
|| || || ||||| || ||||| || | ||| ||||| ||||| || ||||| || |||
Sbjct 8336 TCAAGCTGCTTTCCGGCGAAAATGAGACGCTGCTGATCGGGAGGAATGCCTTCCTTGTCC 8277
Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527
|||||||| || || || || || | || || | || ||||| || ||||| |||
Sbjct 8276 TGAATCTTGGCCTTGACGTTATCGATAGTGTCAGACGACTCAACCTCGAGAGTAATGGTC 8217
Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || || | || || || || ||||||||
Sbjct 8216 TTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 8185
Score = 100 bits (110), Expect = 7e-16
Identities = 139/192 (72%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428
|| ||||| || || ||||| || || || | ||| ||||| | || || || |||||
Sbjct 8831 TCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGACCATCTTCCAACTGCTTACCTGCAAAG 8772
Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488
|| || | ||| || ||||| || || || || || ||||||||||| || || |||||
Sbjct 8771 ATAAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTG 8712
Query 104489 TCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTAC 104547
|| | || || | ||| || || || | ||| || ||||| || || ||||| || ||
Sbjct 8711 TCAATCGTGTC-CGAGGACTCGACTTCCAATGTGATGGTCTTTCCTGTGAGTGTCTTGAC 8653
Query 104548 AAATATCTGCAT 104559
||| || |||||
Sbjct 8652 AAAGATTTGCAT 8641
>seq62
Length=118391
Score = 111 bits (122), Expect = 4e-19
Identities = 145/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || ||||| || || ||||| || || || | || || || || || || |||
Sbjct 71442 GTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCATCCTCGAGCTGCTTACCA 71501
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || || | ||| || ||||| || || || || |||||||||||||| || ||
Sbjct 71502 GCAAAGATAAGACGCTGCTGGTCAGGTGGGATACCCTCCTTATCCTGAATCTTGGCCTTG 71561
Query 104483 ACATTTTCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541
|| || || | ||| || | ||| || ||||| || || || ||||| || || || ||
Sbjct 71562 ACGTTGTCAATGGTGTC-CGAGGACTCAACCTCGAGGGTGATGGTCTTGCCGGTGAGGGT 71620
Query 104542 TTTTACAAATATCTGCAT 104559
|| ||||| ||||||||
Sbjct 71621 CTTGACAAAGATCTGCAT 71638
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151208980570720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |