Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09- 20] 12,840 sequences; 23,769,677 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq144 141 2e-28 seq62 111 4e-19 >seq144 Length=29207 Score = 141 bits (156), Expect = 2e-28 Identities = 146/191 (76%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || || ||||| || ||||| || || |||| ||||| || ||||| ||||||||||| Sbjct 8603 TCCTTTTGAATGTTGTAGTCGGAGAGTGTTCGGCCGTCCTCAAGTTGCTTTCCAGCAAAG 8544 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || || | || |||||||| || || ||||| || ||||| ||||| || ||||| || Sbjct 8543 ATGAGGCGTTGCTGATCAGGTGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTG 8484 Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548 || | |||||| || || ||||| || ||||| ||||| || ||||| ||||| || Sbjct 8483 TCGATGGTATCAGAAGACTCGACCTCGAGAGTAATGGTCTTGCCTGTAAGGGTTTTGACG 8424 Query 104549 AATATCTGCAT 104559 || |||||||| Sbjct 8423 AAGATCTGCAT 8413 Score = 113 bits (124), Expect = 1e-19 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | || ||||||||||| || || || || || | || | ||||| Sbjct 8396 AGAACGAGATGGAGGGTCGATTCTTTCTGGATGTTGTAATCGGACAAGGTGCGGCCGTCC 8337 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || || || ||||| || ||||| || | ||| ||||| ||||| || ||||| || ||| Sbjct 8336 TCAAGCTGCTTTCCGGCGAAAATGAGACGCTGCTGATCGGGAGGAATGCCTTCCTTGTCC 8277 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 |||||||| || || || || || | || || | || ||||| || ||||| ||| Sbjct 8276 TGAATCTTGGCCTTGACGTTATCGATAGTGTCAGACGACTCAACCTCGAGAGTAATGGTC 8217 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || | || || || || |||||||| Sbjct 8216 TTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 8185 Score = 100 bits (110), Expect = 7e-16 Identities = 139/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || ||||| || || ||||| || || || | ||| ||||| | || || || ||||| Sbjct 8831 TCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGACCATCTTCCAACTGCTTACCTGCAAAG 8772 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || || | ||| || ||||| || || || || || ||||||||||| || || ||||| Sbjct 8771 ATAAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTG 8712 Query 104489 TCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTAC 104547 || | || || | ||| || || || | ||| || ||||| || || ||||| || || Sbjct 8711 TCAATCGTGTC-CGAGGACTCGACTTCCAATGTGATGGTCTTTCCTGTGAGTGTCTTGAC 8653 Query 104548 AAATATCTGCAT 104559 ||| || ||||| Sbjct 8652 AAAGATTTGCAT 8641 >seq62 Length=118391 Score = 111 bits (122), Expect = 4e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || ||||| || || || | || || || || || || ||| Sbjct 71442 GTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCATCCTCGAGCTGCTTACCA 71501 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || | ||| || ||||| || || || || |||||||||||||| || || Sbjct 71502 GCAAAGATAAGACGCTGCTGGTCAGGTGGGATACCCTCCTTATCCTGAATCTTGGCCTTG 71561 Query 104483 ACATTTTCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 || || || | ||| || | ||| || ||||| || || || ||||| || || || || Sbjct 71562 ACGTTGTCAATGGTGTC-CGAGGACTCAACCTCGAGGGTGATGGTCTTGCCGGTGAGGGT 71620 Query 104542 TTTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 71621 CTTGACAAAGATCTGCAT 71638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151208980570720