Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09-
20] 12,840 sequences; 23,769,677 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq62 111 1e-19
seq144 107 2e-18
seq33 96.9 3e-15
>seq62
Length=118391
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858
||||| || | || |||||||| || | ||| ||||| | |||| | || ||
Sbjct 71202 ACCAAATGAAGTGTGGATTCCTTCTGGATGTTGTAATCTGAAAGAGTGCGGCCGTCTTCG 71261
Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918
||||| || ||| | ||||| | | |||||||| ||||| || ||||| ||||| |
Sbjct 71262 AGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATCGGGAGGGATGCCTTCCTTGTCCTGG 71321
Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978
|| || ||||||||| | ||| ||||| | ||||| |||| |||||||| ||
Sbjct 71322 ATCTTGGCCTTGACGTTGTCGATGGTGTCCGAAGACTCGACTTCAAGAGTGATGGTCTTG 71381
Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
||||| | ||| || ||||||||||||||
Sbjct 71382 CCAGTCAAAGTCTTGACAAAGATCTGCAT 71410
Score = 84.2 bits (92), Expect = 2e-11
Identities = 141/204 (69%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 94804 GTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTG 94863
||| | ||| || ||||| || | ||| || || | ||| | |||||| |||||
Sbjct 71435 GTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCATCCTCGAGCTG 71494
Query 94864 TTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTT 94923
|| || ||||||| | | ||||| || || || ||||| || || || | ||| ||
Sbjct 71495 CTTACCAGCAAAGATAAGACGCTGCTGGTCAGGTGGGATACCCTCCTTATCCTGAATCTT 71554
Query 94924 TGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGT 94983
||||||||| | | | ||||| | | || || || | |||||||| || || ||
Sbjct 71555 GGCCTTGACGTTGTCAATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCGGT 71614
Query 94984 AAGAGTTTTCACAAAGATCTGCAT 95007
|| || || ||||||||||||||
Sbjct 71615 GAGGGTCTTGACAAAGATCTGCAT 71638
>seq144
Length=29207
Score = 107 bits (118), Expect = 2e-18
Identities = 152/212 (72%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCT 94856
||||||||||| || || ||||| || | ||| || || | || ||| | ||| |
Sbjct 8165 ACCAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCCG--AGAGGGTTCGGCCATCTT 8108
Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916
||| |||||| || | ||||| | | ||||| || ||||| ||||| || ||||| |
Sbjct 8107 CCAACTGTTTACCAGCGAAGATGAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCT 8048
Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976
|||||| ||||||||| | | | ||||| | || || || | |||||||| |
Sbjct 8047 GAATTTTGGCCTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCT 7988
Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008
| || || ||||| || |||||||||||||||
Sbjct 7987 TACCGGTCAGAGTCTTGACAAAGATCTGCATG 7956
Score = 100 bits (110), Expect = 3e-16
Identities = 139/193 (72%), Gaps = 4/193 (2%)
Strand=Plus/Minus
Query 94817 TCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA--TCCTCCAGCTGTTTTCCGCCAA 94874
|||||||| | ||| || ||| | |||||| | ||||| || || ||||| |||
Sbjct 8603 TCCTTTTGAATGTTGTAGTCGG--AGAGTGTTCGGCCGTCCTCAAGTTGCTTTCCAGCAA 8546
Query 94875 AGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGG 94934
|||| | | ||||||||| || ||||| ||||| ||||| | || || ||||| |||
Sbjct 8545 AGATGAGGCGTTGCTGATCAGGTGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGT 8486
Query 94935 CGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCA 94994
| ||| || |||| ||||| || | || ||||| || || ||||| ||||| |
Sbjct 8485 TGTCGATGGTATCAGAAGACTCGACCTCGAGAGTAATGGTCTTGCCTGTAAGGGTTTTGA 8426
Query 94995 CAAAGATCTGCAT 95007
| |||||||||||
Sbjct 8425 CGAAGATCTGCAT 8413
Score = 98.7 bits (108), Expect = 9e-16
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870
|| ||||| || || | ||| |||||| || ||| | ||||| ||||| ||||||
Sbjct 8381 GTCGATTCTTTCTGGATGTTGTAATCGGACAAGGTGCGGCCGTCCTCAAGCTGCTTTCCG 8322
Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930
| || || | | |||||||| |||||||| ||||| ||||| | ||| || ||||||
Sbjct 8321 GCGAAAATGAGACGCTGCTGATCGGGAGGAATGCCTTCCTTGTCCTGAATCTTGGCCTTG 8262
Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990
||| ||| |||||||| || || || | || ||||| || || || | ||
Sbjct 8261 ACGTTATCGATAGTGTCAGACGACTCAACCTCGAGAGTAATGGTCTTGCCGGTCAAGGTC 8202
Query 94991 TTCACAAAGATCTGCAT 95007
|| || |||||||||||
Sbjct 8201 TTGACGAAGATCTGCAT 8185
>seq33
Length=194022
Score = 96.9 bits (106), Expect = 3e-15
Identities = 115/156 (74%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911
||| || ||||| || ||| | ||||| | | |||||||| || ||||| ||||| ||
Sbjct 184270 ATCTTCGAGCTGCTTACCGGCGAAGATGAGACGCTGCTGATCAGGGGGAATGCCTTCCTT 184211
Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971
||| | || || ||||||||| | ||| ||||| | || || |||| |||||
Sbjct 184210 GTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCAAGGGTGAT 184151
Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
||| || || ||||| || || ||||||||||||||
Sbjct 184150 GGTCTTGCCCGTAAGGGTCTTAACAAAGATCTGCAT 184115
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448219249262400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |