Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09- 20] 12,840 sequences; 23,769,677 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq81 174 2e-38 seq69 104 3e-17 >seq81 Length=91273 Score = 174 bits (192), Expect = 2e-38 Identities = 591/918 (64%), Gaps = 2/918 (0%) Strand=Plus/Minus Query 62943 ATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTT 63002 || ||||| |||||||| || |||||||| || || | || | || || ||||| Sbjct 57129 ATGATCTCTGTGCAAAGGTTGGAGCACTTGATGGTACCGAGGTTCTTCTGGTTGCTCTTG 57070 Query 63003 TTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATA 63062 ||| || ||||| ||||| ||||| || ||||||| || |||| || || | Sbjct 57069 CGGTTGGCAGCGTCCTTGTAAAGGATGAAGGGGTTACCAGTCTCGGTCTGGGACTCGAGG 57010 Query 63063 ATCGCTTTCCAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCCTTTCTCTTTCGTA 63121 || || | ||||| | || ||||||| | | ||| | | | || ||||| Sbjct 57009 ATGGCGTACCAGA-GCTTCTGAGCCTTGACGGTGCGCTTGGAGCGACCCTCGGCCTCGTA 56951 Query 63122 TAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATC 63181 | || | || || ||||| || || | | | | || ||||| || | Sbjct 56950 GCGCTCGTAGAGACGCTCAAACTCCTCGCCGTAGCAGTCAGCGAGACCGGGACACTCGTT 56891 Query 63182 CGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAAT 63241 || ||||| | |||||| || |||| | || || | ||||| |||||||| |||| Sbjct 56890 AGGGCACATGAGCGACCAGTCACCGTTCTGCTCGACCCTCTTCATGAAGAGATCGGGAAC 56831 Query 63242 CCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAG 63301 ||| || || || || || | || | ||||| || || ||||| || Sbjct 56830 CCAGAGGGCGTAGAAGAGCTCACGGGCACGTACCTCCTCCTTACCGTGGTTCTTGCGGAG 56771 Query 63302 ATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGG 63361 || |||||| | | | ||| || ||||| || || | ||| ||||| | | || || Sbjct 56770 GTCAAGGAACTCGAAGACATCCGAGTGCCAAGGCTCAATGTAGATGGCAAAGGCACCGGG 56711 Query 63362 CCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 63421 || ||||| || ||||| || | ||||| || ||||| || | || | | ||| || Sbjct 56710 ACGCTTGTTACCACCCTGGTCAACGTATCGTGCAGTGTTGTTGAAGACACGGAGCATGGG 56651 Query 63422 AATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATT 63481 || |||||||| | |||||||||||||| || ||| ||| | | || || || Sbjct 56650 AACGATACCGTTGCTGACACCATTGGTACCGGCAATGTAGGAGCCAGTTCCTCGGATGTT 56591 Query 63482 ACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGT 63541 || ||||| || || || || | || ||||| | ||||| || | || Sbjct 56590 GTGGATGTTGAGACCGATACCACCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGGGT 56531 Query 63542 GTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTG 63601 ||| |||||||| || || ||||| ||||| | | || ||||| || | || Sbjct 56530 GTCGTAGATACCGTCGATCGAGTCATCCTTCATGGTGACAAGGAAACACGACGAGAGCTG 56471 Query 63602 GTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGA 63661 | | | ||| || || || || | ||| || |||||||| || || | || | || Sbjct 56470 GGGGTGGGGAGTACCAGCGTTGAAGAGGGTGGGGGAAGCGTGTGTGAAGAACTTCTGCGA 56411 Query 63662 AAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGAC 63721 | |||||||| ||||| || || || || ||| || || || || ||||| Sbjct 56410 CATGAGATTGTAGGTCTCGATGGCGCTTTCGATGTCCTCGCCGTGGATACCAACAGCGAC 56351 Query 63722 ACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGA 63781 |||||| | ||||||||| || | ||| | | |||| ||| || | | |||||| Sbjct 56350 ACGCATGAGCATGTGCTGGGGACGCTCAGCAACCTTGCCGTTAATACGGAGAAGGTAGGA 56291 Query 63782 TTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAAC 63841 | || | || || ||||| || ||||||| ||||| || |||||||| || | Sbjct 56290 TCGCTCGAGGGTCTTGAAACCGAAGAAGTTGTAGTGGAAGTCGCGCTCGTAAATGATTGC 56231 Query 63842 CGAGTTGAGTTTATCCTT 63859 ||||| ||| | |||||| Sbjct 56230 CGAGTCGAGCTGATCCTT 56213 >seq69 Length=107628 Score = 104 bits (114), Expect = 3e-17 Identities = 111/147 (76%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 33300 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGT 33359 ||| || || || ||| ||||| ||||| || | || || |||||||| || || Sbjct 12624 CAAGCAGGCAAAGTCGGTGTGCATGCCCTCATCACGCGAGATGAGCTCGTTGGAGAAAGT 12565 Query 33360 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAA 33419 ||| |||||||| || |||||||| || ||||| || ||||||||||| || || || || Sbjct 12564 GAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAACGAACCGGAGAA 12505 Query 33420 GAAGATTCCTTCTACTGCAGCAAAGGC 33446 |||||| ||||| || || || || || Sbjct 12504 GAAGATACCTTCGACGGCGGCGAAAGC 12478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622847216974400