Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09-
20] 12,840 sequences; 23,769,677 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq62 86.0 6e-12
seq69 84.2 2e-11
>seq62
Length=118391
Score = 86.0 bits (94), Expect = 6e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | ||||| || || || ||||| || | ||||| | ||| | || ||
Sbjct 71410 ATGCAGATCTTTGTCAAGACTTTGACTGGCAAGACCATCACTCTTGAAGTCGAGTCTTCG 71351
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||||||||| | ||||| ||||| ||||| ||||| || |||||||||||
Sbjct 71350 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATCCCTCCCGATCAG 71291
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| | ||||| | || |||||| || |||||||| | | | | || || |||
Sbjct 71290 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAAGACGGCCGCACTCTTTCAGATTACAAC 71231
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
|| || || ||||| || | ||| |||||||
Sbjct 71230 ATCCAGAAGGAATCCACACTTCATTTGGTCCT 71199
>seq69
Length=107628
Score = 84.2 bits (92), Expect = 2e-11
Identities = 127/179 (71%), Gaps = 4/179 (2%)
Strand=Plus/Minus
Query 120325 GCTCGATGATGTTAGTGTTCACGATGACGTCGGCGGCAGCGAAAAACGCGAGAACGTGCT 120384
|||||| || || ||| ||||| |||||| || ||||| || || || |||||
Sbjct 12241 GCTCGACGAGATTCTCGTTAACGATACCGTCGGAAGCGGCGAAGAAGGCAAGGACGTGAG 12182
Query 120385 TAAGAAAAAAT--CGTTCTTTATCGTTCAGTTTTTTGTTCCAATCGTCAAAGTCCTTGGA 120442
||| || | || || || ||||| || || |||| |||||||| || ||||||||
Sbjct 12181 --AGATGAAGTGACGCTCGTTGTCGTTGAGCTTGTTGTCCCAATCGTGAAGATCCTTGGA 12124
Query 120443 CATGTCGATCTCTTCGACTTTCCAGTGACAATCGACCGCTTTCTTGTACGATTGCCAGA 120501
| ||||||||||||| | ||||| | | | || ||||||||| ||||||||
Sbjct 12123 AAGGTCGATCTCTTCGGCGGTCCAGAAGGAGGCTTCGGCCTTCTTGTACATTTGCCAGA 12065
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478585574684800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |