Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09- 20] 12,840 sequences; 23,769,677 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq62 86.0 6e-12 seq69 84.2 2e-11 >seq62 Length=118391 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| || || || ||||| || | ||||| | ||| | || || Sbjct 71410 ATGCAGATCTTTGTCAAGACTTTGACTGGCAAGACCATCACTCTTGAAGTCGAGTCTTCG 71351 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | ||||| ||||| ||||| ||||| || ||||||||||| Sbjct 71350 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATCCCTCCCGATCAG 71291 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || | ||||| | || |||||| || |||||||| | | | | || || ||| Sbjct 71290 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAAGACGGCCGCACTCTTTCAGATTACAAC 71231 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || || || ||||| || | ||| ||||||| Sbjct 71230 ATCCAGAAGGAATCCACACTTCATTTGGTCCT 71199 >seq69 Length=107628 Score = 84.2 bits (92), Expect = 2e-11 Identities = 127/179 (71%), Gaps = 4/179 (2%) Strand=Plus/Minus Query 120325 GCTCGATGATGTTAGTGTTCACGATGACGTCGGCGGCAGCGAAAAACGCGAGAACGTGCT 120384 |||||| || || ||| ||||| |||||| || ||||| || || || ||||| Sbjct 12241 GCTCGACGAGATTCTCGTTAACGATACCGTCGGAAGCGGCGAAGAAGGCAAGGACGTGAG 12182 Query 120385 TAAGAAAAAAT--CGTTCTTTATCGTTCAGTTTTTTGTTCCAATCGTCAAAGTCCTTGGA 120442 ||| || | || || || ||||| || || |||| |||||||| || |||||||| Sbjct 12181 --AGATGAAGTGACGCTCGTTGTCGTTGAGCTTGTTGTCCCAATCGTGAAGATCCTTGGA 12124 Query 120443 CATGTCGATCTCTTCGACTTTCCAGTGACAATCGACCGCTTTCTTGTACGATTGCCAGA 120501 | ||||||||||||| | ||||| | | | || ||||||||| |||||||| Sbjct 12123 AAGGTCGATCTCTTCGGCGGTCCAGAAGGAGGCTTCGGCCTTCTTGTACATTTGCCAGA 12065 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478585574684800