Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09- 20] 12,840 sequences; 23,769,677 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq144 125 7e-24 seq69 111 1e-19 seq62 107 2e-18 seq24 102 8e-17 seq33 98.7 9e-16 seq81 91.5 1e-13 >seq144 Length=29207 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | ||| | |||||| || || || |||||||||||| | Sbjct 8411 CCACCACGAAGACGGAGAACGAGATGGAGGGTCGATTCTTTCTGGATGTTGTAATCGGAC 8352 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| |||||||| || ||| | || | ||||||||| || ||||| Sbjct 8351 AAGGTGCGGCCGTCCTCAAGCTGCTTTCCGGCGAAAATGAGACGCTGCTGATCGGGAGGA 8292 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| || || ||||| | || | ||| || | ||||| | Sbjct 8291 ATGCCTTCCTTGTCCTGAATCTTGGCCTTGACGTTATCGATAGTGTCAGACGACTCAACC 8232 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| |||| ||| || ||||| | || || ||||| |||||||| Sbjct 8231 TCGAGAGTAATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 8185 Score = 122 bits (134), Expect = 8e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || || || | ||| |||||||| || |||||||| || Sbjct 8183 CCACCACGGAGACGGAGGACCAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCCGAG 8124 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || || || | ||| || || ||| |||| | |||||||||||| |||||| Sbjct 8123 AGGGTTCGGCCATCTTCCAACTGTTTACCAGCGAAGATGAGACGCTGCTGGTCGGGAGGG 8064 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||||| ||||| | || | || |||| ||||| | Sbjct 8063 ATACCCTCCTTGTCCTGAATTTTGGCCTTGACGTTGTCAATGGTGTCGGAAGACTCCACC 8004 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGAC 131237 |||| ||| | ||| |||||||| ||||| || || || ||||||||||| Sbjct 8003 TCGAGGGTGATGGTCTTACCGGTCAGAGTCTTGACAAAGATCTGCATGAC 7954 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 131043 CTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTA 131102 |||||||||||||||||| ||| | || || |||||| || ||||| || || | Sbjct 8604 CTCCTTTTGAATGTTGTAGTCGGAGAGTGTTCGGCCGTCCTCAAGTTGCTTTCCAGCAAA 8545 Query 131103 GATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTG 131162 ||| | || ||||| || || || || ||||| ||||| ||| || ||| | | Sbjct 8544 GATGAGGCGTTGCTGATCAGGTGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTT 8485 Query 131163 CTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTAC 131222 || | ||||| | ||||||| |||| |||| ||| || || || || ||||| || Sbjct 8484 GTCGATGGTATCAGAAGACTCGACCTCGAGAGTAATGGTCTTGCCTGTAAGGGTTTTGAC 8425 Query 131223 GAAAATCTGCAT 131234 ||| |||||||| Sbjct 8424 GAAGATCTGCAT 8413 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || ||||||||||| ||||| | || | || |||||| || |||||||| || Sbjct 8867 CCTCCGCGCAAACGAAGCACAAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGAA 8808 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| || || | |||||| ||||| |||| | |||||||||||| || ||| Sbjct 8807 AGGGTGCGACCATCTTCCAACTGCTTACCTGCAAAGATAAGACGCTGCTGGTCAGGGGGG 8748 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || || ||||| | || | || || | |||||||| Sbjct 8747 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACT 8688 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || || || || || || || || || ||||| Sbjct 8687 TCCAATGTGATGGTCTTTCCTGTGAGTGTCTTGACAAAGATTTGCAT 8641 >seq69 Length=107628 Score = 111 bits (122), Expect = 1e-19 Identities = 244/358 (68%), Gaps = 11/358 (3%) Strand=Plus/Plus Query 46140 CGCGACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGG 46199 ||| ||||| ||||| ||| | || || || || || || || |||| || || || Sbjct 12453 CGCCACTTTTGCCGAACGTCTCGTCGCTTTCGCCGCCGTCGAAGGTATCTTCTTCTCCGG 12512 Query 46200 CAGTTTTGCCGCCATCTTTTACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTA 46258 || || ||||||| | |||| || | || | |||||||||| || || || Sbjct 12513 TTCGTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGTC-TCATGCCCGGTCTCACTTTCT 12571 Query 46259 GCAACGAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATA 46318 ||||||||| || ||||| || |||||| |||| || |||||||| || || | || | Sbjct 12572 CCAACGAGCTCATCTCGCGTGATGAGGGCATGCACACCGACTTTGCCTG-CT-TGCTCTT 12629 Query 46319 ACACTCGCGTGCACGACAAGCT---TGCGCCCGACACCGTGCTGAGCATGTTCAAGGAGG 46375 ||||| | | | | |||| ||| ||||| ||||| || | || | |||| Sbjct 12630 ---CTCGCAT-CTCAAGAAGCGCGCTGCTCCCGAGACCGTTCTCAAGATTATTTCCGAGG 12685 Query 46376 CGGTGGCCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGA 46435 | || | || |||||| || || || | ||| |||||| | | || | ||||||| Sbjct 12686 CTGTAGAGATCGAGAAGAGCTTCTTGACCGATGCATTGCCCGTTTCGCTCATTGGCATGA 12745 Query 46436 ACGCACAGTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCT 46493 |||| || |||||| |||||| |||| || || |||||| ||||| |||||| Sbjct 12746 ACGCCAAGCTCATGTGCACCTACATTGAGTACGTGGCCGACCGATTGCTCACGCAGCT 12803 >seq62 Length=118391 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || ||||| | || || ||||| || ||||||||||| Sbjct 71184 CCACCACGGAGACGGAGGACCAAATGAAGTGTGGATTCCTTCTGGATGTTGTAATCTGAA 71243 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||| || ||||||||||| ||| |||| | |||||||| || |||||| Sbjct 71244 AGAGTGCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATCGGGAGGG 71303 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| || ||||| | || | || || | ||||||| Sbjct 71304 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAAGACTCGACT 71363 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || || || | ||| || || || |||||||| Sbjct 71364 TCAAGAGTGATGGTCTTGCCAGTCAAAGTCTTGACAAAGATCTGCAT 71410 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | ||| || || | || | || |||||||| || |||||||| || Sbjct 71412 CCACCGCGGAGACGGAGGACGAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAG 71471 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| |||||||| || || |||| | |||||||||||| || ||| Sbjct 71472 AGGGTGCGGCCATCCTCGAGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCAGGTGGG 71531 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || || || || || ||||| | || | || || | |||||| | Sbjct 71532 ATACCCTCCTTATCCTGAATCTTGGCCTTGACGTTGTCAATGGTGTCCGAGGACTCAACC 71591 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | ||| || ||||| || || || || || |||||||| Sbjct 71592 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 71638 >seq24 Length=214592 Score = 102 bits (112), Expect = 8e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | || | |||||||||||| || |||||||| || Sbjct 73368 CCACCACGGAGACGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 73427 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| |||||||| || ||| |||| | |||||||||||| || ||| Sbjct 73428 AGGGTGCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATGAGACGCTGCTGGTCGGGGGGG 73487 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||| | | || | || |||| ||||| | Sbjct 73488 ATACCCTCCTTGTCCTGGATCTTGGCCTTAACGTTGTCGATGGTGTCGGAAGACTCCACC 73547 Query 131188 TCGACGGTAACGGTTTTACCGGTT 131211 || | ||| | ||| ||||| ||| Sbjct 73548 TCAAGGGTGATGGTCTTACCTGTT 73571 >seq33 Length=194022 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || ||||| | || | |||||||||||| || |||||||| || Sbjct 184341 CCACCACGGAGGCGGAGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 184282 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| || || |||||||| || ||| |||| | ||||||||| || || || Sbjct 184281 AGGGTGCGTCCATCTTCGAGCTGCTTACCGGCGAAGATGAGACGCTGCTGATCAGGGGGA 184222 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| || ||||| | || | || || | ||||| | Sbjct 184221 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACC 184162 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || || || || || || || || |||||||| Sbjct 184161 TCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTAACAAAGATCTGCAT 184115 >seq81 Length=91273 Score = 91.5 bits (100), Expect = 1e-13 Identities = 349/543 (64%), Gaps = 20/543 (4%) Strand=Plus/Minus Query 144740 GCTGGCTTGGTGCGCAAATAGTACATGCCCGTTTTGAGTCCCGAGCGCCAAGTGTAGTCG 144799 ||||||||||| ||||| ||||| | || || ||||| ||| |||| |||| | Sbjct 58065 GCTGGCTTGGTACGCAAGTAGTAGGTACCGGTCTTGAGACCCTTCTTCCAACCGTAGAAG 58006 Query 144800 TGTATCGACGTCATCAGAGCGTACGTGGGCTCCGCCACAAACAAATTTAGCGATTGGCTT 144859 || ||||| || | | || || | || || ||| || | || ||||| || Sbjct 58005 TGCATCGAAGTGAGCTGACCGAAAGTAGGTGCCGACAAGTGGATGTTGAGCGACTGCGAC 57946 Query 144860 TGATCAATGAAAGCGTTGCGGTCGGCGGCCATCTCAATCATACGTTTGCATTTCATTTCC 144919 || |||||||| |||||||| ||||| || || ||| || | || ||| Sbjct 57945 TGGCAGATGAAAGCACCACGGTCGGCCGCCATGTCGATGATAGCCTTCTGACTGATCTCC 57886 Query 144920 CAAGCGGTCTTGTACAAACGTTTAATGTGGTCCGGAATGCCGTCAATCGCCTGAATCGAC 144979 ||| |||||||||| | || || |||| || || ||| || ||||||||| Sbjct 57885 CAAACGGTCTTGTAGAGCTTCTTGATACGGTCAGGGATACCGGGAACGTTCTGAATCGAA 57826 Query 144980 CCCTTGTGCGCAAATATGGCGTTCCGCATTTCGGACGTGTACAGTTTTAA----CTTGAT 145035 || ||| || | || |||| ||| |||| ||| || |||| | Sbjct 57825 CCACCGTGAGCGATGATACGGTTCTTCATG------GTGTC--GTTCCAAAGACCTTGCT 57774 Query 145036 CAAGTCG-TCA---ATTAAGTACTGATTGACGACCTGAAACTCGCCGGCCAACACACGAC 145091 ||| | ||| | || | | ||||||||||| ||||| || || | ||||| | Sbjct 57773 CAACGAGCTCACGGAGCAACCAAGGGTTGACGACCTGGAACTCACCAGCGAGTACACGGC 57714 Query 145092 GCAAATACACGTTAGACGTGAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGG 145151 || | || | ||| || ||| | || || || ||||||| ||| || || ||| || Sbjct 57713 GCGAGTAGATGTTCGAGGTGTAAGGCTCGAAGCACTCGTTGAAGCCGAGAATCTGACTGG 57654 Query 145152 TCGTTGCGGTGGGCATGTACGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGT 145211 ||| || || |||||| || | ||| | || ||||| || |||||||| || | Sbjct 57653 TCGAGGCAGTAGGCATGGGAGCGAGCAAGAGCGAGTTGCGAAGACCGTGCTTGGCAATCT 57594 Query 145212 CTTCCTTTAGCGTACCCCAATCCCATAG--CGAAGTCGGCCTCACGTCCCACATGTCGTA 145269 |||| || | |||| ||||| || || || || | || ||||||||||||| Sbjct 57593 TGGCCTTGAGGCTGGCCCAGTCCCAGAGGTCGGAG--GGTGTAACACCCCACATGTCGTA 57536 Query 145270 CTG 145272 ||| Sbjct 57535 CTG 57533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471937041945600