Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09-
20] 12,840 sequences; 23,769,677 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq144 125 7e-24
seq69 111 1e-19
seq62 107 2e-18
seq24 102 8e-17
seq33 98.7 9e-16
seq81 91.5 1e-13
>seq144
Length=29207
Score = 125 bits (138), Expect = 7e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| || || | ||| | |||||| || || || |||||||||||| |
Sbjct 8411 CCACCACGAAGACGGAGAACGAGATGGAGGGTCGATTCTTTCTGGATGTTGTAATCGGAC 8352
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| |||||| |||||||| || ||| | || | ||||||||| || |||||
Sbjct 8351 AAGGTGCGGCCGTCCTCAAGCTGCTTTCCGGCGAAAATGAGACGCTGCTGATCGGGAGGA 8292
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| ||||| || || ||||| | || | ||| || | ||||| |
Sbjct 8291 ATGCCTTCCTTGTCCTGAATCTTGGCCTTGACGTTATCGATAGTGTCAGACGACTCAACC 8232
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| |||| ||| || ||||| | || || ||||| ||||||||
Sbjct 8231 TCGAGAGTAATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 8185
Score = 122 bits (134), Expect = 8e-23
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| || || || || | ||| |||||||| || |||||||| ||
Sbjct 8183 CCACCACGGAGACGGAGGACCAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCCGAG 8124
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||| || || || | ||| || || ||| |||| | |||||||||||| ||||||
Sbjct 8123 AGGGTTCGGCCATCTTCCAACTGTTTACCAGCGAAGATGAGACGCTGCTGGTCGGGAGGG 8064
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||||| ||||| | || | || |||| ||||| |
Sbjct 8063 ATACCCTCCTTGTCCTGAATTTTGGCCTTGACGTTGTCAATGGTGTCGGAAGACTCCACC 8004
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGAC 131237
|||| ||| | ||| |||||||| ||||| || || || |||||||||||
Sbjct 8003 TCGAGGGTGATGGTCTTACCGGTCAGAGTCTTGACAAAGATCTGCATGAC 7954
Score = 95.1 bits (104), Expect = 1e-14
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 131043 CTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTA 131102
|||||||||||||||||| ||| | || || |||||| || ||||| || || |
Sbjct 8604 CTCCTTTTGAATGTTGTAGTCGGAGAGTGTTCGGCCGTCCTCAAGTTGCTTTCCAGCAAA 8545
Query 131103 GATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTG 131162
||| | || ||||| || || || || ||||| ||||| ||| || ||| | |
Sbjct 8544 GATGAGGCGTTGCTGATCAGGTGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTT 8485
Query 131163 CTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTAC 131222
|| | ||||| | ||||||| |||| |||| ||| || || || || ||||| ||
Sbjct 8484 GTCGATGGTATCAGAAGACTCGACCTCGAGAGTAATGGTCTTGCCTGTAAGGGTTTTGAC 8425
Query 131223 GAAAATCTGCAT 131234
||| ||||||||
Sbjct 8424 GAAGATCTGCAT 8413
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| ||||||||||| ||||| | || | || |||||| || |||||||| ||
Sbjct 8867 CCTCCGCGCAAACGAAGCACAAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGAA 8808
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| || || | |||||| ||||| |||| | |||||||||||| || |||
Sbjct 8807 AGGGTGCGACCATCTTCCAACTGCTTACCTGCAAAGATAAGACGCTGCTGGTCAGGGGGG 8748
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| || || ||||| | || | || || | ||||||||
Sbjct 8747 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACT 8688
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | ||| || || || || || || || || || |||||
Sbjct 8687 TCCAATGTGATGGTCTTTCCTGTGAGTGTCTTGACAAAGATTTGCAT 8641
>seq69
Length=107628
Score = 111 bits (122), Expect = 1e-19
Identities = 244/358 (68%), Gaps = 11/358 (3%)
Strand=Plus/Plus
Query 46140 CGCGACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGG 46199
||| ||||| ||||| ||| | || || || || || || || |||| || || ||
Sbjct 12453 CGCCACTTTTGCCGAACGTCTCGTCGCTTTCGCCGCCGTCGAAGGTATCTTCTTCTCCGG 12512
Query 46200 CAGTTTTGCCGCCATCTTTTACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTA 46258
|| || ||||||| | |||| || | || | |||||||||| || || ||
Sbjct 12513 TTCGTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGTC-TCATGCCCGGTCTCACTTTCT 12571
Query 46259 GCAACGAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATA 46318
||||||||| || ||||| || |||||| |||| || |||||||| || || | || |
Sbjct 12572 CCAACGAGCTCATCTCGCGTGATGAGGGCATGCACACCGACTTTGCCTG-CT-TGCTCTT 12629
Query 46319 ACACTCGCGTGCACGACAAGCT---TGCGCCCGACACCGTGCTGAGCATGTTCAAGGAGG 46375
||||| | | | | |||| ||| ||||| ||||| || | || | ||||
Sbjct 12630 ---CTCGCAT-CTCAAGAAGCGCGCTGCTCCCGAGACCGTTCTCAAGATTATTTCCGAGG 12685
Query 46376 CGGTGGCCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGA 46435
| || | || |||||| || || || | ||| |||||| | | || | |||||||
Sbjct 12686 CTGTAGAGATCGAGAAGAGCTTCTTGACCGATGCATTGCCCGTTTCGCTCATTGGCATGA 12745
Query 46436 ACGCACAGTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCT 46493
|||| || |||||| |||||| |||| || || |||||| ||||| ||||||
Sbjct 12746 ACGCCAAGCTCATGTGCACCTACATTGAGTACGTGGCCGACCGATTGCTCACGCAGCT 12803
>seq62
Length=118391
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| || || ||||| | || || ||||| || |||||||||||
Sbjct 71184 CCACCACGGAGACGGAGGACCAAATGAAGTGTGGATTCCTTCTGGATGTTGTAATCTGAA 71243
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| ||| || ||||||||||| ||| |||| | |||||||| || ||||||
Sbjct 71244 AGAGTGCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATCGGGAGGG 71303
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| ||||| ||| || ||||| | || | || || | |||||||
Sbjct 71304 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAAGACTCGACT 71363
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | ||| || || || | ||| || || || ||||||||
Sbjct 71364 TCAAGAGTGATGGTCTTGCCAGTCAAAGTCTTGACAAAGATCTGCAT 71410
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|||||||| | ||| || || | || | || |||||||| || |||||||| ||
Sbjct 71412 CCACCGCGGAGACGGAGGACGAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAG 71471
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| ||||| |||||||| || || |||| | |||||||||||| || |||
Sbjct 71472 AGGGTGCGGCCATCCTCGAGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCAGGTGGG 71531
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || || || || || ||||| | || | || || | |||||| |
Sbjct 71532 ATACCCTCCTTATCCTGAATCTTGGCCTTGACGTTGTCAATGGTGTCCGAGGACTCAACC 71591
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| ||| | ||| || ||||| || || || || || ||||||||
Sbjct 71592 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 71638
>seq24
Length=214592
Score = 102 bits (112), Expect = 8e-17
Identities = 145/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| || || | || | |||||||||||| || |||||||| ||
Sbjct 73368 CCACCACGGAGACGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 73427
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| |||||| |||||||| || ||| |||| | |||||||||||| || |||
Sbjct 73428 AGGGTGCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATGAGACGCTGCTGGTCGGGGGGG 73487
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||| | | || | || |||| ||||| |
Sbjct 73488 ATACCCTCCTTGTCCTGGATCTTGGCCTTAACGTTGTCGATGGTGTCGGAAGACTCCACC 73547
Query 131188 TCGACGGTAACGGTTTTACCGGTT 131211
|| | ||| | ||| ||||| |||
Sbjct 73548 TCAAGGGTGATGGTCTTACCTGTT 73571
>seq33
Length=194022
Score = 98.7 bits (108), Expect = 9e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | || ||||| | || | |||||||||||| || |||||||| ||
Sbjct 184341 CCACCACGGAGGCGGAGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 184282
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| || || |||||||| || ||| |||| | ||||||||| || || ||
Sbjct 184281 AGGGTGCGTCCATCTTCGAGCTGCTTACCGGCGAAGATGAGACGCTGCTGATCAGGGGGA 184222
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| ||||| ||| || ||||| | || | || || | ||||| |
Sbjct 184221 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACC 184162
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | ||| || || || || || || || || ||||||||
Sbjct 184161 TCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTAACAAAGATCTGCAT 184115
>seq81
Length=91273
Score = 91.5 bits (100), Expect = 1e-13
Identities = 349/543 (64%), Gaps = 20/543 (4%)
Strand=Plus/Minus
Query 144740 GCTGGCTTGGTGCGCAAATAGTACATGCCCGTTTTGAGTCCCGAGCGCCAAGTGTAGTCG 144799
||||||||||| ||||| ||||| | || || ||||| ||| |||| |||| |
Sbjct 58065 GCTGGCTTGGTACGCAAGTAGTAGGTACCGGTCTTGAGACCCTTCTTCCAACCGTAGAAG 58006
Query 144800 TGTATCGACGTCATCAGAGCGTACGTGGGCTCCGCCACAAACAAATTTAGCGATTGGCTT 144859
|| ||||| || | | || || | || || ||| || | || ||||| ||
Sbjct 58005 TGCATCGAAGTGAGCTGACCGAAAGTAGGTGCCGACAAGTGGATGTTGAGCGACTGCGAC 57946
Query 144860 TGATCAATGAAAGCGTTGCGGTCGGCGGCCATCTCAATCATACGTTTGCATTTCATTTCC 144919
|| |||||||| |||||||| ||||| || || ||| || | || |||
Sbjct 57945 TGGCAGATGAAAGCACCACGGTCGGCCGCCATGTCGATGATAGCCTTCTGACTGATCTCC 57886
Query 144920 CAAGCGGTCTTGTACAAACGTTTAATGTGGTCCGGAATGCCGTCAATCGCCTGAATCGAC 144979
||| |||||||||| | || || |||| || || ||| || |||||||||
Sbjct 57885 CAAACGGTCTTGTAGAGCTTCTTGATACGGTCAGGGATACCGGGAACGTTCTGAATCGAA 57826
Query 144980 CCCTTGTGCGCAAATATGGCGTTCCGCATTTCGGACGTGTACAGTTTTAA----CTTGAT 145035
|| ||| || | || |||| ||| |||| ||| || |||| |
Sbjct 57825 CCACCGTGAGCGATGATACGGTTCTTCATG------GTGTC--GTTCCAAAGACCTTGCT 57774
Query 145036 CAAGTCG-TCA---ATTAAGTACTGATTGACGACCTGAAACTCGCCGGCCAACACACGAC 145091
||| | ||| | || | | ||||||||||| ||||| || || | ||||| |
Sbjct 57773 CAACGAGCTCACGGAGCAACCAAGGGTTGACGACCTGGAACTCACCAGCGAGTACACGGC 57714
Query 145092 GCAAATACACGTTAGACGTGAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGG 145151
|| | || | ||| || ||| | || || || ||||||| ||| || || ||| ||
Sbjct 57713 GCGAGTAGATGTTCGAGGTGTAAGGCTCGAAGCACTCGTTGAAGCCGAGAATCTGACTGG 57654
Query 145152 TCGTTGCGGTGGGCATGTACGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGT 145211
||| || || |||||| || | ||| | || ||||| || |||||||| || |
Sbjct 57653 TCGAGGCAGTAGGCATGGGAGCGAGCAAGAGCGAGTTGCGAAGACCGTGCTTGGCAATCT 57594
Query 145212 CTTCCTTTAGCGTACCCCAATCCCATAG--CGAAGTCGGCCTCACGTCCCACATGTCGTA 145269
|||| || | |||| ||||| || || || || | || |||||||||||||
Sbjct 57593 TGGCCTTGAGGCTGGCCCAGTCCCAGAGGTCGGAG--GGTGTAACACCCCACATGTCGTA 57536
Query 145270 CTG 145272
|||
Sbjct 57535 CTG 57533
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 471937041945600
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