Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09- 20] 12,840 sequences; 23,769,677 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq81 161 1e-34 >seq81 Length=91273 Score = 161 bits (178), Expect = 1e-34 Identities = 588/918 (64%), Gaps = 2/918 (0%) Strand=Plus/Minus Query 62798 ATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTT 62857 || ||||| |||||||| || ||||||||||| || | || | || || ||||| Sbjct 57129 ATGATCTCTGTGCAAAGGTTGGAGCACTTGATGGTACCGAGGTTCTTCTGGTTGCTCTTG 57070 Query 62858 TTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATA 62917 ||| || ||||| ||||| ||||| || ||||||| || |||| || || | Sbjct 57069 CGGTTGGCAGCGTCCTTGTAAAGGATGAAGGGGTTACCAGTCTCGGTCTGGGACTCGAGG 57010 Query 62918 ATCGCTTTCCAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCTTTTCTCTTTCGTA 62976 || || | ||||| | || ||||||| | | ||| | | || ||||| Sbjct 57009 ATGGCGTACCAGA-GCTTCTGAGCCTTGACGGTGCGCTTGGAGCGACCCTCGGCCTCGTA 56951 Query 62977 TAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATC 63036 | || | || || ||||| || || | | | || || ||||| || | Sbjct 56950 GCGCTCGTAGAGACGCTCAAACTCCTCGCCGTAGCAGTCAGCGAGACCGGGACACTCGTT 56891 Query 63037 CGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAAT 63096 || ||||| | |||||| || |||| | || || | ||||| |||||||| |||| Sbjct 56890 AGGGCACATGAGCGACCAGTCACCGTTCTGCTCGACCCTCTTCATGAAGAGATCGGGAAC 56831 Query 63097 CCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAG 63156 ||| || || || || || | || | ||||| || || ||||| || Sbjct 56830 CCAGAGGGCGTAGAAGAGCTCACGGGCACGTACCTCCTCCTTACCGTGGTTCTTGCGGAG 56771 Query 63157 ATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGG 63216 || |||||| | | | ||| || ||||| || || | ||| ||||| | | || || Sbjct 56770 GTCAAGGAACTCGAAGACATCCGAGTGCCAAGGCTCAATGTAGATGGCAAAGGCACCGGG 56711 Query 63217 CCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 63276 || ||||| || ||||| || | ||||| || ||||| || | || | | ||| || Sbjct 56710 ACGCTTGTTACCACCCTGGTCAACGTATCGTGCAGTGTTGTTGAAGACACGGAGCATGGG 56651 Query 63277 AATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATT 63336 || ||||| ||| ||||||||| || | || ||| ||| | | || || || Sbjct 56650 AACGATACCGTTGCTGACACCATTGGTACCGGCAATGTAGGAGCCAGTTCCTCGGATGTT 56591 Query 63337 ACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGT 63396 || ||||| || || || || | || ||||| | ||||| || | || Sbjct 56590 GTGGATGTTGAGACCGATACCACCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGGGT 56531 Query 63397 ATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTG 63456 || ||||| || || || |||||| ||||| | | || ||||| || | || Sbjct 56530 GTCGTAGATACCGTCGATCGAGTCATCCTTCATGGTGACAAGGAAACACGACGAGAGCTG 56471 Query 63457 GTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGA 63516 | | | ||| || || || || | ||| || |||||||| || || | || | || Sbjct 56470 GGGGTGGGGAGTACCAGCGTTGAAGAGGGTGGGGGAAGCGTGTGTGAAGAACTTCTGCGA 56411 Query 63517 AAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGAC 63576 | |||||||| ||||| || || || || ||| || || || || ||||| Sbjct 56410 CATGAGATTGTAGGTCTCGATGGCGCTTTCGATGTCCTCGCCGTGGATACCAACAGCGAC 56351 Query 63577 ACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGA 63636 |||||| | ||||||||| || | ||| | | |||| ||| || | | |||||| Sbjct 56350 ACGCATGAGCATGTGCTGGGGACGCTCAGCAACCTTGCCGTTAATACGGAGAAGGTAGGA 56291 Query 63637 TTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAAC 63696 | || | || || ||||| || ||||||| ||||| || |||||||| || | Sbjct 56290 TCGCTCGAGGGTCTTGAAACCGAAGAAGTTGTAGTGGAAGTCGCGCTCGTAAATGATTGC 56231 Query 63697 CGAGTTGAGTTTATCCTT 63714 ||||| ||| | |||||| Sbjct 56230 CGAGTCGAGCTGATCCTT 56213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633530302064000