Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09-
20] 12,840 sequences; 23,769,677 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq81 161 1e-34
>seq81
Length=91273
Score = 161 bits (178), Expect = 1e-34
Identities = 588/918 (64%), Gaps = 2/918 (0%)
Strand=Plus/Minus
Query 62798 ATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTT 62857
|| ||||| |||||||| || ||||||||||| || | || | || || |||||
Sbjct 57129 ATGATCTCTGTGCAAAGGTTGGAGCACTTGATGGTACCGAGGTTCTTCTGGTTGCTCTTG 57070
Query 62858 TTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATA 62917
||| || ||||| ||||| ||||| || ||||||| || |||| || || |
Sbjct 57069 CGGTTGGCAGCGTCCTTGTAAAGGATGAAGGGGTTACCAGTCTCGGTCTGGGACTCGAGG 57010
Query 62918 ATCGCTTTCCAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCTTTTCTCTTTCGTA 62976
|| || | ||||| | || ||||||| | | ||| | | || |||||
Sbjct 57009 ATGGCGTACCAGA-GCTTCTGAGCCTTGACGGTGCGCTTGGAGCGACCCTCGGCCTCGTA 56951
Query 62977 TAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATC 63036
| || | || || ||||| || || | | | || || ||||| || |
Sbjct 56950 GCGCTCGTAGAGACGCTCAAACTCCTCGCCGTAGCAGTCAGCGAGACCGGGACACTCGTT 56891
Query 63037 CGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAAT 63096
|| ||||| | |||||| || |||| | || || | ||||| |||||||| ||||
Sbjct 56890 AGGGCACATGAGCGACCAGTCACCGTTCTGCTCGACCCTCTTCATGAAGAGATCGGGAAC 56831
Query 63097 CCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAG 63156
||| || || || || || | || | ||||| || || ||||| ||
Sbjct 56830 CCAGAGGGCGTAGAAGAGCTCACGGGCACGTACCTCCTCCTTACCGTGGTTCTTGCGGAG 56771
Query 63157 ATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGG 63216
|| |||||| | | | ||| || ||||| || || | ||| ||||| | | || ||
Sbjct 56770 GTCAAGGAACTCGAAGACATCCGAGTGCCAAGGCTCAATGTAGATGGCAAAGGCACCGGG 56711
Query 63217 CCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 63276
|| ||||| || ||||| || | ||||| || ||||| || | || | | ||| ||
Sbjct 56710 ACGCTTGTTACCACCCTGGTCAACGTATCGTGCAGTGTTGTTGAAGACACGGAGCATGGG 56651
Query 63277 AATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATT 63336
|| ||||| ||| ||||||||| || | || ||| ||| | | || || ||
Sbjct 56650 AACGATACCGTTGCTGACACCATTGGTACCGGCAATGTAGGAGCCAGTTCCTCGGATGTT 56591
Query 63337 ACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGT 63396
|| ||||| || || || || | || ||||| | ||||| || | ||
Sbjct 56590 GTGGATGTTGAGACCGATACCACCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGGGT 56531
Query 63397 ATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTG 63456
|| ||||| || || || |||||| ||||| | | || ||||| || | ||
Sbjct 56530 GTCGTAGATACCGTCGATCGAGTCATCCTTCATGGTGACAAGGAAACACGACGAGAGCTG 56471
Query 63457 GTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGA 63516
| | | ||| || || || || | ||| || |||||||| || || | || | ||
Sbjct 56470 GGGGTGGGGAGTACCAGCGTTGAAGAGGGTGGGGGAAGCGTGTGTGAAGAACTTCTGCGA 56411
Query 63517 AAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGAC 63576
| |||||||| ||||| || || || || ||| || || || || |||||
Sbjct 56410 CATGAGATTGTAGGTCTCGATGGCGCTTTCGATGTCCTCGCCGTGGATACCAACAGCGAC 56351
Query 63577 ACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGA 63636
|||||| | ||||||||| || | ||| | | |||| ||| || | | ||||||
Sbjct 56350 ACGCATGAGCATGTGCTGGGGACGCTCAGCAACCTTGCCGTTAATACGGAGAAGGTAGGA 56291
Query 63637 TTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAAC 63696
| || | || || ||||| || ||||||| ||||| || |||||||| || |
Sbjct 56290 TCGCTCGAGGGTCTTGAAACCGAAGAAGTTGTAGTGGAAGTCGCGCTCGTAAATGATTGC 56231
Query 63697 CGAGTTGAGTTTATCCTT 63714
||||| ||| | ||||||
Sbjct 56230 CGAGTCGAGCTGATCCTT 56213
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633530302064000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |