Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09- 20] 12,840 sequences; 23,769,677 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq144 123 2e-23 seq62 116 3e-21 >seq144 Length=29207 Score = 123 bits (136), Expect = 2e-23 Identities = 159/214 (74%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| |||||||| || |||| || |||| || ||||||||| Sbjct 8185 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATTACTCTCGAGGTTGAGTCGTCT 8244 Query 25059 GACACTATCGAGTCAC-TGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||||||||| | || | || || || | ||| ||||| ||||| ||||| || || | Sbjct 8245 GACACTATCGA-TAACGTCAAGGCCAAGATTCA-GGACAAGGAAGGCATTCCTCCCGATC 8302 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | ||||| | ||||| ||||| || || | || || | ||||| || |||||||| Sbjct 8303 AGCAGCGTCTCATTTTCGCCGGAAAGCAGCTTGAGGACGGCCGCACCTTGTCCGATTACA 8362 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 | || || |||||||| || || ||| | || || Sbjct 8363 ACATCCAGAAAGAATCGACCCTCCATCTCGTTCT 8396 >seq62 Length=118391 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||||||||| || || ||||||| | ||||| ||||| || Sbjct 71410 ATGCAGATCTTTGTCAAGACTTTGACTGGCAAGACCATCACTCTTGAAGTCGAGTCTTCG 71351 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| | ||| || ||| ||||| ||||| || || || || || Sbjct 71350 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATCCCTCCCGATCAG 71291 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || || |||||||| || | ||||| | |||||| | |||||||| Sbjct 71290 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAAGACGGCCGCACTCTTTCAGATTACAAC 71231 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || |||||||| || ||||| || || Sbjct 71230 ATCCAGAAGGAATCCACACTTCATTTGGTCCT 71199 Score = 87.8 bits (96), Expect = 2e-12 Identities = 145/207 (70%), Gaps = 8/207 (4%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| | ||||| || ||||||| |||| || ||||| || Sbjct 71638 ATGCAGATCTTTGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTTGAGTCCTCG 71579 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||| || || |||| | || || | ||| || || || || || |||||||| Sbjct 71578 GACACCATTGACAACGTCA---AGGCCAAGATTCAG-GATAAGGAGGGTATCCCACCTGA 71523 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||| ||||| |||| ||||| || || || | || |||| ||||| | || || Sbjct 71522 CCAGCAGCGTCTTATCTTTGCTGGTAAGCAGCTCGAGGATGGCCGCACCCTCTCGGACTA 71463 Query 25175 CAATATTCAAAAAGAATCCACGCTACA 25201 ||| || || || || ||||| || || Sbjct 71462 CAACATCCAGAAGGAGTCCACTCTTCA 71436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433260189584600