Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09-
20] 12,840 sequences; 23,769,677 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq69 228 9e-55
>seq69
Length=107628
Score = 228 bits (252), Expect = 9e-55
Identities = 389/561 (69%), Gaps = 5/561 (1%)
Strand=Plus/Minus
Query 93089 AAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTT 93148
||||| ||||||||||| || | || || || || || || | ||| ||| ||| ||
Sbjct 12623 AAGCAGGCAAAGTCGGTGTGCATGCCCTCATCACGCGAGATGAGCTCGTTGGAGAAAGTG 12564
Query 93149 AAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaa 93208
| ||| || | || || || ||||||||||| || || ||||| || ||| || ||
Sbjct 12563 AGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAACGAACCGGAGAAG 12504
Query 93209 aaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCG-GAATTACT 93267
|| |||||||| ||||| || || || || | ||||||||||||| | ||| || |
Sbjct 12503 AAGATACCTTCGACGGCGGCGAAAGCGACGAGACGTTCGGCAAAAGTGGCGCGACGGTCC 12444
Query 93268 GCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGC 93327
| |||||| | |||||| |||||||||| ||| | || | || |||| ||
Sbjct 12443 G-AGATCCAACGAAGAGCCCAGTCGGCTTTTTGCTTGACGACGGGGATGGTCTCGACGGC 12385
Query 93328 GTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATA 93387
|| || ||| | || |||| || | || || ||||| || ||||| | || || ||
Sbjct 12384 GTCGAAGAGGAACTCGCGCTGCTCGGGTTCGCGGATGTAGGTGTCGATGAGGAGGGAGTA 12325
Query 93388 CATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGT 93447
|||| || |||| |||||||| || ||||| |||||||| || | |||||| |
Sbjct 12324 GGTTTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGAGCTTCGGC 12265
Query 93448 GATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGC 93507
| || ||||| || |||| ||| |||||||| || || || ||||| ||||| ||
Sbjct 12264 GGCTTGGACTTCAGAGGAGAATCGCTCGACGAGATTCTCGTTAACGATACCGTCGGAAGC 12205
Query 93508 TGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGC---TTATC 93564
|| || || || | | || || || || ||| | || || ||| || ||
Sbjct 12204 GGCGAAGAAGGCAAGGACGTGAGAGATGAAGTGACGCTCGTTGTCGTTGAGCTTGTTGTC 12145
Query 93565 CCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGC 93624
||||||| ||||| || ||||| |||| |||||| | ||||| || || ||||| ||
Sbjct 12144 CCAATCGTGAAGATCCTTGGAAAGGTCGATCTCTTCGGCGGTCCAGAAGGAGGCTTCGGC 12085
Query 93625 TTTTTTGTACATATCCCATAT 93645
|| |||||||| | ||| ||
Sbjct 12084 CTTCTTGTACATTTGCCAGAT 12064
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556771423841600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |