Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09- 20] 12,840 sequences; 23,769,677 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq69 228 9e-55 >seq69 Length=107628 Score = 228 bits (252), Expect = 9e-55 Identities = 389/561 (69%), Gaps = 5/561 (1%) Strand=Plus/Minus Query 93089 AAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTT 93148 ||||| ||||||||||| || | || || || || || || | ||| ||| ||| || Sbjct 12623 AAGCAGGCAAAGTCGGTGTGCATGCCCTCATCACGCGAGATGAGCTCGTTGGAGAAAGTG 12564 Query 93149 AAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaa 93208 | ||| || | || || || ||||||||||| || || ||||| || ||| || || Sbjct 12563 AGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAACGAACCGGAGAAG 12504 Query 93209 aaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCG-GAATTACT 93267 || |||||||| ||||| || || || || | ||||||||||||| | ||| || | Sbjct 12503 AAGATACCTTCGACGGCGGCGAAAGCGACGAGACGTTCGGCAAAAGTGGCGCGACGGTCC 12444 Query 93268 GCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGC 93327 | |||||| | |||||| |||||||||| ||| | || | || |||| || Sbjct 12443 G-AGATCCAACGAAGAGCCCAGTCGGCTTTTTGCTTGACGACGGGGATGGTCTCGACGGC 12385 Query 93328 GTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATA 93387 || || ||| | || |||| || | || || ||||| || ||||| | || || || Sbjct 12384 GTCGAAGAGGAACTCGCGCTGCTCGGGTTCGCGGATGTAGGTGTCGATGAGGAGGGAGTA 12325 Query 93388 CATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGT 93447 |||| || |||| |||||||| || ||||| |||||||| || | |||||| | Sbjct 12324 GGTTTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGAGCTTCGGC 12265 Query 93448 GATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGC 93507 | || ||||| || |||| ||| |||||||| || || || ||||| ||||| || Sbjct 12264 GGCTTGGACTTCAGAGGAGAATCGCTCGACGAGATTCTCGTTAACGATACCGTCGGAAGC 12205 Query 93508 TGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGC---TTATC 93564 || || || || | | || || || || ||| | || || ||| || || Sbjct 12204 GGCGAAGAAGGCAAGGACGTGAGAGATGAAGTGACGCTCGTTGTCGTTGAGCTTGTTGTC 12145 Query 93565 CCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGC 93624 ||||||| ||||| || ||||| |||| |||||| | ||||| || || ||||| || Sbjct 12144 CCAATCGTGAAGATCCTTGGAAAGGTCGATCTCTTCGGCGGTCCAGAAGGAGGCTTCGGC 12085 Query 93625 TTTTTTGTACATATCCCATAT 93645 || |||||||| | ||| || Sbjct 12084 CTTCTTGTACATTTGCCAGAT 12064 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556771423841600