Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09- 20] 12,840 sequences; 23,769,677 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq81 122 2e-22 seq72 84.2 4e-11 >seq81 Length=91273 Score = 122 bits (134), Expect = 2e-22 Identities = 364/556 (65%), Gaps = 13/556 (2%) Strand=Plus/Minus Query 293115 CTGCGTCTGATCGACAAAGGCACCACGATCAGCAGCGAGGTCAATCACTGTCTTCATAGA 293174 ||||| ||| || || |||||||| || || || | ||| || | | |||| | Sbjct 57952 CTGCGACTGGCAGATGAAAGCACCACGGTCGGCCGCCATGTCGATGATAGCCTTCTGACT 57893 Query 293175 GATCTCCCACGATGTCTTGTACACTGCCTTGACA---TCAGGATGAATGCCAATAACCTT 293231 ||||||||| |||||||| | ||||| | ||||| || || ||| || Sbjct 57892 GATCTCCCAAACGGTCTTGTAGAGCTTCTTGATACGGTCAGGG---ATACCGGGAACGTT 57836 Query 293232 CTGGATAGACCCTCCGTTGGCAATAATCTGGTTCTTCATTGTCTCGGACCAAGTCCCACG 293291 ||| || || || |||| || || || |||||||||| || ||| |||| || | Sbjct 57835 CTGAATCGAACCACCGTGAGCGATGATACGGTTCTTCATGGTGTCGTTCCAAAGACCTTG 57776 Query 293292 AGCAATGAGCTCGCGGACAAGGTAAGAGTTGACAACGGGGAACTCACCAGCGAGAGTGCG 293351 ||| |||||| |||| | ||| |||||| || |||||||||||||||| || Sbjct 57775 CTCAACGAGCTCACGGAGCAACCAAGGGTTGACGACCTGGAACTCACCAGCGAGTACACG 57716 Query 293352 ACGGCTGTAAATGTTCGAAGTGATGGGTTCGGCTGCCTCAACAGACCCGCAAATCTGAGC 293411 || ||| |||||||| ||| || ||| ||| | ||| ||||||| Sbjct 57715 GCGCGAGTAGATGTTCGAGGTGTAAGGCTCGAAGCACTCGTTGAAGCCGAGAATCTGACT 57656 Query 293412 AGTAGATGCGGTAGGCATAAGAGCAGTCGTCAGAGAGTTCCTCACACCCTTCTTGACACG 293471 || || || |||||||| |||| | || ||||| | | ||| | |||| || Sbjct 57655 GGTCGAGGCAGTAGGCATGGGAGCGAGCAAGAGCGAGTTGCGAAGACCGTGCTTGGCAAT 57596 Query 293472 C---GATTCGAGACCCGCCCAGT-CCAGAGCAGTCTGA-GGTGTAACACCCCAGAGATGA 293526 | | | ||| | ||||||| |||||| ||| || |||||||||||||| | | Sbjct 57595 CTTGGCCTTGAGGCTGGCCCAGTCCCAGAG--GTCGGAGGGTGTAACACCCCACATGTCG 57538 Query 293527 TACTGCATGATACCCTTGCTGGCAGGAGACCCCTCAAAGGTGGGATGGGGGCCATGCTCA 293586 ||||| | ||||| || || || || | |||| | || ||| ||||| Sbjct 57537 TACTGGAGCTCACCCTGCGAAGCGGGGGAACCGGCGTAGGTCTCGTAGGTGCCGTGCTCC 57478 Query 293587 TCAGAGAGCTCGCAAGATGCCTCAACAGCAGCAAAGTAAATGTGCTCGAAGATCTCACGG 293646 | | |||||||| ||| ||| | |||||| ||| ||| ||||||||||| | | Sbjct 57477 TGGGCAAGCTCGCAGGATCGCTCGAGAGCAGCGTGGTAGATGGTCTCGAAGATCTGAACG 57418 Query 293647 TTGAGCTTGCGAGCCT 293662 ||||| ||| |||| Sbjct 57417 TTGAGGCGGCGGGCCT 57402 >seq72 Length=102933 Score = 84.2 bits (92), Expect = 4e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 280254 TGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCACGCTTTCCACCACATCGAG 280313 |||||||| |||||| || || | ||||||||| ||||||||||||||||||||||| Sbjct 9169 TGGAAGCACCCCAACTTGGTCATCGGTTACGTCGCCCAGCACGCTTTCCACCACATCGAC 9110 Query 280314 AACCACCTGGACATGACTCCTAACCAATACATTCAGTGGCGCTA 280357 | ||||| |||| ||| ||| | ||||| | ||||| || Sbjct 9109 CAGCACCTCGACAAGACCCCTCTGGACTACATGCTCTGGCGTTA 9066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027667707998440