Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09- 20] 12,840 sequences; 23,769,677 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq144 114 1e-20 seq62 100 2e-16 seq33 89.7 4e-13 >seq144 Length=29207 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || || || | || || || || || |||||||| || Sbjct 8186 ATACCACCACGGAGACGGAGGACCAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCC 8127 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || |||||| | |||||||||||| ||||||||||||| ||||| ||| Sbjct 8126 GAGAGGGTTCGGCCATCTTCCAACTGTTTACCAGCGAAGATGAGACGCTGCTGGTCGGGA 8067 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || || ||||| ||| || || | | |||| |||||||| || || Sbjct 8066 GGGATACCCTCCTTGTCCTGAATTTTGGCCTTGACGTTGTCAATGGTGTCGGAAGACTCC 8007 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || || | ||| | || || ||||||||||| || ||||| ||||||||| Sbjct 8006 ACCTCGAGGGTGATGGTCTTACCGGTCAGAGTCTTGACAAAGATCTGCATG 7956 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | ||| | ||| | || |||||||| || |||||||||||| Sbjct 8414 ATACCACCACGAAGACGGAGAACGAGATGGAGGGTCGATTCTTTCTGGATGTTGTAATCG 8355 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || || || ||||| || || || ||| | ||||||||||| || || ||| Sbjct 8354 GACAAGGTGCGGCCGTCCTCAAGCTGCTTTCCGGCGAAAATGAGACGCTGCTGATCGGGA 8295 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||| ||||| |||||| || | | || | ||||| | || || Sbjct 8294 GGAATGCCTTCCTTGTCCTGAATCTTGGCCTTGACGTTATCGATAGTGTCAGACGACTCA 8235 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || |||||||||| || || || || |||||||| Sbjct 8234 ACCTCGAGAGTAATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 8185 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| |||| | ||| | || | ||| || |||||||||||||| ||| Sbjct 8642 ATACCACCACGGAGTCGGAGAACGAGGTGAAGCGTGCTCTCCTTTTGAATGTTGTAGTCG 8583 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || || |||||||| || ||||| ||||||| || || || || || Sbjct 8582 GAGAGTGTTCGGCCGTCCTCAAGTTGCTTTCCAGCAAAGATGAGGCGTTGCTGATCAGGT 8523 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||| ||||| ||||| |||| | || | ||| || | || ||| Sbjct 8522 GGAATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTGTCGATGGTATCAGAAGACTCG 8463 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || ||||| || || ||||| || || |||||||| Sbjct 8462 ACCTCGAGAGTAATGGTCTTGCCTGTAAGGGTTTTGACGAAGATCTGCAT 8413 >seq62 Length=118391 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| || | | || ||||| | || ||||| || || ||||||||||| Sbjct 71183 ACCACCACGGAGACGGAGGACCAAATGAAGTGTGGATTCCTTCTGGATGTTGTAATCTGA 71242 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 | ||| || ||||| || || || || ||| ||||||| ||||| || || ||||| Sbjct 71243 AAGAGTGCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATCGGGAGG 71302 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 |||||||| ||||| ||||| || | | || | |||||| | || ||||| Sbjct 71303 GATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAAGACTCGAC 71362 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | || | || ||||| |||| ||| || ||||| |||||||| Sbjct 71363 TTCAAGAGTGATGGTCTTGCCAGTCAAAGTCTTGACAAAGATCTGCAT 71410 >seq33 Length=194022 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || |||||||| || | || || |||||| || || ||||| Sbjct 184311 GTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGTCCATCTTCGAGCTGCTTACCG 184252 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| ||||||||||||| || || || ||||||||||| ||||| ||||| || Sbjct 184251 GCGAAGATGAGACGCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTG 184192 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | |||||| | || || || || | ||| | || ||||| || || || Sbjct 184191 ACGTTGTCGATGGTGTCCGAAGACTCCACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTC 184132 Query 114366 TTTACAAAAATCTGCAT 114382 || ||||| |||||||| Sbjct 184131 TTAACAAAGATCTGCAT 184115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420068654218080