Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09- 20] 12,840 sequences; 23,769,677 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq81 383 3e-101 seq69 232 1e-55 >seq81 Length=91273 Score = 383 bits (424), Expect = 3e-101 Identities = 1157/1765 (66%), Gaps = 75/1765 (4%) Strand=Plus/Minus Query 243874 GAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGGCCATGGTGATGAG 243933 || |||||| ||||| |||| || ||| | | || || || |||||| ||||| Sbjct 57964 GATGTTGAGCGACTGCGACTGGCAGATGAAAGCACCACGGTCGGCCGCCATGTCGATGAT 57905 Query 243934 GTCCTTCTGA--GATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAAC 243991 |||||||| ||| || || ||| |||||||||| ||||| | || |||| Sbjct 57904 AGCCTTCTGACTGATCTCCCAAACG--GTCTTGTAGAGCTTCTTGATACGGTCAGGGATA 57847 Query 243992 CCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGCATGTTATCGTTC 244051 || | |||||| | ||| || ||| |||||| || | |||| | |||||| Sbjct 57846 CCGGGAACGTTCTGAATCGAACCACCGTGAGCGATGATACGGTTCTTCATGGTGTCGTTC 57787 Query 244052 CACAGGCC-----CAA-GCGCTCCAGCGCCTCGACCAGGTGCCTGTTCACCACCTGAAAC 244105 || || || ||| | |||| || | |||| | | || || ||||| ||| Sbjct 57786 CAAAGACCTTGCTCAACGAGCTCA--CGGAGCAACCAAGGG----TTGACGACCTGGAAC 57733 Query 244106 TCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTG 244165 || || | || || |||||| ||||| ||| | || ||||||| || ||| || Sbjct 57732 TCACCAGCGAGTACACGGCGCGAGTAGATGTTCGAGGTGTAAGGCTCGAAGCACTCGTTG 57673 Query 244166 TTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTC 244225 ||| || ||||| || ||||| |||||||| | | || || ||| | Sbjct 57672 AAGCCGAGAATCTGACTGGTCGAGGCAGTAGGCATGGGAGCGAGCAAGAGCGAGTTGCGA 57613 Query 244226 ACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCCCGAGAGGTCC 244285 | |||||| | || | |||| | ||||||||| |||||| Sbjct 57612 AGACCGTGCTTGGCAATCTTGGCCTTGAGGCTGGCCCAGTCCCA---------GAGGTCG 57562 Query 244286 TCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGA-CGGGGCTGCCCTC 244344 | || | | ||||||||||| |||| ||| |||| || | ||||| || | Sbjct 57561 GAGGGTGTAACACCCCACATGTCGTACTGGAGCTCACCCT-GCGAAGCGGGGGAACCGGC 57503 Query 244345 GTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCG-TCGAGGGCGGCGT 244403 ||||||| ||||| |||| |||||| |||| ||| ||| ||||| || |||| Sbjct 57502 GTAGGTCTCGTAGGTGCCGTGCTCCTGGGCAAGCTCGCAGGA-TCGCTCGAGAGCAGCGT 57444 Query 244404 AGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGTGAAGGGGA 244463 ||||||||||||||||||| ||| | | |||||||| | | || | | Sbjct 57443 GGTAGATGGTCTCGAAGATCTGAACGTTGAGGCGGCGGGCCTCGGGCGACTCAAAAGCGT 57384 Query 244464 TGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTC 244523 |||||| ||||||||| |||| || || ||||| || ||||| |||||||||| ||| | Sbjct 57383 AGCCCATGATCATGAAGGCGTCAGCAAGACCCTGAACACCGATACCGATGGGTCGGTGGC 57324 Query 244524 GCTTGTTGGAGCGCATG---GCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGT 244580 || ||||||| | || || ||||| || ||||| ||||| |||||| | ||||| Sbjct 57323 GCATGTTGGA---CTTGCGAGCCTCGGGGACAGGGTAGTAGTTGATGTCGATGATCTTGT 57267 Query 244581 TGAGGTT---GCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGT 244637 | | ||| || | || | || ||| ||| || ||| ||| |||||||| | | Sbjct 57266 TCAAGTTTTTGCAGATGGCCTTGGCGACCTCGT--GCAAGC-GCTTGAAGTCGTAGACCT 57210 Query 244638 AGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGC 244697 || | | ||||| | | | ||| |||| |||| ||||| Sbjct 57209 TGGTGACAGGGTCGATGAAGGT------------GGGGAGAGCGATCGAAGCCAAGTTGC 57162 Query 244698 AGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACT 244757 |||| || ||||| || | |||||| || ||||| ||||| ||||| ||||| Sbjct 57161 AGACAGCGACCTCATCGGGTGCACTGTACTCGATGATCTCTGTGCAAAGGTTGGAGCACT 57102 Query 244758 TGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGA 244817 ||||||| || |||| || || ||| |||| |||| ||||||||||| || |||| Sbjct 57101 TGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGGCAGCGTCCTTGTAAAGGATGA 57042 Query 244818 AGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGA 244877 |||| || |||||| ||||| |||||| | || |||||| | | |||||||| Sbjct 57041 AGGGGTTACCAGTCTCGGTCTGGGACTCGAGGATGGCGTACCAGAGCTTCTGAGCCTTGA 56982 Query 244878 CCGTCC--TGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGG 244935 | || | | |||| ||||| ||||||||||| ||| || ||| ||||| Sbjct 56981 CGGTGCGCTTGGAGCGA--CCCTCGGCCTCGTAGCGCTCGTAGAGACGCTCAAACTCCTC 56924 Query 244936 GCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGCC 244995 ||| || || | || ||||| ||| ||||||||||| ||| || ||| Sbjct 56923 GCCGTAGCAGTCAGCGAGACCGGGACACTCGTTAGGGCACATGAGCGACCAGTCACCGTT 56864 Query 244996 GTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGT 245055 | || |||||||| ||||||||| ||||| | ||||||||| | |||||| || | || Sbjct 56863 CTGCTCGACCCTCTTCATGAAGAGATCGGGAACCCAGAGGGCGTAGAAGAGCTCACGGGC 56804 Query 245056 CCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTG 245115 | ||| ||| || |||||| | || || | || || ||||| || ||| Sbjct 56803 ACGTACCTCCTCCTTACCGTGGTTCTTGCGGAGGTCAAGGAACTCGAAGACATCCGAGTG 56744 Query 245116 CCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCAC-CA 245174 ||| ||||| ||||||| || | ||| ||||| |||||||| || |||||||| || | Sbjct 56743 CCAAGGCTCAATGTAGATGGCAAAGGCACCGGGACGCTTGTTACCACCCTGGTCAACGTA 56684 Query 245175 TCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGG 245234 || | | | |||||||| || || | || || || ||||| | || |||| Sbjct 56683 TCGTGCAGTG-TTGTTGAAGACACGGAGCATGGGAACGATACCGTTGCTGACACCATTGG 56625 Query 245235 TGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTAGTCCGCCGG 245294 | || ||||||| ||| | || | || |||| |||| | || | || || | Sbjct 56624 TACCGGCAATGTAGGAGCCAGTTCCTCGGATGTTGTGGATGTTGAGACCGATACCACCAG 56565 Query 245295 CGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCG 245354 || ||||||||| | ||||||| |||||| |||||| || || || || ||| Sbjct 56564 CGGTCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATACCGTCGATCGAGTCAT 56505 Query 245355 ACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACA 245414 ||||||| ||| || || || || || |||||||| | ||| | | | |||||| | Sbjct 56504 CCTTCATGGTGACAAGGAAACACGACGAGAGCTGGGGGTGGGGAGTACCAGCGTTGAAGA 56445 Query 245415 GAGTGGGGCTGGCGTGGGTAAAGTAGCGGCT-CGAGAGGAACCCGTACGTCTGGAGCAGA 245473 | |||||| ||||| || ||| | | || ||| | || ||| |||| || | Sbjct 56444 GGGTGGGGGAAGCGTGTGTGAAG-AACTTCTGCGACATGAGATTGTAGGTCTCGA-TGGC 56387 Query 245474 GC-GTCGATGTTGTCGCCGTGGATCTGCAGGGCGCACCTCATGAGGGTGTGCTGGGGCGT 245532 || ||||||| ||||||||||| | ||| | |||||| |||||||||| Sbjct 56386 GCTTTCGATGTCCTCGCCGTGGATACCAACAGCGACACGCATGAGCATGTGCTGGGGACG 56327 Query 245533 CTCGATGGGTCCCTCGGGTCCCTT------GAGCATGTAGGAGCGCTCGAGCGTCTTGAA 245586 ||| | ||| | || || ||| | |||||| |||||||| |||||||| Sbjct 56326 CTC---AGCAACCTTG---CCGTTAATACGGAGAAGGTAGGATCGCTCGAGGGTCTTGAA 56273 Query 245587 CCCAAAGTACGAGTAGCCAAAGTCG 245611 || ||| | |||| |||||| Sbjct 56272 ACCGAAGAAGTTGTAGTGGAAGTCG 56248 >seq69 Length=107628 Score = 232 bits (256), Expect = 1e-55 Identities = 497/731 (68%), Gaps = 14/731 (2%) Strand=Plus/Plus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| |||||||||||||| | |||| |||||||||||| ||||| ||||| Sbjct 12064 ATCTGGCAAATGTACAAGAAGGCCGAAGCCTCCTTCTGGACCGCCGAAGAGATCGACCTT 12123 Query 42360 GCCAAGGACACGGCCGGCTGGGAGT-CACTGTCT--GAGAACGAAAAGTTTTTCCTCAAA 42416 ||||||| || ||||| || || || ||||| ||| || Sbjct 12124 TCCAAGGATCTTCACGATTGGGACAACAAGCTCAACGACAACGAGCGTCACTTCATCTCT 12183 Query 42417 AACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGG 42476 || | || |||||||||||||| || ||||| || || || ||||| || | | | Sbjct 12184 CACGTCCTTGCCTTCTTCGCCGCTTCCGACGGTATCGTTAACGAGAATCTCGTCGAGCGA 12243 Query 42477 TTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATA 42536 ||| || || || | || || |||||||||||||| |||||||| || Sbjct 12244 TTCTCCTCTGAAGTCCAAGCCGCCGAAGCTCGCTGCTTCTACGGTTTCCAGATCATGATG 12303 Query 42537 GAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTC 42596 |||||| | ||||| || ||| || || || |||| ||||||| || |||| Sbjct 12304 GAGAACATCCACTCCGAAACCTACTCCCTCCTCATCGACACCTACATCCGCGAACCCGAG 12363 Query 42597 GAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGAC 42656 |||| | || ||| | ||| | ||||| || ||| | ||||| | || || ||| Sbjct 12364 CAGCGCGAGTTCCTCTTCGACGCCGTCGAGACCATCCCCGTCGTCAAGCAAAAAGCCGAC 12423 Query 42657 TGGGCGCTCAACTGGATCGAGAGTCC--CGACGCAACGTTCGGCGAGAGGCTGGTAGCCT 42714 ||||| || |||||| | | || || ||| || || | ||| | || || || | Sbjct 12424 TGGGCTCTTCGTTGGATCTCG-GACCGTCG-CGCCACTTTTGCCGAACGTCTCGTCGCTT 12481 Query 42715 TTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGC 42774 | |||||||||| || ||||||||||| || | ||||| |||||||||||||||||| Sbjct 12482 TCGCCGCCGTCGAAGGTATCTTCTTCTCCGGTTCGTTCGCTTCCATCTTCTGGCTCAAGA 12541 Query 42775 AG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGG 42833 || ||| || |||||||| ||||| ||||| ||||| |||||| | || ||||| Sbjct 12542 AGCGTGGTCTC-ATGCCCGGTCTCACTTTCTCCAACGAGCTCATCTCGCGTGATGAGGGC 12600 Query 42834 CTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCT-CGAA 42892 |||| | |||||||||||| | || |||||| || |||| | | || || | Sbjct 12601 ATGCACACCGACTTTGCCTGCTTGCTCTTCTCG---CATCTCAAG-AAGCGCGCTGCTCC 12656 Query 42893 GGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCA 42952 ||| || | || || | ||||| || |||||||||||| ||| | || | Sbjct 12657 CGAGACCGTTCTCAAGATTATTTCCGAGGCTGTAGAGATCGAGAAGAGCTTCTTGACCGA 12716 Query 42953 GTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTA 43012 | ||||||| || || | ||||||||| | | |||||||||| ||||| |||| Sbjct 12717 TGCATTGCCCGTTTCGCTCATTGGCATGAACGCCAAGCTCATGTGCACCTACATTGAGTA 12776 Query 43013 CGTCGCCGACC 43023 ||| ||||||| Sbjct 12777 CGTGGCCGACC 12787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944187633558400