Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09-
20] 12,840 sequences; 23,769,677 total letters
Query= NC_009503.1
Length=124121
Score E
Sequences producing significant alignments: (Bits) Value
seq144 96.9 3e-15
>seq144
Length=29207
Score = 96.9 bits (106), Expect = 3e-15
Identities = 163/232 (70%), Gaps = 8/232 (3%)
Strand=Plus/Minus
Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959
|||||| | || || ||||| || ||||| |||||||||||||| |||||||| || |
Sbjct 8868 ACCTCCGCGCAAACGAAGCACAAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCCG- 8810
Query 33960 CAATTGT-CGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCG 34018
|| || || | || ||||| ||||| || ||||| || || |||||||| || |
Sbjct 8809 AAAGGGTGCGACCATCTTCCAACTGCTTACCTGCAAAGATAAGACGCTGCTGGTCAGGGG 8750
Query 34019 GCACGCTCTCTTTGTCCATAATTTTTTGCTT---AATGGAACTCACACTATCAGTAGATT 34075
| | || ||| |||||| ||| || ||| | || | || | || | || |
Sbjct 8749 GGATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATC---GTGTCCGAGGACT 8693
Query 34076 CGCATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127
|| ||| | || || || ||||| || ||||| || ||||||||||||||
Sbjct 8692 CGACTTCCAATGTGATGGTCTTTCCTGTGAGTGTCTTGACAAAGATTTGCAT 8641
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969
|| || || || || ||||||||||||||||| ||||||||||| || | | | |||
Sbjct 8630 AGTCGGAGAACGAGGTGAAGCGTGCTCTCCTTTTGAATGTTGTAGTCGGAGAGTGTTCGG 8571
Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCT 34029
|||| || | |||||| || ||||| || ||||| |||||||| || | || ||
Sbjct 8570 CCGTCCTCAAGTTGCTTTCCAGCAAAGATGAGGCGTTGCTGATCAGGTGGAATGCCTTCC 8511
Query 34030 TTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCATTCGACCGTT 34089
|||||| || || ||| | | | |||||| ||| ||| |||| ||
Sbjct 8510 TTGTCCTGGATCTTGGCCTTTACGTTGTCGATGGTATCAGAAGACTCGACCTCGAGAGTA 8451
Query 34090 ATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127
|| || || || || || ||||| || ||||| |||||
Sbjct 8450 ATGGTCTTGCCTGTAAGGGTTTTGACGAAGATCTGCAT 8413
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397000264697680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |