Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09-
20] 12,840 sequences; 23,769,677 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq144 134 3e-26
seq62 134 3e-26
seq82 102 2e-16
>seq144
Length=29207
Score = 134 bits (148), Expect = 3e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | || || | || | ||| || || ||||| || ||||| | |
Sbjct 8183 CCACCACGGAGACGGAGGACCAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCCGAG 8124
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || || ||||| || ||||| || |||||||| |||||||| || |||
Sbjct 8123 AGGGTTCGGCCATCTTCCAACTGTTTACCAGCGAAGATGAGACGCTGCTGGTCGGGAGGG 8064
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || || || ||||| ||||| || || ||||| || || | ||| || || ||
Sbjct 8063 ATACCCTCCTTGTCCTGAATTTTGGCCTTGACGTTGTCAATGGTGTCGGAAGACTCCACC 8004
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| ||||| ||||| ||||||||||||||||| || ||||||||
Sbjct 8003 TCGAGGGTGATGGTCTTACCGGTCAGAGTCTTGACAAAGATCTGCAT 7957
Score = 131 bits (144), Expect = 4e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | || |||||||| | || |||||| ||||| || || ||||
Sbjct 8411 CCACCACGAAGACGGAGAACGAGATGGAGGGTCGATTCTTTCTGGATGTTGTAATCGGAC 8352
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| ||||| ||||| || | || ||||| ||||| || |||||||| ||| ||
Sbjct 8351 AAGGTGCGGCCGTCCTCAAGCTGCTTTCCGGCGAAAATGAGACGCTGCTGATCGGGAGGA 8292
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| ||||| || ||||| || || || || ||||| || |||| || ||| || ||
Sbjct 8291 ATGCCTTCCTTGTCCTGAATCTTGGCCTTGACGTTATCGATAGTGTCAGACGACTCAACC 8232
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| || || ||||| ||||||| ||||||||||| ||||||||
Sbjct 8231 TCGAGAGTAATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 8185
Score = 114 bits (126), Expect = 3e-20
Identities = 145/198 (73%), Gaps = 1/198 (1%)
Strand=Plus/Minus
Query 288277 GTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCT 288336
||||| || || ||||| || ||||| | ||| ||||| |||||||| || || || |||
Sbjct 9066 GTGCTCTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGACCGTCTTCCAACTGCTTACCT 9007
Query 288337 GCGAAGATCAGACGCTGTTGAGAATCTGGGATTC-CTTCTTTATCCTGGATTTTCGCTTT 288395
|| ||||| |||||||| || |||| | | || || || || || || || ||
Sbjct 9006 GCAAAGATAAGACGCTGCTGGTCCAGGGGGAATATCCTCCTTGTCTTGAATCTTGGCCTT 8947
Query 288396 CACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGT 288455
||||| || || | || ||| || || ||||| ||||||||||| || || || ||
Sbjct 8946 GACGTTGTCAATGGTGTCCGACGACTCAACCTCGAGGGTGATCGTCTTTCCAGTGAGCGT 8887
Query 288456 CTTGACGAATATCTGCAT 288473
|||||| || ||||||||
Sbjct 8886 CTTGACAAAGATCTGCAT 8869
>seq62
Length=118391
Score = 134 bits (148), Expect = 3e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||||||||| | || ||||| |||| ||| || || ||||| || ||||| | |
Sbjct 71412 CCACCGCGGAGACGGAGGACGAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAG 71471
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| || || || | || || || || ||||| |||||||| || | ||||
Sbjct 71472 AGGGTGCGGCCATCCTCGAGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCAGGTGGG 71531
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || || |||||||| || || || || ||||| || || | || || || ||
Sbjct 71532 ATACCCTCCTTATCCTGAATCTTGGCCTTGACGTTGTCAATGGTGTCCGAGGACTCAACC 71591
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| ||||| ||||| ||||| || |||||||| || ||||||||
Sbjct 71592 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 71638
>seq82
Length=90256
Score = 102 bits (112), Expect = 2e-16
Identities = 300/449 (67%), Gaps = 20/449 (4%)
Strand=Plus/Plus
Query 325322 ATATATCGTGCACTCGCGTGATCCTTACCACCCTGCAATCTCGAACCGAACTGGCCCTCC 325381
|| |||||| | |||| ||| |||||||| |||||| |||||||| || |||
Sbjct 61737 ATGTATCGTCCCGACGCGGCATCTTTACCACCGAGCAATCGAGAACCGAATTGACCCCTT 61796
Query 325382 GGCAACAACCAG-TTGATGTTATTGCTTCCGACATAATCCTGTGCAAGGTTCACGATGGT 325440
|| | ||| || |||| ||| ||||| |||||| | | |||||| || || |||||
Sbjct 61797 GG-ATCAAGCAAATTGACGTTGTTGCTACCGACAAAGTTCTGTGCGAGACCGACAATGGT 61855
Query 325441 CCCTTGCAGAGATGCTTCGCCATGGTGATAGGCGCTATGCTCTGCAACGTAACCGCTGAA 325500
| | || | || || || ||||| |||||| | || | |||| |||| ||
Sbjct 61856 CATGTTGAGCGCAGCGTCACCGTGGTGGTAGGCGGTTTGACCCATAACGCTACCGACCAA 61915
Query 325501 CTGTGCAACCTTCACGTCGG--TCG-TCAAATTGCGCTTGAAAGCTGAA-TATATCACTT 325556
||| |||||||| || | | | || ||||||| ||| ||| | || || |
Sbjct 61916 CTGGTTGACCTTCACTTCAGAGTAGCTC---TTGCGCTCGAACA-TGACGTGAATGACCT 61971
Query 325557 TCCGTTGAGAAGGTTTGAAACCATCAACGACCGACGGAATGCTTCGTTCCAGATCGTACC 325616
| || ||| ||| |||| |||||| ||||| || |||||| || | ||| |
Sbjct 61972 TTCGCTGACCAGGCTTGAGACCATCGACGACGGAAGGAATGGAACGAACGTTGTCGGCCA 62031
Query 325617 GCGAGAACAAAATAAGTTCCTTGTCGATGAAGTCGGGAACGGGAACCTCGGGCTTCTTGT 325676
|||||| | || || || |||| ||||||||||| | ||||| || | | ||||
Sbjct 62032 TCGAGAAGAGGATGAGCTCTTTGTTGATGAAGTCGGCATAGGGAATCTTGTCGATGTTGT 62091
Query 325677 GGTCAAGTTGATTTCCTGGTTCGTA-TGCCGTCATCCACTCCTTGCGATCCTCGGC--TC 325733
||||||| | | ||||| | | || || | ||||||||| || || || || ||
Sbjct 62092 GGTCAAGGTAGGTGCCTGGACGGAACTGGCG-AAGCCACTCCTTACGGTCATCAGCCTTC 62150
Query 325734 GTGACTTGTTGA----AAGAACGGTCAAT 325758
| |||||||| |||| || |||||
Sbjct 62151 TT--CTTGTTGAAGGCAAGATCGATCAAT 62177
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179460332105520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |