Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09- 20] 12,840 sequences; 23,769,677 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq82 109 1e-18 >seq82 Length=90256 Score = 109 bits (120), Expect = 1e-18 Identities = 305/455 (67%), Gaps = 20/455 (4%) Strand=Plus/Plus Query 297437 GTGAAAATATATCGTGCACTCGCGTGATCCTTACCACCCTGCAATCTCGAACCGAACTGG 297496 ||||| || |||||| | |||| ||| |||||||| |||||| |||||||| || Sbjct 61731 GTGAAGATGTATCGTCCCGACGCGGCATCTTTACCACCGAGCAATCGAGAACCGAATTGA 61790 Query 297497 CCCTCCGGCAACAACCAG-TTGATGTTATTGCTTCCGACATAATCCTGTGCAAGGTTCAC 297555 ||| || | ||| || |||| ||| ||||| |||||| | | |||||| || || Sbjct 61791 CCCCTTGG-ATCAAGCAAATTGACGTTGTTGCTACCGACAAAGTTCTGTGCGAGACCGAC 61849 Query 297556 GATGGTCCCTTGCAGAGATGCTTCGCCATGGTGATAGGCGCTATGCTCTGCAACGTAACC 297615 |||||| | || | || || || ||||| |||||| | || | |||| ||| Sbjct 61850 AATGGTCATGTTGAGCGCAGCGTCACCGTGGTGGTAGGCGGTTTGACCCATAACGCTACC 61909 Query 297616 GCTGAACTGTGCAACCTTCACGTCGG--TCG-TCAAATTGCGCTTGAAAGCTGAA-TATA 297671 | ||||| |||||||| || | | | || ||||||| ||| ||| | | Sbjct 61910 GACCAACTGGTTGACCTTCACTTCAGAGTAGCTC---TTGCGCTCGAACA-TGACGTGAA 61965 Query 297672 TCACTTTCCGTTGAGAAGGTTTGAAACCATCAACGACCGACGGAATGCTTCGTTCCAGAT 297731 | || || || ||| ||| |||| |||||| ||||| || |||||| || | | Sbjct 61966 TGACCTTTCGCTGACCAGGCTTGAGACCATCGACGACGGAAGGAATGGAACGAACGTTGT 62025 Query 297732 CGTACCGCGAGAACAAAATAAGTTCCTTGTCGATGAAGTCGGGAACGGGAACCTCGGGCT 297791 || | |||||| | || || || |||| ||||||||||| | ||||| || | Sbjct 62026 CGGCCATCGAGAAGAGGATGAGCTCTTTGTTGATGAAGTCGGCATAGGGAATCTTGTCGA 62085 Query 297792 TCTTGTGGTCAAGTTGATTTCCTGGTTCGTA-TGCCGTCATCCACTCCTTGCGATCCTCG 297850 | ||||||||||| | | ||||| | | || || | ||||||||| || || || Sbjct 62086 TGTTGTGGTCAAGGTAGGTGCCTGGACGGAACTGGCG-AAGCCACTCCTTACGGTCATCA 62144 Query 297851 GC--TCGTGACTTGTTGA----AAGAACGGTCAAT 297879 || || | |||||||| |||| || ||||| Sbjct 62145 GCCTTCTT--CTTGTTGAAGGCAAGATCGATCAAT 62177 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102698562454000