Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09- 20] 12,840 sequences; 23,769,677 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq81 208 9e-49 seq82 132 6e-26 seq69 107 2e-18 >seq81 Length=91273 Score = 208 bits (230), Expect = 9e-49 Identities = 916/1425 (64%), Gaps = 41/1425 (3%) Strand=Plus/Minus Query 113915 AACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCA 113974 |||||||| ||||| || | | ||||| || | ||||| ||||| |||||||| Sbjct 57735 AACTCACCAGCGAGTACACGGCGCGAGTAGATGTTCGAGGTGTAAGGCTCGAAGCACTCG 57676 Query 113975 TTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTA 114034 ||| || | || || ||| ||||| || |||||||| || | | || ||| Sbjct 57675 TTGAAGCCGAGAATCTGACTGGTCGAGGCAGTAGGCATGGGAGCGAGCAAGAGCGAGTTG 57616 Query 114035 CGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAG---TTGAGCTTT 114091 || ||||| | | ||| |||||||| | ||||||| || | | | Sbjct 57615 CGAAGACCGTGCTTGGCAATCTTGGCCTTGAGGCTGGCCCAGTCCCAGAGGTCGGAGGGT 57556 Query 114092 GTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAAT 114151 || | ||| ||||| || ||||||| ||| || || || || || || | | Sbjct 57555 GTAACACCC---CACATGTCGTACTGGAGCTCACCCTGCGAAGCGGGGGAACCGGCGTAG 57499 Query 114152 GTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGC-TCGCCTCGAGGGCTGCGTGATA 114210 |||||||| | ||| | ||| || | ||| || |||| ||||| || ||||| || Sbjct 57498 GTCTCGTAGGTGCCGTGCTCCTGGGCAAGCTCGCAGGATCGC-TCGAGAGCAGCGTGGTA 57440 Query 114211 CATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCG-AGTC 114269 || ||||| || || || | || | ||||||| || ||||| ||| || | Sbjct 57439 GATGGTCTCGAAGATCTGAACGTTGAGGCGGCGGGCCTCGGGCGACTCAAAAGCGTAGCC 57380 Query 114270 GGCACAAA-ATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTC 114328 || | || || | || || ||||| || ||||||| || || || || || | | Sbjct 57379 --CATGATCATGAAGGCGTCAGCAAGACCCTGAACACCGATACCGATGGGTCGGTGGCGC 57322 Query 114329 ATATTAGACTTTCGAGCGGTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTATTT 114385 || || ||||| ||||| ||| || || || | || | ||||| | | | || Sbjct 57321 ATGTTGGACTTGCGAGC---CTCGGGGACAGGGTAGTAGTTGATGTCGATGATCTTGTTC 57265 Query 114386 AGATTTTTGGTGACAACCTTTGTGATTTCATG-AAGCTTTTCGTAATC--AAAACTGCGA 114442 | |||||| || |||| | || || || |||| || | | || | | || | Sbjct 57264 AAGTTTTTGCAGATGGCCTTGGCGACCTCGTGCAAGCGCTT-GAAGTCGTAGACCTTGGT 57206 Query 114443 GTCTCT-TCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTC 114501 | | || ||| | | || || ||||| || |||| || || |||| | ||| Sbjct 57205 GACAGGGTCGATGA---AGGTGGGGAGAGCGATCGAAGCCAAGTTGCAGACAGCGACCTC 57149 Query 114502 ATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAA 114561 ||| || ||||||| || || || || || | || || | ||| ||||| || | Sbjct 57148 ATCGGGTGCACTGTACTCGATGATCTCTGTGCAAAGGTTGGAGCACTTGATGGTACCGAG 57089 Query 114562 GTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGT 114621 |||||| || || ||| ||| || ||||||||||| ||| | || | || || Sbjct 57088 GTTCTTCTGGTTGCTCTTGCGGTTGGCAGCGTCCTTGTAAAGGATGAAGGGGTTACCAGT 57029 Query 114622 CTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGG 114680 ||| || ||||||| ||| || || | ||||| | || | | || | || ||| |||| Sbjct 57028 CTCGGTCTGGGACTCGAGGATGGCGTACCAGAGCTTCTGAGCCTTG-ACGGTGCGCTTGG 56970 Query 114681 CTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTG 114740 || ||||| ||||||| |||||| |||||||| || || | || | Sbjct 56969 AGCGACCCTCGGCCTCGTAGCGCTCGTAGAGACGCTCAAACTCCTCGCCGTAGCAGTCAG 56910 Query 114741 AGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCT 114800 ||| || || || | ||||| | ||| ||||| | ||| || ||| || | || Sbjct 56909 CGAGACCGGGACACTCGTTAGGGCACATGAGCGACCAGTCACCGTTCTGCTCGACCCTCT 56850 Query 114801 TCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCAT 114860 |||||||||| || || | |||||| || ||||||| || || || | || || | Sbjct 56849 TCATGAAGAGATCGGGAACCCAGAGGGCGTAGAAGAGCTCACGGGCACGTACCTCCTCCT 56790 Query 114861 CCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGT 114920 || || || || | || | || || | || ||||| |||||| || || | || Sbjct 56789 TACCGTGGTTCTTGCGGAGGTCAAGGAACTCGAAGACATCCGAGTGCCAAGGCTCAATGT 56730 Query 114921 ACACCGCGATTGACCCCTTACGACG---ACCAGCCTGGTTTACATACCTCGCTGTGGCAT 114977 | | || | | || ||| |||| |||||| || || | || ||| | Sbjct 56729 AGATGGCAAAGGCACCGGGACGCTTGTTACCACCCTGGTCAACGTATCGTGCAGTGTTGT 56670 Query 114978 TAAATACGCGAAGCATTGGAATGATACCAT--CAGATTGGCCATTTGTCCCCCGAAT--A 115033 | || || || ||||| |||| |||||| | | || ||||| || || ||| | Sbjct 56669 TGAAGACACGGAGCATGGGAACGATACCGTTGCTGACA--CCATTGGTACCGGCAATGTA 56612 Query 115034 CGAGACTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAG 115093 ||| | | | ||| || | ||||||| | ||| ||||| || || ||| ||| Sbjct 56611 GGAGCC--AGTTCCTCGGATGTTGTGGATGTTGAGACCGATACCACCAGCGGTCTTGGAG 56554 Query 115094 ATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCG 115153 || ||||| | |||| || ||||||| ||||||||||||||| |||| | | | Sbjct 56553 ATCATGGCGCAGGTCTTGAGGGTGTCGTAGATACCGTCGATCGAGTCATCCTTCATGGTG 56494 Query 115154 ATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTC 115213 | |||||| || ||| | || || || |||||||||||||||||||| || | Sbjct 56493 ACAAGGAAACACGACGAGAGCTGGGGGTGGGGAGTACCAGCGTTGAAGAGGGTGGGGGAA 56434 Query 115214 GCGTGGATGAACATACCT-TGGGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTC 115272 ||||| |||| | || | || ||||| || ||||||||| | | || ||||| Sbjct 56433 GCGTGTGTGAAGA-ACTTCTGCGACATGAGATTGTAGGTCTCGATGGCGCTTTCGATGTC 56375 Query 115273 TTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGG 115317 || ||||| ||||| | | ||| ||||| | ||||| ||||| Sbjct 56374 CTCGCCGTGGATACCAACAGCGACACGCATGAGCATGTGCTGGGG 56330 >seq82 Length=90256 Score = 132 bits (146), Expect = 6e-26 Identities = 299/443 (67%), Gaps = 10/443 (2%) Strand=Plus/Plus Query 172576 CTTGAGGAGGGATGGCCAGAAGTAGTGGATCATATTCAGGATGAGACCCTTAATGTGTGA 172635 |||||| || || || |||||| | || | || | |||||||||||| ||||| || Sbjct 62423 CTTGAGCAGCGAAGGGTAGAAGTGATCGAGGAAGTTGATGATGAGACCCTTGATGTGCGA 62482 Query 172636 ACCATCGTTATCCGCATCCGTCATAATCATAAGCCGACCATAGCG-AAGCTCGGAAACAT 172694 |||||||| |||| ||| ||||| ||||| | | || || || ||||| | |||| Sbjct 62483 ACCATCGTGATCCTGATCGGTCATGATCATGATACTTCCGTATCGCAAGCT-GTTGACAT 62541 Query 172695 CTTGATACTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGAGATCATTGAACTCTTGGT 172754 | | |||| ||| || || || ||||| | |||| ||||| | |||| ||| | Sbjct 62542 CGAGGTACTGCTTGCCGTGCTGGAGACCGAGAATCTCCTTGATGGCCTTGATCTCGGCAT 62601 Query 172755 TTGATGTGAGTTGCGCCACTGAAGCATCGCGGACATTTTTACACTTCCCACGGAGAGGGA 172814 | ||| || | || || |||||||| || | ||| || || || || | Sbjct 62602 TCTTCATGATCTGATCGTGTGTGGCCTCGCGGACGTTGAGAAGCTTACCTCGAAGCGGAA 62661 Query 172815 ACACACCGTAGTGATCACGACCAACCACAGAAAGACCAGCAACTGCGAGGGTCTTCGCGG 172874 | ||||| ||| ||||| || || ||| | ||| | || ||||| ||||| |||| Sbjct 62662 AGACACCAAAGTTGTCACGCCCGACTTCAGCGATACCGGAGACGGCGAGCGTCTTGGCGG 62721 Query 172875 AATCACCCTCCGTCACGATGAGCGTACACTTTCCAGATTGTGCCGTC-CCCGCCTTGTTC 172933 | ||||| || || | |||||||| || | || || ||| | || || ||||| Sbjct 62722 AGTCACCTTCGGTGAGAATGAGCGTGCAGTCCTTAGCTT-TGCGACCACCAGCGTTGTTG 62780 Query 172934 GCATCGTCCAACTTGGGAATACCAGTAATTTTGG---ACTTGCGGGCACCATCTGTCTTC 172990 ||||| || | ||||||||| |||||| ||| |||| | ||| || |||||| Sbjct 62781 GCATCTTCGAGCTTGGGAATGTTCGTAATTCTGGTTCGCTTGTG---ACCGTCGGTCTTC 62837 Query 172991 TTGAGTTCCTTCATCTCCTTGAA 173013 ||||| ||| || |||||| Sbjct 62838 TTGAGGGCCTGGTCCTGCTTGAA 62860 >seq69 Length=107628 Score = 107 bits (118), Expect = 2e-18 Identities = 282/427 (66%), Gaps = 5/427 (1%) Strand=Plus/Minus Query 125791 CTTCCCGTCCAAGCTGATATTCTCCATAAAATCAAATGGGTTCTTTGAGTTCCAAATTGT 125850 ||| || | |||||||||||| |||||||| || || |||||||||||| ||| | || Sbjct 12873 CTTTCCTTGCAAGCTGATATTATCCATAAAGTCGAAGGGGTTCTTTGAG--CCATAGTGG 12816 Query 125851 T--GGCACCCCAATCTGTTTGAGGAGACGATCCGAGACGTACTCAATGTACTCAGACATC 125908 || || | ||| |||| | || || | |||||||||||||| |||| Sbjct 12815 ACCGGGTTTCCGAGCTGCGTGAGCAATCGGTCGGCCACGTACTCAATGTAGGTGCACATG 12756 Query 125909 TTCTCAGAGTTCATACCGATGAGGTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCA 125968 || | |||||| || ||||| | || | || || | ||| | |||||| Sbjct 12755 AGCTTGGCGTTCATGCCAATGAGCGAAACGGGCAATGCATCGGTCAAGAAGCTCTTCTCG 12696 Query 125969 ATTTCCACGGCTTCCCGCACGATGGCGTGAATGGTGTCCACCCCAGGTCTATTGCGCAAA 126028 || || || || || | || | ||| ||| || ||| | || | | Sbjct 12695 ATCTCTACAGCCTCGGAAATAATCTTGAGAACGGTCTCGGGAGCAGCGCGCTTCTTGAGA 12636 Query 126029 GTCTTGAAGAGTTCCACGGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCA 126088 | |||||| |||||| || ||| | ||||| ||||| |||||||| || Sbjct 12635 TGCGAGAAGAGCAAGCAGGCAAAGTCGGTGTGCATGCCCTCATCACGCGAGATGAGCTCG 12576 Query 126089 TTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAAT 126148 || ||||| || || ||||||||||| |||||||| | |||||| || | | || Sbjct 12575 TTGGAGAAAGTGAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAC 12516 Query 126149 GAACCCGAGAAGAAGATTCCCTCCACACACGCGAACGCAAAGAGACGCTCAGC-AAAGGA 126207 ||||| ||||||||||| || || || ||||| || | |||||| || || |||| Sbjct 12515 GAACCGGAGAAGAAGATACCTTCGACGGCGGCGAAAGCGACGAGACGTTCGGCAAAAGTG 12456 Query 126208 GCGCGAC 126214 ||||||| Sbjct 12455 GCGCGAC 12449 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597257724747200