Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09-
20] 12,840 sequences; 23,769,677 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq144 127 2e-24
seq33 107 2e-18
seq62 102 9e-17
seq24 87.8 2e-12
>seq144
Length=29207
Score = 127 bits (140), Expect = 2e-24
Identities = 158/211 (75%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059
||||| ||||| ||| |||||| || || ||||| || | || || || | || ||
Sbjct 8165 ACCAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTTCGGCCATCTTCC 8106
Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119
| ||| ||||||||||| ||||| ||||||||||||| || | | |||||||||| ||
Sbjct 8105 AACTGTTTACCAGCGAAGATGAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCC-TG 8047
Query 42120 ATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTT 42177
| |||| | |||| ||| | | | |||||| || ||||| |||| |||||||| |
Sbjct 8046 AATTTTGGCCTTGA-CGTTGTCAATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCT 7988
Query 42178 TGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
| || || || ||||| |||||||| |||||
Sbjct 7987 TACCGGTCAGAGTCTTGACAAAGATCTGCAT 7957
Score = 109 bits (120), Expect = 6e-19
Identities = 163/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
|||||| | ||||| | ||| | || | ||||||||||| || || ||||| || |
Sbjct 8868 ACCTCCGCGCAAACGAAGCACAAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGA 8809
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
|| || || | || || | ||||||||| || || || || ||||||||||| | ||
Sbjct 8808 AAGGGTGCGACCATCTTCCAACTGCTTACCTGCAAAGATAAGACGCTGCTGGTCAGGGGG 8749
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 42159
| || |||||||||| ||| | || | |||| | | | |||||| || || |
Sbjct 8748 GATGCCCTCCTTGTCC-TGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGA 8690
Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
| || | |||||||| || || || || ||||| ||||||||||||||
Sbjct 8689 CTTCCAATGTGATGGTCTTTCCTGTGAGTGTCTTGACAAAGATTTGCAT 8641
Score = 104 bits (114), Expect = 3e-17
Identities = 165/230 (72%), Gaps = 5/230 (2%)
Strand=Plus/Minus
Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041
||||| | | |||||| || | ||||| ||||||||||| || || ||||| || |
Sbjct 9096 CCTCCACGGAGACGCAAGACAAGGTGCAAAGTGCTCTCCTTCTGGATGTTGTAGTCCGAG 9037
Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGT-CGGCTGG 42100
|| || || |||| || | ||||||||| || || || || |||||||||| | | ||
Sbjct 9036 AGGGTGCGACCGTCTTCCAACTGCTTACCTGCAAAGATAAGACGCTGCTGGTCCAGGGGG 8977
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTCGATTCC 42158
| |||||||| | ||| | || | |||| ||| | | | ||||| ||| ||
Sbjct 8976 AATATCCTCCTTGT-CTTGAATCTTGGCCTTGA-CGTTGTCAATGGTGTCCGACGACTCA 8919
Query 42159 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| |||| ||||| || || || || |||||||| |||||||| |||||
Sbjct 8918 ACCTCGAGGGTGATCGTCTTTCCAGTGAGCGTCTTGACAAAGATCTGCAT 8869
Score = 93.3 bits (102), Expect = 5e-14
Identities = 141/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 42012 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 42071
||||||||||||||||| ||||| || | || || || |||| || || ||||| |||
Sbjct 8609 GTGCTCTCCTTTTGAATGTTGTAGTCGGAGAGTGTTCGGCCGTCCTCAAGTTGCTTTCCA 8550
Query 42072 GCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTG 42131
|| || ||||| || ||||| || | ||| | || ||||||||| ||| || ||
Sbjct 8549 GCAAAGATGAGGCGTTGCTGATCAGGTGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTT 8490
Query 42132 AGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGT 42190
| ||| | | | || || || || || |||| || ||||| ||||| || || ||
Sbjct 8489 A-CGTTGTCGATGGTATCAGAAGACTCGACCTCGAGAGTAATGGTCTTGCCTGTAAGGGT 8431
Query 42191 CTTTACAAAGATTTGCAT 42208
|| || ||||| |||||
Sbjct 8430 TTTGACGAAGATCTGCAT 8413
>seq33
Length=194022
Score = 107 bits (118), Expect = 2e-18
Identities = 143/196 (73%), Gaps = 2/196 (1%)
Strand=Plus/Minus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| || || ||||| || | || || || | || || ||||||||||| |||||
Sbjct 184306 CTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGTCCATCTTCGAGCTGCTTACCGGCGAA 184247
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
||||| |||||||| || | || | || ||||||||| ||| || |||| |||
Sbjct 184246 GATGAGACGCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGT 184188
Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195
| | | ||||| || ||||| || | |||||||| |||||||| || ||||| |
Sbjct 184187 TGTCGATGGTGTCCGAAGACTCCACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTAA 184128
Query 42196 CAAAGATTTGCATTTT 42211
||||||| ||||| ||
Sbjct 184127 CAAAGATCTGCATCTT 184112
>seq62
Length=118391
Score = 102 bits (112), Expect = 9e-17
Identities = 142/194 (73%), Gaps = 4/194 (2%)
Strand=Plus/Plus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| || || ||||| || | || || || | || || |||||||||||||| ||
Sbjct 71447 CTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCATCCTCGAGCTGCTTACCAGCAAA 71506
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135
|| || ||||||||||| | ||| | | |||||| ||| ||| | || | |||| ||
Sbjct 71507 GATAAGACGCTGCTGGTCAGGTGGGATACCCTCCTTATCC-TGAATCTTGGCCTTGA-CG 71564
Query 42136 TCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 42194
| | | | ||||| || || || |||| |||||||| ||||| || || |||||
Sbjct 71565 TTGTCAATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTG 71624
Query 42195 ACAAAGATTTGCAT 42208
|||||||| |||||
Sbjct 71625 ACAAAGATCTGCAT 71638
>seq24
Length=214592
Score = 87.8 bits (96), Expect = 2e-12
Identities = 123/170 (72%), Gaps = 2/170 (1%)
Strand=Plus/Plus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| || || ||||| || | || || || |||| || ||||||||||| |||||
Sbjct 73403 CTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTACCGGCGAA 73462
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
||||| ||||||||||||| || | | |||||||||| || | || | | | |||
Sbjct 73463 GATGAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCC-TGGATCTTGGCCTTAACGT 73521
Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTT 42185
| | | |||||| || ||||| || | |||||||| || || |||
Sbjct 73522 TGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATGGTCTTACCTGTT 73571
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543125614345600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |