Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09- 20] 12,840 sequences; 23,769,677 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq81 300 2e-76 >seq81 Length=91273 Score = 300 bits (332), Expect = 2e-76 Identities = 1171/1822 (64%), Gaps = 50/1822 (3%) Strand=Plus/Plus Query 93733 TTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGGGTTTCCGAGCGACCG 93792 ||||| || || ||| || ||||| ||| || | |||| |||| | ||||| || Sbjct 56273 TTCAAGACCCTCGAGCGATCCTACCTTCTCCGTATTAACGGCAAGGTTGCTGAGCGTCCC 56332 Query 93793 CACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGACATGCCGAATGTTTTG 93852 || || |||| ||||| ||||| | || || |||||| | ||||| |||| | Sbjct 56333 CAGCACATGCTCATGCGTGTCGCTGTTGGTATCCACGGCGAGGACAT--CGAAAGCGCCA 56390 Query 93853 -CGGG-CTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCACCCCGACCCTGTTCA 93910 || | | | || |||| | | ||| | || || |||| ||||| |||| Sbjct 56391 TCGAGACCTACAATCTCATGTCGCAGAAGTTCTTCACACACGCTTCCCCCACCCTCTTCA 56450 Query 93911 ACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAACAAGGCCGACT 93970 |||| || || || || ||| | || ||||||||||| | || | |||| |||| Sbjct 56451 ACGCTGGTACTCCCCACCCCCAGCTCTCGTCGTGTTTCCTTGTCACCATGAAGGATGACT 56510 Query 93971 CCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATACGCGGGGG 94030 | ||| ||| || | ||||| ||||||| ||| || | ||||| || ||| || | Sbjct 56511 CGATCGACGGTATCTACGACACCCTCAAGACCTGCGCCATGATCTCCAAGACCGCTGGTG 56570 Query 94031 GAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTACCAATG 94090 | ||||| ||| ||||| || | || | | || |||||||| ||||||||||| Sbjct 56571 GTATCGGTCTCAACATCCACAACATCCGAGGAACTGGCTCCTACATTGCCGGTACCAATG 56630 Query 94091 GCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCTACGTGG 94150 | | |||||| |||| || |||||||| |||||||||||| | || || ||||| | Sbjct 56631 GTGTCAGCAACGGTATCGTTCCCATGCTCCGTGTCTTCAACAACACTGCACGATACGTTG 56690 Query 94151 ACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCACGCGG 94210 ||||||||||| | | | ||| | || || |||| | ||||| |||||| ||| Sbjct 56691 ACCAGGGTGGTAACAAGCGTCCCGGTGCCTTTGCCATCTACATTGAGCCTTGGCACTCGG 56750 Query 94211 ACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGGGCCAGAG 94270 | || | ||| | ||||| || ||||||||||| || || || | ||| | | Sbjct 56751 ATGTCTTCGAGTTCCTTGACCTCCGCAAGAACCACGGTAAGGAGGAGGTACGTGCCCGTG 56810 Query 94271 ACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAAAACTCCG 94330 | ||||||||||| |||||||| || || || || ||||| | |||||| | ||| | Sbjct 56811 AGCTCTTCTACGCCCTCTGGGTTCCCGATCTCTTCATGAAGAGGGTCGAGCAGAACGGTG 56870 Query 94331 CCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTTTGTGGATCGCGTT 94390 |||| || | || || || || |||||||| || | ||| | || | | Sbjct 56871 ACTGGTCGCTCATGTGCCCTAACGAGTGTCCCGGTCTCGCTGACTGCTACGGCGAGGAGT 56930 Query 94391 TTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCA---GGAAGGTTATGGATG 94447 |||| | || | || ||||| | |||| ||| | | || | | | Sbjct 56931 TTGAGCGTCTCTACGAGCGCTACGAGGCCGAGGGTCGCTCCAAGCGCACCGTCA---AGG 56987 Query 94448 CTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGCCCTACATCT 94507 || |||||| ||| | ||| | || ||| ||||| |||| |||| |||| Sbjct 56988 CTCAGAAGCTCTGGTACGCCATCCTCGAGTCCCAGACCGAGACTGGTAACCCCTTCATCC 57047 Query 94508 TGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTGATCAAGAGCT 94567 | | ||||||| ||| |||| |||| ||||||| || ||||||| |||||| ||| Sbjct 57048 TTTACAAGGACGCTGCCAACCGCAAGAGCAACCAGAAGAACCTCGGTACCATCAAGTGCT 57107 Query 94568 CGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCTGTGTGTAACC 94627 | || || ||||| ||||| ||||||| | | | || || ||| | ||||| || ||| Sbjct 57108 CCAACCTTTGCACAGAGATCATCGAGTACAGTGCACCCGATGAGGTCGCTGTCTGCAACT 57167 Query 94628 TGGGCTCCATCAACCTGTCCACTTTCGTGCGA-GATGCCTAC-ACGTCTACTGCTTCGTT 94685 ||| || ||| || |||| ||| | ||| || | | | |||||| |||| Sbjct 57168 TGGCTTCGATCGCTCTCCCCACCTTCAT-CGACCCTGTCACCAAGGTCTACGACTTCAAG 57226 Query 94686 CGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGG--ATGGTCTTGAACCTGAACAGGGTA 94743 || | || | ||| | || |||| || | ||| |||||| | | Sbjct 57227 CGCT-TGCACGAGGT-----------CGCCAAGGCCATCTGCAAAAACTTGAACAAGATC 57274 Query 94744 ATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTGAAGCATCGGCCC 94803 ||||||| |||| |||||| ||||| ||||| || || ||| || || || ||| Sbjct 57275 ATCGACATCAACTACTACCCTGTCCCCGAGGCTCGCAAGTCCAACATGCGCCACCGACCC 57334 Query 94804 ATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGCGTCTGC-CCTACGA 94862 ||||| ||||| || |||||| | || ||||| | |||| ||| | || | | | || Sbjct 57335 ATCGGTATCGGTGTTCAGGGTCTTGCTGACGCCTTCATGATCATG-GGCTACGCTTTTGA 57393 Query 94863 CTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATTTATTACGGGGCCAT 94922 || ||| || | | || | | || ||||| | ||| || ||| || | Sbjct 57394 GTCGCCCGAGGCCCGCCGCCTCAACGTTCAGATCTTCGAGACCATCTACCACGCTGCTCT 57453 Query 94923 GAAACAATCCGTCCA-CTTGGCCAGATCGGACGGCGGGCCACACGAATCGTTCCGCGGAT 94981 | | |||| | | |||| ||| ||| ||| | |||| | | | ||| | Sbjct 57454 CGAGCGATCCTGCGAGCTTGCCCA----GGAGCACGGCACCTACGAGACCTACGCCGGTT 57509 Query 94982 CGCC--CTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCCTCGGGTCT 95039 | || ||| | ||||| | |||| |||| | |||||||| | ||||| | || Sbjct 57510 CCCCCGCTTCG--CAGGGTGAGCTCCAGTACGACATGTGGGGTGTTACACCCTCCGACCT 57567 Query 95040 GTACGACTGGG--AAGCTCTACGCGCTGATGTTATCAAACACGGTGTGAAAAACGCGCTG 95097 | ||||||| | ||| | || || || ||| |||||| | ||| |||| Sbjct 57568 CTGGGACTGGGCCAGCCTCAAGGCCAAGA--TTGCCAAGCACGGTCTTCGCAACTCGCT- 57624 Query 95098 CTTG-TGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTT 95156 |||| | || |||||||| || ||||| || ||||| || ||| |||||||| || Sbjct 57625 CTTGCTCGCTCCCATGCCTACTGCCTCGACCAGTCAGATTCTCGGCTTCAACGAGTGCTT 57684 Query 95157 CGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCAT 95216 ||| || | |||||| ||| | ||| | || || ||||| || || |||| ||| | Sbjct 57685 CGAGCCTTACACCTCGAACATCTACTCGCGCCGTGTACTCGCTGGTGAGTTCCAGGTCGT 57744 Query 95217 CAACAAGCACCTCCTACGGGACCTGACGT--CTCTGGGTGTGTGGGGTGACAAGGTCAAG 95274 |||| | || || || || ||| | ||| | ||| |||| | ||| Sbjct 57745 CAACCCTTGGTTGCTCCGTGAGCT--CGTTGAGCAAGGTCTTTGGAACGACACCATGAAG 57802 Query 95275 AACCAACTGCTACGCGC-CAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAGGACAT 95333 |||| | | ||| | | || || | |||||| | || || || || || Sbjct 57803 AACCGTAT-CATCGCTCACGGTGGTTCGATTCAGAACGTTCCCGGTATCCCTGACCGTAT 57861 Query 95334 CAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGCGTGATACTCGACCACGCGGC 95393 |||| ||||||||||||||| ||||||||| ||| | || ||||| ||||| Sbjct 57862 CAAGAAGCTCTACAAGACCGTTTGGGAGATCAGTCAGAAGGCTATCATCGACATGGCGGC 57921 Query 95394 CGCCCGCGGGCCCTTCATCTGCCAGAGNNNNNNNNNNNNNNNNNNNATGGCCGAGCCCAG 95453 || ||| || | |||||||||||| || | | || | Sbjct 57922 CGACCGTGGTGCTTTCATCTGCCAGTCGCAGTCGCTCAACATCCACTTGTCGGCACCTAC 57981 Query 95454 TCGCGGAAAAATAACGTCCATGTTGTTCTACGGGTGGAGAAAGGGTCTCAAGACCGGTAT 95513 | ||| | | || || ||| |||||||| |||| ||||||||||||||||||| Sbjct 57982 TTTCGGTCAGCTCACTTCGATGCACTTCTACGGTTGGAAGAAGGGTCTCAAGACCGGTAC 58041 Query 95514 GTATTATTTGCGAACCAGGCCA 95535 || || ||||| |||| |||| Sbjct 58042 CTACTACTTGCGTACCAAGCCA 58063 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494643796926400