Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09- 20] 12,840 sequences; 23,769,677 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq81 183 3e-41 seq144 116 4e-21 seq62 91.5 1e-13 seq24 89.7 5e-13 seq33 84.2 2e-11 >seq81 Length=91273 Score = 183 bits (202), Expect = 3e-41 Identities = 1110/1748 (64%), Gaps = 61/1748 (3%) Strand=Plus/Minus Query 152838 ATGAAAGCGTTACGGTCGGCCGCCATCTCAATCAT-GCGTTTTGCCTTCATCTCCCAGGC 152896 |||||||| ||||||||||||||| || || || || || || || |||||||| | Sbjct 57939 ATGAAAGCACCACGGTCGGCCGCCATGTCGATGATAGCCTTCTGACTG-ATCTCCCAAAC 57881 Query 152897 GGTTTTGTACAAATTTTTAACGCTATCCGGTATACCTTCAATGTTCTGAATAGAGCCCTT 152956 ||| ||||| | || || | | || || ||||| || ||||||||| || || Sbjct 57880 GGTCTTGTAGAGCTTCTTGATACGGTCAGGGATACCGGGAACGTTCTGAATCGAACCACC 57821 Query 152957 GTGTGCAAAAATAGCGTTTCGTATTTCGGGCGTGT---ACACGTTCAGTTTAATGAGGTC 153013 ||| || | ||| || ||| | | | ||| | || || | | || ||| || Sbjct 57820 GTGAGCGATGATA-CGGTTCTTCATGGTGTCGTTCCAAAGACCTT--GCTCAACGAGCTC 57764 Query 153014 ATCGATCAAGTACTGGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATAC 153073 | || ||| | ||||||| || || ||||| || || | || || | | | || | Sbjct 57763 ACGGAGCAACCAAGGGTTGACGACCTGGAACTCACCAGCGAGTACACGGCGCGAGTAGAT 57704 Query 153074 ATTGCTAGTGAAAGGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGT 153133 || ||| |||| || ||| | ||||| ||| || || ||| || | || || Sbjct 57703 GTTCGAGGTGTAAGGCTCGAAGCACTCGTTGAAGCCGAGAATCTGACTGGTCGAGGCAGT 57644 Query 153134 CGGCATGTACGCCACCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAA 153193 |||||| || | ||| | || || || | |||||| ||| | | |||| | Sbjct 57643 AGGCATGGGAGCGAGCAAGAGCGAGTTGCGAAGACCGTGCTTGGCAATCTTGGCCTTGA- 57585 Query 153194 CGCCTG--CCAATCCCACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACT 153251 | ||| ||| ||||| || | || ||||| | ||||||||||||||| | | | Sbjct 57584 -GGCTGGCCCAGTCCCAGAGGTCGGAGGGTGTAACACCCCACATGTCGTACTGGAGCTCA 57526 Query 153252 CCTCGACTGGCGGGACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCCAGTTCG 153311 || | ||||| ||||| | || |||| |||||| ||||| || ||| Sbjct 57525 CCCTGCGAAGCGGGGGAACCGGCGTAGGTCTCGTAGGTGCCGTGCTCCTGGGCAAGCTCG 57466 Query 153312 CAGCTAGCCTCGAGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCC 153371 ||| |||||| || | | ||| ||||| ||| ||| || ||||| |||| Sbjct 57465 CAGGATCGCTCGAGAGCAGCGTGGTAGATGGTCTCGAAGATCTGAACGTTGAGG-CGGCG 57407 Query 153372 G-CTTCTTCGCTCTCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGAT 153430 | | || ||| | | || || | || |||||||| || |||||||| | Sbjct 57406 GGCCTCGGGCGACTCAAAAGCGTAGCCCATGATCATGAAGGCGTCAGCAAGACCCTGAAC 57347 Query 153431 ACCGACGCCGATGGGTCGATGCTTCTCGTTGCTGCGCCTCGCG---CTCGCT-ATGGGAT 153486 ||||| ||||||||||| || | |||| | || ||| |||| | || | Sbjct 57346 ACCGATACCGATGGGTCGGTGGCGCATGTTG----GACTTGCGAGCCTCGGGGACAGGGT 57291 Query 153487 AGTGATTGCGATCGATAATTTTGTTGAGGTTGC-GCACCACCACTTTAGTTATCGCCTTA 153545 ||| ||| ||||| || ||||| | ||| ||| | | || | | | | | Sbjct 57290 AGTAGTTGATGTCGATGATCTTGTTCAAGTTTTTGCAG-ATGGCCTTGGCGACCTCGTGC 57232 Query 153546 AGTTTCTCGAAATCATAGGTCATTTCGTCGACGCGTACGCATCGATTCACG--------G 153597 | || ||| || ||| | || || ||| | ||||| | | | Sbjct 57231 AAGCGCTTGAAGTCGTAGACC--TTGGT-GACAGGG-----TCGATGAAGGTGGGGAGAG 57180 Query 153598 CAATAGACGCCAGATTACAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGG 153657 | || || |||| || ||||| || ||| |||| | ||||||| | |||||| | Sbjct 57179 CGATCGAAGCCAAGTTGCAGACAGCGACCTCATCGGGTGCACTGTACTCGATGATCTCTG 57120 Query 153658 CGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACG 153717 ||| |||||| ||| || ||| || | || | ||| ||||| ||||| ||| | Sbjct 57119 TGCAAAGGTTGGAGCACTTGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGGCAG 57060 Query 153718 CGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGATAAACCTAT 153777 |||| ||| | || ||| | || || |||||| || | |||| ||| | || Sbjct 57059 CGTCCTTGTAAAGGATGAAGGGGTTACCAGTCTCGGTCTGGGACTCGAGGATGG-CGTAC 57001 Query 153778 GC-AGGTCCTGCGCTCGCACCCGCTGCCGAT--AGCGGCCCTCGCTCTCGTATCGCTCGT 153834 || | ||| || || | ||| | |||| |||||| |||||| ||||||| Sbjct 57000 CAGAGCTTCTGAGCCTTGAC--GGTGCGCTTGGAGCGACCCTCGGCCTCGTAGCGCTCGT 56943 Query 153835 ACAGTCGCTCAAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACA 153894 | || ||||||||||| |||||||||||||| ||||| |||||||||| | || |||| Sbjct 56942 AGAGACGCTCAAACTCCTCGCCGTAGCAGTCAGCGAGACCGGGACACTCGTTAGGGCACA 56883 Query 153895 TCAGCGACCACATATCG-TCGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCAGAGC 153953 | |||||||| | || || || | ||| | |||||| ||||| || |||||||| Sbjct 56882 TGAGCGACCAGTCACCGTTCTGC-TCGACCCTCTTCATGAAGAGATCGGGAACCCAGAGG 56824 Query 153954 GCGTACATGAGGTCGCGCGC-CTTGCAATCCTCCGCGCCCATGTTGCGTTTCAGA-TTGA 154011 ||||| | ||| || || || | | | |||||| || ||| || | || | | Sbjct 56823 GCGTAGAAGAGCTCACGGGCACGTAC-CTCCTCCTTACCGTGGTT--CTTGCGGAGGTCA 56767 Query 154012 --GCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACG 154069 | || | | ||| || | |||||| || |||||||||| ||| | |||||| ||| Sbjct 56766 AGGAACTCGA-AGACATCCGAGTGCCAAGGCTCAATGTAGATGGCAAAGGCACCGGGACG 56708 Query 154070 C---TTTCCGCCCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTC 154126 | || || ||||| || |||| || | | ||||||||||| || | |||||| | Sbjct 56707 CTTGTTACCACCCTGGTCAACGTATCGTGCAGTGTTGTTGAAGACACGGAGCATGGGAAC 56648 Query 154127 CAGGCCGCTTGC-GGTGCCGTTGGTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGAT 154185 | ||| |||| | || ||||| || | | ||| | || | | | Sbjct 56647 GATACCG-TTGCTGACACCATTGGTACCGGCAATGTAGGAGCCAGTTCCTCGGATGTTGT 56589 Query 154186 GCACGTTAACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAGTCGCCCAGCGTCC 154245 | | ||| | || || || || || ||| || || |||||| || || Sbjct 56588 GGATGTTGAGACCGATACCACCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGGGTGT 56529 Query 154246 TGTAGATGCCGTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCG 154305 |||||| |||||||| || || | | || | ||||||||| | | || | Sbjct 56528 CGTAGATACCGTCGATCGAGTCATCCTTCATGGTGACAAGGAAACACGACGAGAGCTGGG 56469 Query 154306 GAATGCGCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCA 154365 | | | || || || ||||||||||| ||||| || || | || || || Sbjct 56468 GGTGGGGAGTACCAGCGTTGAAGAGGGTGGGGGAAGCGTGTGTGAAGAACTTCTGCGACA 56409 Query 154366 TCATGCGGTACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGC 154425 | | ||| || ||||||||| |||||| || |||||||| || || | ||||| | Sbjct 56408 TGAGATTGTAGGTCTCGATGGCGCTTTCGATGTCCTCGCCGTGGATACCAACAGCGACAC 56349 Query 154426 GCATGAGCATGTGCTGCGGACGTTCGGCGACTCTATTGTCAATCTTCAAGAGATATCCAT 154485 |||||||||||||||| ||||| || || || | || ||| | || || Sbjct 56348 GCATGAGCATGTGCTGGGGACGCTCAGCAACCTTGCCGTTAATACGGAGAAGGTAGGATC 56289 Query 154486 TTTCGAGGGTTTTGTAACCGAAATACTTGTATTCAAAATCTAGCTCATGAGCGATGGCCG 154545 |||||||| ||| ||||||| | ||||| | || || |||| | | ||| |||| Sbjct 56288 GCTCGAGGGTCTTGAAACCGAAGAAGTTGTAGTGGAAGTCGCGCTCGTAAATGATTGCCG 56229 Query 154546 CATCGAGC 154553 |||||| Sbjct 56228 AGTCGAGC 56221 >seq144 Length=29207 Score = 116 bits (128), Expect = 4e-21 Identities = 166/230 (72%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | || || || | | | |||||||| || ||||||||||| Sbjct 8183 CCACCACGGAGACGGAGGACCAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCCGAG 8124 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || || || | |||||||| | |||| |||||||| ||||| ||||| Sbjct 8123 AGGGTTCGGCCATCTTCCAACTGTTTACCAGCGAAGATGAGACGCTGCTGGTCGGGAGGG 8064 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 ||||| || ||||| ||| |||| | || | |||| | | |||||||| ||||||| Sbjct 8063 ATACCCTCCTTGTCC-TGAATTTTGGCCTTGACGTTGT-CAATGGTGTCGGAAGACTCCA 8006 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 |||||| || | || ||||| |||||||| || ||||| ||||||||| Sbjct 8005 CCTCGAGGGTGATGGTCTTACCGGTCAGAGTCTTGACAAAGATCTGCATG 7956 Score = 91.5 bits (100), Expect = 1e-13 Identities = 140/195 (72%), Gaps = 5/195 (3%) Strand=Plus/Minus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || ||||||||||| | || || ||| || | || ||||| | | | Sbjct 9061 CTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGACCGTCTTCCAACTGCTTACCTGCAAA 9002 Query 138483 GATTAGACGCTGTTGGTCC-GGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA-- 138539 ||| |||||||| |||||| || || ||| | || ||||| ||| | || | || | Sbjct 9001 GATAAGACGCTGCTGGTCCAGGGGGAATATCCTCCTTGTC-TTGAATCTTGGCCTTGACG 8943 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | |||||| | |||||| ||||||| || | ||| || ||||| || || || Sbjct 8942 TTG-TCAATGGTGTCCGACGACTCAACCTCGAGGGTGATCGTCTTTCCAGTGAGCGTCTT 8884 Query 138600 TACAAAAATCTGCAT 138614 ||||| |||||||| Sbjct 8883 GACAAAGATCTGCAT 8869 Score = 89.7 bits (98), Expect = 5e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||||||||||||||||||| | || || |||||| ||||| || || | | | Sbjct 8604 CTCCTTTTGAATGTTGTAGTCGGAGAGTGTTCGGCCGTCCTCAAGTTGCTTTCCAGCAAA 8545 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTG 138542 ||| || || || || || || || || ||||| ||||| ||| || |||| | Sbjct 8544 GATGAGGCGTTGCTGATCAGGTGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTT 8485 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | ||| || | ||||| ||||||| || | || || || || || ||||| || Sbjct 8484 GTCGATGGTATCAGAAGACTCGACCTCGAGAGTAATGGTCTTGCCTGTAAGGGTTTTGAC 8425 Query 138603 AAAAATCTGCAT 138614 || |||||||| Sbjct 8424 GAAGATCTGCAT 8413 >seq62 Length=118391 Score = 91.5 bits (100), Expect = 1e-13 Identities = 140/196 (71%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| | || || |||||||| || ||||| | | Sbjct 71445 GACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCATCCTCGAGCTGCTTACCAGCA 71504 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 |||| |||||||| ||||| || || ||||| || || || ||| | || | || | Sbjct 71505 AAGATAAGACGCTGCTGGTCAGGTGGGATACCCTCCTTATC-CTGAATCTTGGCCTTGAC 71563 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 ||| || | |||||| | ||||| ||||||| || | || || || || || || | Sbjct 71564 GTTG-TCAATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCT 71622 Query 138599 TTACAAAAATCTGCAT 138614 | ||||| |||||||| Sbjct 71623 TGACAAAGATCTGCAT 71638 >seq24 Length=214592 Score = 89.7 bits (98), Expect = 5e-13 Identities = 125/172 (73%), Gaps = 4/172 (2%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| | || || ||||||||| || ||||||| Sbjct 73401 GACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTACCGGCG 73460 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 |||| |||||||| ||||| || || ||||| || ||||| || | || | |||| Sbjct 73461 AAGATGAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTC-CTGGATCTTGGCCTTAAC 73519 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGT 138590 ||| || | |||||||| ||||||||||| | || | || ||||| || Sbjct 73520 GTTG-TCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATGGTCTTACCTGT 73570 >seq33 Length=194022 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| | || || || ||||| || ||||||| Sbjct 184308 GACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGTCCATCTTCGAGCTGCTTACCGGCG 184249 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| |||||||| || || || || || ||||| ||||| ||| || || | Sbjct 184248 AAGATGAGACGCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACG 184189 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | ||||||||||| | || | || || || || || || || Sbjct 184188 TTGTCGATGGTGTCCGAAGACTCCACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTA 184129 Query 138601 ACAAAAATCTGCAT 138614 ||||| |||||||| Sbjct 184128 ACAAAGATCTGCAT 184115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496182749884800