Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09-
20] 12,840 sequences; 23,769,677 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq144 104 2e-17
seq81 82.4 7e-11
seq62 82.4 7e-11
>seq144
Length=29207
Score = 104 bits (114), Expect = 2e-17
Identities = 147/204 (72%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197
|||| || || ||||| ||||| || || || || |||| ||| ||||| |||
Sbjct 8159 TGCAAGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTTCGGCCATCTTCCAACTGT 8100
Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257
|| || ||| | || | || |||||||| || || || || || || || ||||||||
Sbjct 8099 TTACCAGCGAAGATGAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGAATTTTG 8040
Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316
|||| || | || | ||||||||||||||| || ||||| || | || || |||||
Sbjct 8039 GCCTTGA-CGTTGTCAATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTACCGGT 7981
Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340
||||| || ||||| || |||||
Sbjct 7980 CAGAGTCTTGACAAAGATCTGCAT 7957
Score = 89.7 bits (98), Expect = 5e-13
Identities = 160/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || ||||| | | || || || ||||| |||||||| || || || |||
Sbjct 8642 ATACCACCACGGAGTCGGAGAACGAGGTGAAGCGTGCTCTCCTTTTGAATGTTGTAGTCG 8583
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
|| ||| || || | ||| ||||| || | || | |||||||| || ||
Sbjct 8582 GAGAGTGTTCGGCCGTCCTCAAGTTGCTTTCCAGCAAAGATGAGGCGTTGCTGATCAGGT 8523
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
||||||||||| || || || || || || | || | || | ||| || ||||||||
Sbjct 8522 GGAATGCCTTCCTTGTCCTGGATCTTGGCCTTTA-CGTTGTCGATGGTATCAGAAGACTC 8464
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||| |||||||||| || ||||| || || ||||| || || || |||||
Sbjct 8463 GACCTCGAGAGTAATGGTCTTGCCTGTAAGGGTTTTGACGAAGATCTGCAT 8413
Score = 87.8 bits (96), Expect = 2e-12
Identities = 147/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191
|| ||||| || || ||||| || ||||| || |||||| | ||| || ||
Sbjct 8393 ACGAGATGGAGGGTCGATTCTTTCTGGATGTTGTAATCGGACAAGGTGCGGCCGTCCTCA 8334
Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251
| || ||||| ||| | || | || ||||| || || ||||||||||| || || |||
Sbjct 8333 AGCTGCTTTCCGGCGAAAATGAGACGCTGCTGATCGGGAGGAATGCCTTCCTTGTCCTGA 8274
Query 45252 ATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310
|| || |||| || | || | ||||| || ||||| || |||||||||| || ||
Sbjct 8273 ATCTTGGCCTTGA-CGTTATCGATAGTGTCAGACGACTCAACCTCGAGAGTAATGGTCTT 8215
Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|||||| | || || || || || |||||
Sbjct 8214 GCCGGTCAAGGTCTTGACGAAGATCTGCAT 8185
>seq81
Length=91273
Score = 82.4 bits (90), Expect = 7e-11
Identities = 149/218 (68%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 122898 AAGGTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGC 122957
||||| || || ||| || || ||||||||||| |||||| | || | |||||
Sbjct 56315 AAGGTTGCTGAGCGTCCCCAGCACATGCTCATGCGTGTCGCTGTTGGTATCCACGGCGAG 56374
Query 122958 GACATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCG 123017
|||||||||| ||| | ||| || ||| || | ||||| || || || ||||| |||||
Sbjct 56375 GACATCGAAAGCGCCATCGAGACCTACAATCTCATGTCGCAGAAGTTCTTCACACACGCT 56434
Query 123018 AGTCCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTC 123077
||||| | ||| ||| || || || ||| | || |||||||| | ||
Sbjct 56435 TCCCCCACCCTCTTCAACGCTGGTACTCCCCACCCCCAGCTCTCGTCGTGTTTCCTTGTC 56494
Query 123078 ACCTTGCGCGAAGACAGCATCACCGGTATCTATGAAAC 123115
||| || || ||| ||| ||||||||| || ||
Sbjct 56495 ACCATGAAGGATGACTCGATCGACGGTATCTACGACAC 56532
>seq62
Length=118391
Score = 82.4 bits (90), Expect = 7e-11
Identities = 159/230 (69%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173
|| || ||||| | | || | ||| || || |||||||| ||||| || ||||| ||
Sbjct 71184 CCACCACGGAGACGGAGGACCAAATGAAGTGTGGATTCCTTCTGGATGTTGTAATC--TG 71241
Query 45174 ACGGTTTTAGAA--TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCG 45231
| | | | || || | || || || ||| | || | || ||||| || || |
Sbjct 71242 AAAGAGTGCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATCGGGAG 71301
Query 45232 GAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCG 45290
| |||||||| || || || || || |||| || | || | |||||| |||||||||
Sbjct 71302 GGATGCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCCGAAGACTCG 71360
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| ||||| | || ||||| || | ||| || ||||| || |||||
Sbjct 71361 ACTTCAAGAGTGATGGTCTTGCCAGTCAAAGTCTTGACAAAGATCTGCAT 71410
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451930653486400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |