Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09- 20] 12,840 sequences; 23,769,677 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq81 192 7e-44 seq82 141 1e-28 seq69 100 3e-16 >seq81 Length=91273 Score = 192 bits (212), Expect = 7e-44 Identities = 919/1428 (64%), Gaps = 47/1428 (3%) Strand=Plus/Minus Query 115876 AACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCA 115935 |||||||| ||||| || | | |||||||| | ||||| ||||| |||||||| Sbjct 57735 AACTCACCAGCGAGTACACGGCGCGAGTAGATGTTCGAGGTGTAAGGCTCGAAGCACTCG 57676 Query 115936 TTGTTACCCAAGATTTGGGCTG-TGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 115994 ||| | || ||| | | ||| | ||||| || |||||||| || | | || ||| Sbjct 57675 TTGA-AGCCGAGAATCTGACTGGTCGAGGCAGTAGGCATGGGAGCGAGCAAGAGCGAGTT 57617 Query 115995 GCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGA-GCTTTG 116053 ||| ||||| | ||| |||||||| | ||||||| || | | | Sbjct 57616 GCGAAGACCGTGCTTGGCAATCTTGGCCTTGAGGCTGGCCCAGTCCCAGAGGTCGGAGGG 57557 Query 116054 TCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATG 116113 | | | | ||||||| || ||||||| ||| || || || || || || | | | Sbjct 57556 TGTAACAC-CCCACATGTCGTACTGGAGCTCACCCTGCGAAGCGGGGGAACCGGCGTAGG 57498 Query 116114 TCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGC-TCGCCTCGAGGGCTGCGTGATAC 116172 |||| || | ||| | ||| || | ||| || |||| ||||| || ||||| || Sbjct 57497 TCTCGTAGGTGCCGTGCTCCTGGGCAAGCTCGCAGGATCGC-TCGAGAGCAGCGTGGTAG 57439 Query 116173 ATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCG-AGACG 116231 || ||||| || || || | || | ||||||| || ||||| ||| || | Sbjct 57438 ATGGTCTCGAAGATCTGAACGTTGAGGCGGCGGGCCTCGGGCGACTCAAAAGCGTAGCC- 57380 Query 116232 GCACAAA-ATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCA 116290 || | || || | || || ||||| || ||||||| || || || || || | || Sbjct 57379 -CATGATCATGAAGGCGTCAGCAAGACCCTGAACACCGATACCGATGGGTCGGTGGCGCA 57321 Query 116291 TATTAGACTTTCGAGCGGTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTATTTA 116347 | || ||||| ||||| ||| || || || | || | ||||| | | | || | Sbjct 57320 TGTTGGACTTGCGAGC---CTCGGGGACAGGGTAGTAGTTGATGTCGATGATCTTGTTCA 57264 Query 116348 GATTTTTGGTGACAACCTTTGTGATTTCATG-AAGCTTTTCGTAATC--AAAACTGCGAG 116404 |||||| || |||| | || || || |||| || | | || | | || | | Sbjct 57263 AGTTTTTGCAGATGGCCTTGGCGACCTCGTGCAAGCGCTT-GAAGTCGTAGACCTTGGTG 57205 Query 116405 TCTCT-TCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCA 116463 | || ||| | | || || ||||| || |||| || || |||| | |||| Sbjct 57204 ACAGGGTCGATGA---AGGTGGGGAGAGCGATCGAAGCCAAGTTGCAGACAGCGACCTCA 57148 Query 116464 TCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAG 116523 || || ||||||| || || || || || | || || | ||| ||||| || | | Sbjct 57147 TCGGGTGCACTGTACTCGATGATCTCTGTGCAAAGGTTGGAGCACTTGATGGTACCGAGG 57088 Query 116524 TTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTC 116583 ||||| || || ||| ||| || |||||||| || || | || | || ||| Sbjct 57087 TTCTTCTGGTTGCTCTTGCGGTTGGCAGCGTCCTTGTAAAGGATGAAGGGGTTACCAGTC 57028 Query 116584 TCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGGC 116642 || || ||||||| ||| || || | ||| | | || | | || | || ||| |||| Sbjct 57027 TCGGTCTGGGACTCGAGGATGGCGTACCAGAGCTTCTGAGCCTTG-ACGGTGCGCTTGGA 56969 Query 116643 TCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCC-TCTG 116701 || ||||| ||||||| |||||| ||||||||| || || ||| || | Sbjct 56968 GCGACCCTCGGCCTCGTAGCGCTCGTAGAGACGCTCAAACTCCTCGCCGT-AGCAGTCAG 56910 Query 116702 AGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCT 116761 ||| || || || | || || | ||| ||||| | ||| || ||| |||| || Sbjct 56909 CGAGACCGGGACACTCGTTAGGGCACATGAGCGACCAGTCACCGTTCTGCTCGACCCTCT 56850 Query 116762 TCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCAT 116821 |||||||||| || || | |||||| || ||||||| || || || | || || | Sbjct 56849 TCATGAAGAGATCGGGAACCCAGAGGGCGTAGAAGAGCTCACGGGCACGTACCTCCTCCT 56790 Query 116822 CCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGT 116881 || || || || | || | || || | || ||||| |||||| || || | || Sbjct 56789 TACCGTGGTTCTTGCGGAGGTCAAGGAACTCGAAGACATCCGAGTGCCAAGGCTCAATGT 56730 Query 116882 ACACCGCGATTGACCCCTTGCGACG------ACCAGCCTGGTTTACATACCTCGCCGTTG 116935 | | || | | || | |||| |||| |||||| || || | || || Sbjct 56729 AGATGGCAAAGGCACC---GGGACGCTTGTTACCACCCTGGTCAACGTATCGTGCAGTGT 56673 Query 116936 CGTTAAATACGCGAAGCATTGGAATGATACCAT--CAGATTGGCCATTTGTCCCCCGAAT 116993 ||| || || || ||||| |||| |||||| | | || ||||| || || ||| Sbjct 56672 TGTTGAAGACACGGAGCATGGGAACGATACCGTTGCTGACA--CCATTGGTACCGGCAAT 56615 Query 116994 --ACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTT 117051 | ||| | ||| ||| || | |||||||| | ||| ||||| || || ||| Sbjct 56614 GTAGGAGCCA-GTTC-CTCGGATGTTGTGGATGTTGAGACCGATACCACCAGCGGTCTTG 56557 Query 117052 GAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTT 117111 ||||| ||||| | |||| || ||||||| || |||||||||||| |||| | Sbjct 56556 GAGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATACCGTCGATCGAGTCATCCTTCATG 56497 Query 117112 GCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGT 117171 | || ||||| || ||| | || || || |||||||||||||||||||| || Sbjct 56496 GTGACAAGGAAACACGACGAGAGCTGGGGGTGGGGAGTACCAGCGTTGAAGAGGGTGGGG 56437 Query 117172 GTCGCGTGGATGAACATACCT-TGGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAAT 117230 | ||||| |||| | || | || ||||| || ||||||||| | | | || Sbjct 56436 GAAGCGTGTGTGAAGA-ACTTCTGCGACATGAGATTGTAGGTCTCGATGGCGCTTTCGAT 56378 Query 117231 GTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGTATTGGGG 117278 ||| || ||||| ||||| | | ||| ||||| | ||||| ||||| Sbjct 56377 GTCCTCGCCGTGGATACCAACAGCGACACGCATGAGCATGTGCTGGGG 56330 >seq82 Length=90256 Score = 141 bits (156), Expect = 1e-28 Identities = 301/443 (68%), Gaps = 10/443 (2%) Strand=Plus/Plus Query 176596 CTTGAGGAGGGATGGCCAGAAGTAGTGGATCATATTGAGGATGAGACCCTTAATGTGTGA 176655 |||||| || || || |||||| | || | |||| |||||||||||| ||||| || Sbjct 62423 CTTGAGCAGCGAAGGGTAGAAGTGATCGAGGAAGTTGATGATGAGACCCTTGATGTGCGA 62482 Query 176656 ACCATCGTTATCCGCATCCGTCATAATCATGAGCCGACCATAGCG-AAGCTCGGAAACAT 176714 |||||||| |||| ||| ||||| ||||||| | || || || ||||| | |||| Sbjct 62483 ACCATCGTGATCCTGATCGGTCATGATCATGATACTTCCGTATCGCAAGCT-GTTGACAT 62541 Query 176715 CTTGATAATCCTTACCTTGTTGAAGACCCAAAATCTTCTTGAGATCATTGAACTCTTGGT 176774 | | || | ||| || || || ||||| | ||||| ||||| | |||| ||| | Sbjct 62542 CGAGGTACTGCTTGCCGTGCTGGAGACCGAGAATCTCCTTGATGGCCTTGATCTCGGCAT 62601 Query 176775 TTGATGTGAGTTGCGCCACTGAAGCGTCGCGGACATTTTTACACTTCCCGCGGAGAGGGA 176834 | ||| || | || || |||||||| || | ||| || || || || | Sbjct 62602 TCTTCATGATCTGATCGTGTGTGGCCTCGCGGACGTTGAGAAGCTTACCTCGAAGCGGAA 62661 Query 176835 ACACACCGTAGTGATCACGACCAACCACAGAGAGACCAGCAACTGCGAGGGTCTTCGCGG 176894 | ||||| ||| ||||| || || ||| || ||| | || ||||| ||||| |||| Sbjct 62662 AGACACCAAAGTTGTCACGCCCGACTTCAGCGATACCGGAGACGGCGAGCGTCTTGGCGG 62721 Query 176895 AATCACCCTCCGTCACGATGAGCGTACACTTTCCAGATTGTGCCGTC-CCCGCCTTGTTC 176953 | ||||| || || | |||||||| || | || || ||| | || || ||||| Sbjct 62722 AGTCACCTTCGGTGAGAATGAGCGTGCAGTCCTTAGCTT-TGCGACCACCAGCGTTGTTG 62780 Query 176954 GCATCGTCCAACTTGGGAATACCAGTAATTTTGG---ACTTACGAGCACCATCTGTCTTC 177010 ||||| || | ||||||||| |||||| ||| ||| | ||| || |||||| Sbjct 62781 GCATCTTCGAGCTTGGGAATGTTCGTAATTCTGGTTCGCTTGTG---ACCGTCGGTCTTC 62837 Query 177011 TTGAGTTCCTTCATCTCCTTGAA 177033 ||||| ||| || |||||| Sbjct 62838 TTGAGGGCCTGGTCCTGCTTGAA 62860 >seq69 Length=107628 Score = 100 bits (110), Expect = 3e-16 Identities = 117/158 (74%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 ||||| || ||| | ||||| ||||| |||||||| || || ||||| ||||| Sbjct 12617 GCAAAGTCGGTGTGCATGCCCTCATCACGCGAGATGAGCTCGTTGGAGAAAGTGAGACCG 12558 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639 ||||||||||| |||||||| | |||||| || | | || || || ||||||||||| Sbjct 12557 GGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAACGAACCGGAGAAGAAGATA 12498 Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAA 127677 || || || ||||| || | ||||| |||||||| Sbjct 12497 CCTTCGACGGCGGCGAAAGCGACGAGACGTTCGGCAAA 12460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613408732094400