Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09-
20] 12,840 sequences; 23,769,677 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq81 192 7e-44
seq82 141 1e-28
seq69 100 3e-16
>seq81
Length=91273
Score = 192 bits (212), Expect = 7e-44
Identities = 919/1428 (64%), Gaps = 47/1428 (3%)
Strand=Plus/Minus
Query 115876 AACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCA 115935
|||||||| ||||| || | | |||||||| | ||||| ||||| ||||||||
Sbjct 57735 AACTCACCAGCGAGTACACGGCGCGAGTAGATGTTCGAGGTGTAAGGCTCGAAGCACTCG 57676
Query 115936 TTGTTACCCAAGATTTGGGCTG-TGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 115994
||| | || ||| | | ||| | ||||| || |||||||| || | | || |||
Sbjct 57675 TTGA-AGCCGAGAATCTGACTGGTCGAGGCAGTAGGCATGGGAGCGAGCAAGAGCGAGTT 57617
Query 115995 GCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGA-GCTTTG 116053
||| ||||| | ||| |||||||| | ||||||| || | | |
Sbjct 57616 GCGAAGACCGTGCTTGGCAATCTTGGCCTTGAGGCTGGCCCAGTCCCAGAGGTCGGAGGG 57557
Query 116054 TCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATG 116113
| | | | ||||||| || ||||||| ||| || || || || || || | | |
Sbjct 57556 TGTAACAC-CCCACATGTCGTACTGGAGCTCACCCTGCGAAGCGGGGGAACCGGCGTAGG 57498
Query 116114 TCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGC-TCGCCTCGAGGGCTGCGTGATAC 116172
|||| || | ||| | ||| || | ||| || |||| ||||| || ||||| ||
Sbjct 57497 TCTCGTAGGTGCCGTGCTCCTGGGCAAGCTCGCAGGATCGC-TCGAGAGCAGCGTGGTAG 57439
Query 116173 ATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCG-AGACG 116231
|| ||||| || || || | || | ||||||| || ||||| ||| || |
Sbjct 57438 ATGGTCTCGAAGATCTGAACGTTGAGGCGGCGGGCCTCGGGCGACTCAAAAGCGTAGCC- 57380
Query 116232 GCACAAA-ATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCA 116290
|| | || || | || || ||||| || ||||||| || || || || || | ||
Sbjct 57379 -CATGATCATGAAGGCGTCAGCAAGACCCTGAACACCGATACCGATGGGTCGGTGGCGCA 57321
Query 116291 TATTAGACTTTCGAGCGGTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTATTTA 116347
| || ||||| ||||| ||| || || || | || | ||||| | | | || |
Sbjct 57320 TGTTGGACTTGCGAGC---CTCGGGGACAGGGTAGTAGTTGATGTCGATGATCTTGTTCA 57264
Query 116348 GATTTTTGGTGACAACCTTTGTGATTTCATG-AAGCTTTTCGTAATC--AAAACTGCGAG 116404
|||||| || |||| | || || || |||| || | | || | | || | |
Sbjct 57263 AGTTTTTGCAGATGGCCTTGGCGACCTCGTGCAAGCGCTT-GAAGTCGTAGACCTTGGTG 57205
Query 116405 TCTCT-TCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCA 116463
| || ||| | | || || ||||| || |||| || || |||| | ||||
Sbjct 57204 ACAGGGTCGATGA---AGGTGGGGAGAGCGATCGAAGCCAAGTTGCAGACAGCGACCTCA 57148
Query 116464 TCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAG 116523
|| || ||||||| || || || || || | || || | ||| ||||| || | |
Sbjct 57147 TCGGGTGCACTGTACTCGATGATCTCTGTGCAAAGGTTGGAGCACTTGATGGTACCGAGG 57088
Query 116524 TTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTC 116583
||||| || || ||| ||| || |||||||| || || | || | || |||
Sbjct 57087 TTCTTCTGGTTGCTCTTGCGGTTGGCAGCGTCCTTGTAAAGGATGAAGGGGTTACCAGTC 57028
Query 116584 TCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGGC 116642
|| || ||||||| ||| || || | ||| | | || | | || | || ||| ||||
Sbjct 57027 TCGGTCTGGGACTCGAGGATGGCGTACCAGAGCTTCTGAGCCTTG-ACGGTGCGCTTGGA 56969
Query 116643 TCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCC-TCTG 116701
|| ||||| ||||||| |||||| ||||||||| || || ||| || |
Sbjct 56968 GCGACCCTCGGCCTCGTAGCGCTCGTAGAGACGCTCAAACTCCTCGCCGT-AGCAGTCAG 56910
Query 116702 AGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCT 116761
||| || || || | || || | ||| ||||| | ||| || ||| |||| ||
Sbjct 56909 CGAGACCGGGACACTCGTTAGGGCACATGAGCGACCAGTCACCGTTCTGCTCGACCCTCT 56850
Query 116762 TCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCAT 116821
|||||||||| || || | |||||| || ||||||| || || || | || || |
Sbjct 56849 TCATGAAGAGATCGGGAACCCAGAGGGCGTAGAAGAGCTCACGGGCACGTACCTCCTCCT 56790
Query 116822 CCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGT 116881
|| || || || | || | || || | || ||||| |||||| || || | ||
Sbjct 56789 TACCGTGGTTCTTGCGGAGGTCAAGGAACTCGAAGACATCCGAGTGCCAAGGCTCAATGT 56730
Query 116882 ACACCGCGATTGACCCCTTGCGACG------ACCAGCCTGGTTTACATACCTCGCCGTTG 116935
| | || | | || | |||| |||| |||||| || || | || ||
Sbjct 56729 AGATGGCAAAGGCACC---GGGACGCTTGTTACCACCCTGGTCAACGTATCGTGCAGTGT 56673
Query 116936 CGTTAAATACGCGAAGCATTGGAATGATACCAT--CAGATTGGCCATTTGTCCCCCGAAT 116993
||| || || || ||||| |||| |||||| | | || ||||| || || |||
Sbjct 56672 TGTTGAAGACACGGAGCATGGGAACGATACCGTTGCTGACA--CCATTGGTACCGGCAAT 56615
Query 116994 --ACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTT 117051
| ||| | ||| ||| || | |||||||| | ||| ||||| || || |||
Sbjct 56614 GTAGGAGCCA-GTTC-CTCGGATGTTGTGGATGTTGAGACCGATACCACCAGCGGTCTTG 56557
Query 117052 GAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTT 117111
||||| ||||| | |||| || ||||||| || |||||||||||| |||| |
Sbjct 56556 GAGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATACCGTCGATCGAGTCATCCTTCATG 56497
Query 117112 GCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGT 117171
| || ||||| || ||| | || || || |||||||||||||||||||| ||
Sbjct 56496 GTGACAAGGAAACACGACGAGAGCTGGGGGTGGGGAGTACCAGCGTTGAAGAGGGTGGGG 56437
Query 117172 GTCGCGTGGATGAACATACCT-TGGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAAT 117230
| ||||| |||| | || | || ||||| || ||||||||| | | | ||
Sbjct 56436 GAAGCGTGTGTGAAGA-ACTTCTGCGACATGAGATTGTAGGTCTCGATGGCGCTTTCGAT 56378
Query 117231 GTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGTATTGGGG 117278
||| || ||||| ||||| | | ||| ||||| | ||||| |||||
Sbjct 56377 GTCCTCGCCGTGGATACCAACAGCGACACGCATGAGCATGTGCTGGGG 56330
>seq82
Length=90256
Score = 141 bits (156), Expect = 1e-28
Identities = 301/443 (68%), Gaps = 10/443 (2%)
Strand=Plus/Plus
Query 176596 CTTGAGGAGGGATGGCCAGAAGTAGTGGATCATATTGAGGATGAGACCCTTAATGTGTGA 176655
|||||| || || || |||||| | || | |||| |||||||||||| ||||| ||
Sbjct 62423 CTTGAGCAGCGAAGGGTAGAAGTGATCGAGGAAGTTGATGATGAGACCCTTGATGTGCGA 62482
Query 176656 ACCATCGTTATCCGCATCCGTCATAATCATGAGCCGACCATAGCG-AAGCTCGGAAACAT 176714
|||||||| |||| ||| ||||| ||||||| | || || || ||||| | ||||
Sbjct 62483 ACCATCGTGATCCTGATCGGTCATGATCATGATACTTCCGTATCGCAAGCT-GTTGACAT 62541
Query 176715 CTTGATAATCCTTACCTTGTTGAAGACCCAAAATCTTCTTGAGATCATTGAACTCTTGGT 176774
| | || | ||| || || || ||||| | ||||| ||||| | |||| ||| |
Sbjct 62542 CGAGGTACTGCTTGCCGTGCTGGAGACCGAGAATCTCCTTGATGGCCTTGATCTCGGCAT 62601
Query 176775 TTGATGTGAGTTGCGCCACTGAAGCGTCGCGGACATTTTTACACTTCCCGCGGAGAGGGA 176834
| ||| || | || || |||||||| || | ||| || || || || |
Sbjct 62602 TCTTCATGATCTGATCGTGTGTGGCCTCGCGGACGTTGAGAAGCTTACCTCGAAGCGGAA 62661
Query 176835 ACACACCGTAGTGATCACGACCAACCACAGAGAGACCAGCAACTGCGAGGGTCTTCGCGG 176894
| ||||| ||| ||||| || || ||| || ||| | || ||||| ||||| ||||
Sbjct 62662 AGACACCAAAGTTGTCACGCCCGACTTCAGCGATACCGGAGACGGCGAGCGTCTTGGCGG 62721
Query 176895 AATCACCCTCCGTCACGATGAGCGTACACTTTCCAGATTGTGCCGTC-CCCGCCTTGTTC 176953
| ||||| || || | |||||||| || | || || ||| | || || |||||
Sbjct 62722 AGTCACCTTCGGTGAGAATGAGCGTGCAGTCCTTAGCTT-TGCGACCACCAGCGTTGTTG 62780
Query 176954 GCATCGTCCAACTTGGGAATACCAGTAATTTTGG---ACTTACGAGCACCATCTGTCTTC 177010
||||| || | ||||||||| |||||| ||| ||| | ||| || ||||||
Sbjct 62781 GCATCTTCGAGCTTGGGAATGTTCGTAATTCTGGTTCGCTTGTG---ACCGTCGGTCTTC 62837
Query 177011 TTGAGTTCCTTCATCTCCTTGAA 177033
||||| ||| || ||||||
Sbjct 62838 TTGAGGGCCTGGTCCTGCTTGAA 62860
>seq69
Length=107628
Score = 100 bits (110), Expect = 3e-16
Identities = 117/158 (74%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579
||||| || ||| | ||||| ||||| |||||||| || || ||||| |||||
Sbjct 12617 GCAAAGTCGGTGTGCATGCCCTCATCACGCGAGATGAGCTCGTTGGAGAAAGTGAGACCG 12558
Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639
||||||||||| |||||||| | |||||| || | | || || || |||||||||||
Sbjct 12557 GGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAACGAACCGGAGAAGAAGATA 12498
Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAA 127677
|| || || ||||| || | ||||| ||||||||
Sbjct 12497 CCTTCGACGGCGGCGAAAGCGACGAGACGTTCGGCAAA 12460
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613408732094400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |