Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09- 20] 12,840 sequences; 23,769,677 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq33 143 6e-29 seq144 120 7e-22 seq62 120 7e-22 seq24 118 2e-21 seq11049 104 6e-17 seq309 102 2e-16 seq4095 86.0 1e-11 >seq33 Length=194022 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| || ||||||||||| |||| ||||||||| | | || | ||||||| Sbjct 184326 AGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGTCCATCT 184267 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| ||||||||||||||||||||||| || || ||| ||||| ||| Sbjct 184266 TCGAGCTGCTTACCGGCGAAGATGAGACGCTGCTGATCAGGGGGAATGCCTTCCTTGTCC 184207 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| |||||| | | || || || | ||||| ||| Sbjct 184206 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCAAGGGTGATGGTC 184147 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || || || ||||| || || Sbjct 184146 TTGCCCGTAAGGGTCTTAACAAAGATCTG 184118 >seq144 Length=29207 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||| | || |||||||| |||| ||||||||| | | || | |||||| Sbjct 8168 AGGACCAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTTCGGCCATCT 8109 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||| ||| || || ||||||||||||||||||||||| ||| || || || ||| Sbjct 8108 TCCAACTGTTTACCAGCGAAGATGAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCC 8049 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 ||||| || ||| ||| || | |||||| | | || || || | ||||| ||| Sbjct 8048 TGAATTTTGGCCTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTC 7989 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || ||||| || ||||| || || Sbjct 7988 TTACCGGTCAGAGTCTTGACAAAGATCTG 7960 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || |||||||| ||||| |||||| |||| ||||||||| | | || | |||||| Sbjct 8852 AGCACAAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGACCATCT 8793 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||| |||||| || || ||||| |||||||||||||| || || || || ||| Sbjct 8792 TCCAACTGCTTACCTGCAAAGATAAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 8733 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| || || | ||||| | | || || ||||| ||||| ||| Sbjct 8732 TGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACTTCCAATGTGATGGTC 8673 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || ||||| ||||| Sbjct 8672 TTTCCTGTGAGTGTCTTGACAAAGATTTG 8644 Score = 116 bits (128), Expect = 9e-21 Identities = 159/220 (72%), Gaps = 3/220 (1%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | || ||||||||| | ||| |||||| |||| ||||||||| | | || Sbjct 9090 CGGAGACGCAAGACAAGGTGCAAAGTGCTCTCCTTCTGGATGTTGTAGTCCGAGAGGGTG 9031 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCC--GGAAAAATTC 199526 | || ||||||| |||||| || || ||||| ||||||||||||||| || || || Sbjct 9030 CGACCGTCTTCCAACTGCTTACCTGCAAAGATAAGACGCTGCTGGTCCAGGGGGAATATC 8971 Query 199527 CTTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCA 199586 || || | || |||||||| ||| ||| || | |||||| | | || || || | Sbjct 8970 CTCCTTG-TCTTGAATCTTGGCCTTGACGTTGTCAATGGTGTCCGACGACTCAACCTCGA 8912 Query 199587 ACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||||||||| || ||||| || || ||||| || || Sbjct 8911 GGGTGATCGTCTTTCCAGTGAGCGTCTTGACAAAGATCTG 8872 Score = 114 bits (126), Expect = 3e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || || ||||| ||||| || || |||| |||||| || | ||| || Sbjct 8405 CGAAGACGGAGAACGAGATGGAGGGTCGATTCTTTCTGGATGTTGTAATCGGACAAGGTG 8346 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || || ||||||||||||||||| |||||||||||||| || ||| ||| ||| Sbjct 8345 CGGCCGTCCTCAAGCTGCTTTCCGGCGAAAATGAGACGCTGCTGATCGGGAGGAATGCCT 8286 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||||||||| ||| ||| |||| ||||| | | || || || | Sbjct 8285 TCCTTGTCCTGAATCTTGGCCTTGACGTTATCGATAGTGTCAGACGACTCAACCTCGAGA 8226 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || | || || || || || || Sbjct 8225 GTAATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTG 8188 >seq62 Length=118391 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| ||||| |||||||| |||| ||||||||| | | || | ||||| Sbjct 71427 AGGACGAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCATCC 71486 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || || ||||| |||||||||||||| || || || || ||| Sbjct 71487 TCGAGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCAGGTGGGATACCCTCCTTATCC 71546 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| ||| || | |||||| | | || || || | ||||| ||| Sbjct 71547 TGAATCTTGGCCTTGACGTTGTCAATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTC 71606 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || ||||| || || Sbjct 71607 TTGCCGGTGAGGGTCTTGACAAAGATCTG 71635 Score = 111 bits (122), Expect = 4e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | || || || || ||||| |||| |||||| || | | ||| | || ||| Sbjct 71199 AGGACCAAATGAAGTGTGGATTCCTTCTGGATGTTGTAATCTGAAAGAGTGCGGCCGTCT 71258 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| |||||||||||||| |||||||| || ||| || ||||| ||| Sbjct 71259 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATCGGGAGGGATGCCTTCCTTGTCC 71318 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| |||||| | | || || || | ||||| ||| Sbjct 71319 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAAGACTCGACTTCAAGAGTGATGGTC 71378 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || | ||| || ||||| || || Sbjct 71379 TTGCCAGTCAAAGTCTTGACAAAGATCTG 71407 >seq24 Length=214592 Score = 118 bits (130), Expect = 2e-21 Identities = 139/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| || ||||||||||| |||| ||||||||| | | || | || || Sbjct 73383 AGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCC 73442 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| |||||||||||||||||||||||||| || || || || ||| Sbjct 73443 TCGAGCTGCTTACCGGCGAAGATGAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCC 73502 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| |||||| | | || || || | ||||| ||| Sbjct 73503 TGGATCTTGGCCTTAACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATGGTC 73562 Query 199598 TTACCCGT 199605 ||||| || Sbjct 73563 TTACCTGT 73570 >seq11049 Length=215 Score = 104 bits (114), Expect = 6e-17 Identities = 89/110 (81%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||||| || |||||||| || ||||||||||| |||| ||||||||| | | || Sbjct 117 CGAAGTCGCAACACAAGGTGAAGTGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTG 58 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 | || ||||| |||||||| || || |||||||||||||||||||| || Sbjct 57 CGGCCGTCTTCAAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCAGG 8 >seq309 Length=892 Score = 102 bits (112), Expect = 2e-16 Identities = 130/174 (75%), Gaps = 20/174 (11%) Strand=Plus/Plus Query 43091 CCTTTTAGTCTCTGAACCTTT---TCTTCTTTCGAAGAA---CTTGGCTGCGGATTGTCC 43144 || ||||||||||||||||| |||| || | |||| |||||||||||||||||| Sbjct 560 CCATTTAGTCTCTGAACCTTCCACTCTTTTTGCAAAGAGAGGCTTGGCTGCGGATTGTCC 619 Query 43145 AATCCTCAACATTTTTACCATACCC-ACGCCATTACGCT--TGGTGCA-----ACTCTTT 43196 |||| | | |||||||||||||| | ||||||| || || |||| | ||| Sbjct 620 AATCTCTAGCGTTTTTACCATACCCGAGGCCATTAACCTGGTGCTGCACCCCTAATCTCA 679 Query 43197 CGA----GAAGCGGTAGTTGAGGCTCTAAGGAGTTTCCCGCAATTTGAGGATGT 43246 ||| | ||||||| | |||||||||||||||||||||||| |||||| Sbjct 680 CGATGGGGCCGCGGTAGCTAGAGCTCTAAGGAGTTTCCCGCAATTT--GGATGT 731 >seq4095 Length=282 Score = 86.0 bits (94), Expect = 1e-11 Identities = 69/81 (85%), Gaps = 2/81 (2%) Strand=Plus/Minus Query 43091 CCTTTTAGTCTCTGAACCTTTT-CTTCTTTCGAAGAA-CTTGGCTGCGGATTGTCCAATC 43148 || ||||||||||||||||| |||||| |||||| |||||||||||||||||||||| Sbjct 88 CCATTTAGTCTCTGAACCTTCCACTTCTTGCGAAGAGGCTTGGCTGCGGATTGTCCAATC 29 Query 43149 CTCAACATTTTTACCATACCC 43169 | | |||||||||||||| Sbjct 28 TCTAGCGTTTTTACCATACCC 8 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178727652660280