Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09-
20] 12,840 sequences; 23,769,677 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq33 143 6e-29
seq144 120 7e-22
seq62 120 7e-22
seq24 118 2e-21
seq11049 104 6e-17
seq309 102 2e-16
seq4095 86.0 1e-11
>seq33
Length=194022
Score = 143 bits (158), Expect = 6e-29
Identities = 157/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || ||||| || ||||||||||| |||| ||||||||| | | || | |||||||
Sbjct 184326 AGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGTCCATCT 184267
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| |||||||| ||||||||||||||||||||||| || || ||| ||||| |||
Sbjct 184266 TCGAGCTGCTTACCGGCGAAGATGAGACGCTGCTGATCAGGGGGAATGCCTTCCTTGTCC 184207
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| ||| |||| |||||| | | || || || | ||||| |||
Sbjct 184206 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCAAGGGTGATGGTC 184147
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| ||||| || || || ||||| || ||
Sbjct 184146 TTGCCCGTAAGGGTCTTAACAAAGATCTG 184118
>seq144
Length=29207
Score = 120 bits (132), Expect = 7e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| | ||| | || |||||||| |||| ||||||||| | | || | ||||||
Sbjct 8168 AGGACCAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTTCGGCCATCT 8109
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|||| ||| || || ||||||||||||||||||||||| ||| || || || |||
Sbjct 8108 TCCAACTGTTTACCAGCGAAGATGAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCC 8049
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
||||| || ||| ||| || | |||||| | | || || || | ||||| |||
Sbjct 8048 TGAATTTTGGCCTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTC 7989
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| || ||||| || ||||| || ||
Sbjct 7988 TTACCGGTCAGAGTCTTGACAAAGATCTG 7960
Score = 120 bits (132), Expect = 7e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| |||||||| ||||| |||||| |||| ||||||||| | | || | ||||||
Sbjct 8852 AGCACAAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGACCATCT 8793
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|||| |||||| || || ||||| |||||||||||||| || || || || |||
Sbjct 8792 TCCAACTGCTTACCTGCAAAGATAAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 8733
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|||||||| ||| || || | ||||| | | || || ||||| ||||| |||
Sbjct 8732 TGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACTTCCAATGTGATGGTC 8673
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || ||||| || || ||||| |||||
Sbjct 8672 TTTCCTGTGAGTGTCTTGACAAAGATTTG 8644
Score = 116 bits (128), Expect = 9e-21
Identities = 159/220 (72%), Gaps = 3/220 (1%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|| || | || ||||||||| | ||| |||||| |||| ||||||||| | | ||
Sbjct 9090 CGGAGACGCAAGACAAGGTGCAAAGTGCTCTCCTTCTGGATGTTGTAGTCCGAGAGGGTG 9031
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCC--GGAAAAATTC 199526
| || ||||||| |||||| || || ||||| ||||||||||||||| || || ||
Sbjct 9030 CGACCGTCTTCCAACTGCTTACCTGCAAAGATAAGACGCTGCTGGTCCAGGGGGAATATC 8971
Query 199527 CTTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCA 199586
|| || | || |||||||| ||| ||| || | |||||| | | || || || |
Sbjct 8970 CTCCTTG-TCTTGAATCTTGGCCTTGACGTTGTCAATGGTGTCCGACGACTCAACCTCGA 8912
Query 199587 ACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||||||||| || ||||| || || ||||| || ||
Sbjct 8911 GGGTGATCGTCTTTCCAGTGAGCGTCTTGACAAAGATCTG 8872
Score = 114 bits (126), Expect = 3e-20
Identities = 156/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | || || || ||||| ||||| || || |||| |||||| || | ||| ||
Sbjct 8405 CGAAGACGGAGAACGAGATGGAGGGTCGATTCTTTCTGGATGTTGTAATCGGACAAGGTG 8346
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| || || || ||||||||||||||||| |||||||||||||| || ||| ||| |||
Sbjct 8345 CGGCCGTCCTCAAGCTGCTTTCCGGCGAAAATGAGACGCTGCTGATCGGGAGGAATGCCT 8286
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||||||||| ||| ||| |||| ||||| | | || || || |
Sbjct 8285 TCCTTGTCCTGAATCTTGGCCTTGACGTTATCGATAGTGTCAGACGACTCAACCTCGAGA 8226
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || ||||| || || | || || || || || ||
Sbjct 8225 GTAATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTG 8188
>seq62
Length=118391
Score = 120 bits (132), Expect = 7e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| ||||| ||||| |||||||| |||| ||||||||| | | || | |||||
Sbjct 71427 AGGACGAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCATCC 71486
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| |||||||| || || ||||| |||||||||||||| || || || || |||
Sbjct 71487 TCGAGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCAGGTGGGATACCCTCCTTATCC 71546
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|||||||| ||| ||| || | |||||| | | || || || | ||||| |||
Sbjct 71547 TGAATCTTGGCCTTGACGTTGTCAATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTC 71606
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || ||||| || || ||||| || ||
Sbjct 71607 TTGCCGGTGAGGGTCTTGACAAAGATCTG 71635
Score = 111 bits (122), Expect = 4e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| | || || || || ||||| |||| |||||| || | | ||| | || |||
Sbjct 71199 AGGACCAAATGAAGTGTGGATTCCTTCTGGATGTTGTAATCTGAAAGAGTGCGGCCGTCT 71258
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| |||||||| |||||||||||||| |||||||| || ||| || ||||| |||
Sbjct 71259 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATCGGGAGGGATGCCTTCCTTGTCC 71318
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| ||| |||| |||||| | | || || || | ||||| |||
Sbjct 71319 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAAGACTCGACTTCAAGAGTGATGGTC 71378
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || | ||| || ||||| || ||
Sbjct 71379 TTGCCAGTCAAAGTCTTGACAAAGATCTG 71407
>seq24
Length=214592
Score = 118 bits (130), Expect = 2e-21
Identities = 139/188 (74%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| ||||| || ||||||||||| |||| ||||||||| | | || | || ||
Sbjct 73383 AGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCC 73442
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| |||||||| |||||||||||||||||||||||||| || || || || |||
Sbjct 73443 TCGAGCTGCTTACCGGCGAAGATGAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCC 73502
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| ||| |||| |||||| | | || || || | ||||| |||
Sbjct 73503 TGGATCTTGGCCTTAACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATGGTC 73562
Query 199598 TTACCCGT 199605
||||| ||
Sbjct 73563 TTACCTGT 73570
>seq11049
Length=215
Score = 104 bits (114), Expect = 6e-17
Identities = 89/110 (81%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||||| || |||||||| || ||||||||||| |||| ||||||||| | | ||
Sbjct 117 CGAAGTCGCAACACAAGGTGAAGTGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTG 58
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518
| || ||||| |||||||| || || |||||||||||||||||||| ||
Sbjct 57 CGGCCGTCTTCAAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCAGG 8
>seq309
Length=892
Score = 102 bits (112), Expect = 2e-16
Identities = 130/174 (75%), Gaps = 20/174 (11%)
Strand=Plus/Plus
Query 43091 CCTTTTAGTCTCTGAACCTTT---TCTTCTTTCGAAGAA---CTTGGCTGCGGATTGTCC 43144
|| ||||||||||||||||| |||| || | |||| ||||||||||||||||||
Sbjct 560 CCATTTAGTCTCTGAACCTTCCACTCTTTTTGCAAAGAGAGGCTTGGCTGCGGATTGTCC 619
Query 43145 AATCCTCAACATTTTTACCATACCC-ACGCCATTACGCT--TGGTGCA-----ACTCTTT 43196
|||| | | |||||||||||||| | ||||||| || || |||| | |||
Sbjct 620 AATCTCTAGCGTTTTTACCATACCCGAGGCCATTAACCTGGTGCTGCACCCCTAATCTCA 679
Query 43197 CGA----GAAGCGGTAGTTGAGGCTCTAAGGAGTTTCCCGCAATTTGAGGATGT 43246
||| | ||||||| | |||||||||||||||||||||||| ||||||
Sbjct 680 CGATGGGGCCGCGGTAGCTAGAGCTCTAAGGAGTTTCCCGCAATTT--GGATGT 731
>seq4095
Length=282
Score = 86.0 bits (94), Expect = 1e-11
Identities = 69/81 (85%), Gaps = 2/81 (2%)
Strand=Plus/Minus
Query 43091 CCTTTTAGTCTCTGAACCTTTT-CTTCTTTCGAAGAA-CTTGGCTGCGGATTGTCCAATC 43148
|| ||||||||||||||||| |||||| |||||| ||||||||||||||||||||||
Sbjct 88 CCATTTAGTCTCTGAACCTTCCACTTCTTGCGAAGAGGCTTGGCTGCGGATTGTCCAATC 29
Query 43149 CTCAACATTTTTACCATACCC 43169
| | ||||||||||||||
Sbjct 28 TCTAGCGTTTTTACCATACCC 8
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178727652660280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |