Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09-
20] 12,840 sequences; 23,769,677 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq69 297 2e-75
seq144 123 2e-23
seq33 114 1e-20
seq24 111 2e-19
seq62 109 5e-19
>seq69
Length=107628
Score = 297 bits (328), Expect = 2e-75
Identities = 407/566 (72%), Gaps = 7/566 (1%)
Strand=Plus/Minus
Query 132879 ATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTC 132938
|||| ||| | |||||| ||||||||| |||| |||||| || | || ||||| ||
Sbjct 12636 ATGCGAGAAGAGCAAGCAGGCAAAGTCGGTGTGCATGCCCTCATCACGCGAGATGAGCTC 12577
Query 132939 GTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAA 132998
|||| |||||| | ||||||||||| || || || |||||||| || |||| |||||
Sbjct 12576 GTTGGAGAAAGTGAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAA 12517
Query 132999 ACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGT 133058
|| || ||||||| || |||||||| |||||||| || || || ||| | || ||
Sbjct 12516 CGAACCGGAGAAGAAGATACCTTCGACGGCGGCGAAAGCGACGAGACGTTCGGCAAAAGT 12457
Query 133059 GGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCAT 133118
||| | | |||||| || || ||||| ||||| |||| |||||| || ||
Sbjct 12456 GGCGCGACGGTCCGAGATCCAACGAAGAGCCCAGTCGGCTTTTTGCTTGACGACGGGGAT 12397
Query 133119 CGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGC--ACGTAGGTGTCG 133176
|| |||| ||||| || | | | | | || | || ||| | ||||||||||
Sbjct 12396 GGTCTCGACGGCGTCGAAGAG--GAACTCGCGCTGCTCGGGTTCGCGGATGTAGGTGTCG 12339
Query 133177 ATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAG 133236
|||||| || || |||| ||||| | ||||||||| ||| || || ||||| |||
Sbjct 12338 ATGAGGAGGGAGTAGGTTTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAG 12279
Query 133237 CACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACG 133296
|| || || ||| | | || ||||| | ||| |||||||| ||||| ||||| |||
Sbjct 12278 CAGCGAGCTTCGGCGGCTTGGACTTCAGAGGAGAATCGCTCGACGAGATTCTCGTTAACG 12219
Query 133297 ATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCG 133356
|| |||||| |||||||| ||||| || ||||| |||||| || ||||||||||||
Sbjct 12218 ATACCGTCGGAAGCGGCGAAGAAGGCAAGGACGTGAGAGATGAAGTGACGCTCGTTGTCG 12159
Query 133357 TT---CAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAA 133413
|| | | ||||| ||| | |||||||| ||||| | ||| ||| |||||||
Sbjct 12158 TTGAGCTTGTTGTCCCAATCGTGAAGATCCTTGGAAAGGTCGATCTCTTCGGCGGTCCAG 12099
Query 133414 AACGACGCCTCGGCTTTTTTGTACAT 133439
|| || || ||||| || ||||||||
Sbjct 12098 AAGGAGGCTTCGGCCTTCTTGTACAT 12073
>seq144
Length=29207
Score = 123 bits (136), Expect = 2e-23
Identities = 159/217 (73%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || || || || || ||||||||| |||| || ||| | ||
Sbjct 7957 ATGCAGATCTTTGTCAAGACTCTGACCGGTAAGACCATCACCCTCGAGGTGGAGTCTTCC 8016
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | ||||| | ||||| ||||| || || |||||||
Sbjct 8017 GACACCATTGACAACG-TCAAGGCCAAAATTCAGGACAAGGAGGGTATCCCTCCCGACCA 8075
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| ||||| | ||| || |||||| |||| || | || |||||| ||||||||
Sbjct 8076 GCAGCGTCTCATCTTCGCTGGTAAACAGTTGGAAGATGGCCGAACCCTCTCGGACTACAA 8135
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|||||| ||||| | || |||| ||||| || |||
Sbjct 8136 CATCCAGAAGGAGTCCACCTTGCACTTGGTCCTCCGT 8172
Score = 105 bits (116), Expect = 7e-18
Identities = 164/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| || || || || ||||| || || |||||||| | || |||||| || |
Sbjct 8641 ATGCAAATCTTTGTCAAGACACTCACAGGAAAGACCATCACATTGGAAGTCGAGTCCTCG 8700
Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | || || | | || | || || | ||||| ||||| || ||| | |||||
Sbjct 8701 GACACGATTGACAATG-TCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCCCCTGACCA 8759
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| || || | || || || ||| |||| || | |||||||| ||||||||
Sbjct 8760 GCAGCGTCTTATCTTTGCAGGTAAGCAGTTGGAAGATGGTCGCACCCTTTCGGACTACAA 8819
Query 38423 CATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||| ||||| ||| || || || | ||||| |||||| | || ||
Sbjct 8820 CATCCAGAAGGAGAGC-ACTCTTCACCTTGTGCTTCGTTTGCGCGGAGG 8867
Score = 100 bits (110), Expect = 3e-16
Identities = 154/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || | || ||||| ||||| || |||| || ||| | |
Sbjct 8185 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATTACTCTCGAGGTTGAGTCGTCT 8244
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | |||| | || | || || | ||||| || || ||||| |||| ||
Sbjct 8245 GACACTATCGATAACG-TCAAGGCCAAGATTCAGGACAAGGAAGGCATTCCTCCCGATCA 8303
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| ||||||| ||| || || ||||| || |||| |||||| | ||| |||||
Sbjct 8304 GCAGCGTCTCATTTTCGCCGGAAAGCAGCTTGAGGACGGCCGCACCTTGTCCGATTACAA 8363
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|||||| || ||| |||| || ||| | || || |||
Sbjct 8364 CATCCAGAAAGAATCGACCCTCCATCTCGTTCTCCGT 8400
Score = 98.7 bits (108), Expect = 1e-15
Identities = 140/193 (73%), Gaps = 3/193 (2%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || |||||||| || || || |||||| |||| || ||| | |
Sbjct 8869 ATGCAGATCTTTGTCAAGACGCTCACTGGAAAGACGATCACCCTCGAGGTTGAGTCGTCG 8928
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG-ACC 38361
|||| | | | |||| | || | || || | ||||| |||| |||||| | | |||
Sbjct 8929 GACACCATTGACAACG-TCAAGGCCAAGATTCAAGACAAGGAGGATATTCCCCCTGGACC 8987
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
| ||||| || || | || || || ||| |||| |||| ||||||||| |||||||
Sbjct 8988 AGCAGCGTCTTATCTTTGCAGGTAAGCAGTTGGAAGACGGTCGCACCCTCTCGGACTACA 9047
Query 38422 ACATCCAAAAGGA 38434
||||||| |||||
Sbjct 9048 ACATCCAGAAGGA 9060
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/205 (72%), Gaps = 4/205 (2%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| ||||| || || ||||| ||||| || |||| |||||| | |
Sbjct 8413 ATGCAGATCTTCGTCAAAACCCTTACAGGCAAGACCATTACTCTCGAGGTCGAGTCTTCT 8472
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|| | | | | |||| | || | || |||| ||||| || || ||||| | || ||
Sbjct 8473 GATACCATCGACAACG-TAAAGGCCAAGATCCAGGACAAGGAAGGCATTCCACCTGATCA 8531
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|| || ||||| | || || || || || || |||| || || ||| |||||||||
Sbjct 8532 GCAACGCCTCATCTTTGCTGGAAAGCAACTTGAGGACGGCCGAACACTCTCCGACTACAA 8591
Query 38423 CATCCAAAAGGA-AGCGACGCTGCA 38446
||| |||||||| ||| ||||| ||
Sbjct 8592 CATTCAAAAGGAGAGC-ACGCTTCA 8615
>seq33
Length=194022
Score = 114 bits (126), Expect = 1e-20
Identities = 159/220 (72%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 38240 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299
||| ||||| || || || || || || |||||||| ||||||||| | || || ||| |
Sbjct 184111 AAAGATGCAGATCTTTGTTAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTGGAGTC 184170
Query 38300 CACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG 38358
| |||| | | | |||| | || | || |||| ||||| || || |||||| | |
Sbjct 184171 TTCGGACACCATCGACAACG-TCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTG 184229
Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418
| || ||||| ||||| | ||| || || ||||| || || | |||||||| ||||
Sbjct 184230 ATCAGCAGCGTCTCATCTTCGCCGGTAAGCAGCTCGAAGATGGACGCACCCTTTCGGACT 184289
Query 38419 ACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
|||||||||| ||||| |||| || || | ||||| ||
Sbjct 184290 ACAACATCCAGAAGGAGTCGACCCTTCACCTCGTGCTCCG 184329
>seq24
Length=214592
Score = 111 bits (122), Expect = 2e-19
Identities = 142/193 (74%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 38268 ACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAAGA 38326
|| || || ||||||||| | || || ||| | |||||| | | | |||| |||| |
Sbjct 73570 ACAGGTAAGACCATCACCCTTGAGGTGGAGTCTTCCGACACCATCGACAACG-TTAAGGC 73512
Query 38327 AAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAA 38386
|| |||| ||||| ||||| || ||| ||||||| ||||| ||||| | ||| || ||
Sbjct 73511 CAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGTCTCATCTTCGCCGGTAA 73452
Query 38387 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCA 38446
||||| || |||| |||||||| |||||||||||||| ||||| |||| || ||
Sbjct 73451 GCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCGACCCTTCA 73392
Query 38447 TTTGGTGCTGCGT 38459
| || || |||
Sbjct 73391 CCTCGTCCTCCGT 73379
>seq62
Length=118391
Score = 109 bits (120), Expect = 5e-19
Identities = 156/217 (72%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || | || ||||| |||||||| | || |||||| | |
Sbjct 71410 ATGCAGATCTTTGTCAAGACTTTGACTGGCAAGACCATCACTCTTGAAGTCGAGTCTTCG 71351
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || |||| ||||| || || || || |||| ||
Sbjct 71350 GACACCATCGACAACG-TCAAGGCCAAGATCCAGGACAAGGAAGGCATCCCTCCCGATCA 71292
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| ||||| | ||| ||||| ||||| || |||| ||||| || || |||||
Sbjct 71291 GCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAAGACGGCCGCACTCTTTCAGATTACAA 71232
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|||||| |||||| | || || |||||||| || |||
Sbjct 71231 CATCCAGAAGGAATCCACACTTCATTTGGTCCTCCGT 71195
Score = 100 bits (110), Expect = 3e-16
Identities = 139/192 (72%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || ||||| ||||| ||||||||| |||| || ||| || |
Sbjct 71638 ATGCAGATCTTTGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTTGAGTCCTCG 71579
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || || | || || ||||| || || | |||||
Sbjct 71578 GACACCATTGACAACG-TCAAGGCCAAGATTCAGGATAAGGAGGGTATCCCACCTGACCA 71520
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| || || | || || || ||||| || || | ||||||||| ||||||||
Sbjct 71519 GCAGCGTCTTATCTTTGCTGGTAAGCAGCTCGAGGATGGCCGCACCCTCTCGGACTACAA 71460
Query 38423 CATCCAAAAGGA 38434
|||||| |||||
Sbjct 71459 CATCCAGAAGGA 71448
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500092522265600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |