Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09- 20] 12,840 sequences; 23,769,677 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq107 412 4e-110 seq10 156 5e-33 seq74 114 2e-20 >seq107 Length=66046 Score = 412 bits (456), Expect = 4e-110 Identities = 777/1137 (68%), Gaps = 8/1137 (1%) Strand=Plus/Minus Query 7022 ATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTC 7081 |||||||| ||||| | || ||||| || || |||||||||||||| |||| || || Sbjct 46201 ATGGCGGCCTGGACGGCGGCACCGTAAGCAACAGCCTCATCGGGGTTGATCGACTTGTTG 46142 Query 7082 AGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGAT 7141 || || ||||| || | || | | | | |||| || ||||| || || || Sbjct 46141 AGCTCACGGCCGTTGAAGAAGTCGGTGAGGAGCTTCTGAACCTTGGGGATACGGGTAGAA 46082 Query 7142 CCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTT 7201 |||||||| | ||||| || | || || |||||||| ||||| || || Sbjct 46081 CCACCGACAAGGACGATCTCGTGGACGGAACCCTTGTCGATCTTGGAGTCACGGAGGACC 46022 Query 7202 TTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCA 7261 || ||||| || || || | ||| | ||| || || ||||| ||||| ||| Sbjct 46021 TTCTCGACGGGCTCGATGGTGTGGGAGAAGAGGTCACCGCAGAGCTCCTCGAAACGAGCA 45962 Query 7262 CGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTT 7321 ||||| ||||| || ||||| || | || ||| | | ||| || || || ||||| || Sbjct 45961 CGGGTGATGGAGGTGTAGAAGTCGATACCCTCGAAGAGCGAGTCGATCTCGATGGTGGTC 45902 Query 7322 TGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGG 7381 || || | |||||| | || ||||| || |||||||| || || || | |||||||||| Sbjct 45901 TGGGCAGCCGAAGAGAGGGTACGCTTGGCACGCTCACAGGCAGTGCGGAGACGACGAAGG 45842 Query 7382 GCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGT 7441 ||||| | ||| || | || ||||| | || || || ||||| | |||||| Sbjct 45841 GCACGAGCGTTGGTGGTCAAGTCCTTCTTGTTCTTGCGCTTGAACTCCTGGACGAAGTGG 45782 Query 7442 CGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTG 7501 | ||| | ||||| || |||||||||||||| || || || ||||| || ||| Sbjct 45781 TTGACGAGACGGTTGTCGAAGTCCTCACCACCCAAGTGAGTGTCACCGGCGGTGGCCTTG 45722 Query 7502 ACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGG 7561 || || |||||||| | || ||| | | | ||| ||||| || ||||| || || || Sbjct 45721 ACCTCGAAGATACCCTCCTCGATGGTAAGGAGCGAGACATCGAAGGTACCTCCTCCGAGA 45662 Query 7562 TCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCC 7621 || || ||||| |||||| | || | || ||||| ||||||||||| ||||| || Sbjct 45661 TCGAAGATGAGAACGTTCTTCTCACCCTCGGACTTCTTGTCGAGACCGTAAGCGATGGCG 45602 Query 7622 GCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCT 7681 || || || || || || || ||||| | | ||| || || | || | | ||||| Sbjct 45601 GCGGCGGTGGGCTCGTTGATGATACGCATAACGTTGAGACCCGAGATGATACCGGCATCC 45542 Query 7682 TTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTG 7741 || || || || || ||||| ||||| ||||| || ||||| || ||||| |||||| || Sbjct 45541 TTGGTAGCCTGACGCTGCGAGTCGTTGAAGTAAGCGGGGACAGTGACGACGGCGTCCTTG 45482 Query 7742 ACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTG-GTAAGAACCATCGATGA 7800 || | ||| || || | || ||| | || ||| ||| | ||| | ||| || || Sbjct 45481 ACGGTTCCACCAAGGTAAGCCTCAGCGGTCTCACGCATCTTGAGCAAG-ATCATGGAAGA 45423 Query 7801 AATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTT 7860 | ||| || | | || ||| | ||||| ||| | || | | | | |||| | Sbjct 45422 GACCTCCTCGGGGGTGAAAGTCTTCTTCTCACCCTTATACTCGA-TGCGGACCTGGGGCT 45364 Query 7861 ATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTG 7920 | || | ||| | | |||| | | ||| | ||||| ||| || |||| Sbjct 45363 TGC--CACCGACGGAGGTGACCTCGAAAGGCCAGTGCTTCATGTCGGACTGAACCTCGGC 45306 Query 7921 GTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCAT 7980 ||| ||||| | || ||||||||||| ||||| || || ||||| | ||||||||| Sbjct 45305 GTCGTCGAACTTGCGGCCAATAAGACGCTTAGCATCGAAGACAGTGTTGTGGGGGTTCAT 45246 Query 7981 GGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGAC 8040 ||| |||||||| || || || ||||| ||||| || || || || ||||| Sbjct 45245 GGCGACCTGGTTCTTGGCGGCATCACCGATGAGACGCTC---CGAGTCGGTGAAGGCGAC 45189 Query 8041 GTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTG 8100 ||| || ||||| || || || || |||||||| || || | || || ||||| ||||| Sbjct 45188 GTATGAAGGGGTGGTGCGGTTACCCTGGTCGTTGGCGATGACCTCGACACGGTCATTTTG 45129 Query 8101 CCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGATTGCTTGAGTCAT 8157 ||||||| |||| || || || || || || | ||| |||||||| || | |||||| Sbjct 45128 CCAGACGGCGACACAAGAGTAGGTAGTACCAAGATCGATACCGATGGCCTTAGTCAT 45072 >seq10 Length=323400 Score = 156 bits (172), Expect = 5e-33 Identities = 456/696 (66%), Gaps = 26/696 (4%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || || |||||||| | ||| || || || ||||| || || ||||||| ||| Sbjct 210125 TCAAAGTCCTCACCACCAAGGTGAGTGTCACCAGCGGTAGCAAGCACCTCAAAGACACCA 210066 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || || | | ||||||||| || ||||| || || || ||| | | || | Sbjct 210065 GAGTCGATCGAGAGAAGCGAAACATCGAAGGTACCTCCTCCAAGATCATAGACGATGATC 210006 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 | | ||| |||| || ||| ||||||||||| ||||| || || || || || || Sbjct 210005 TGGGACTCGCCGTCCTT---CTTGTCGAGACCGTAAGCGATGGCGGCGGCGGTGGGCTCG 209949 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || | ||||| ||| ||| || || ||||| || | || || || || || || || Sbjct 209948 TTGACGATACGGAGAACGTTGAGACCGGCAATGGTACCGGCGTCCTTGGTAGCCTGACGC 209889 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || | ||||| ||||| || ||||| || ||||| |||| ||||| || | || || Sbjct 209888 TGGGCGTCGTTGAAGTAAGCGGGGACGGTAACGACGGCGTGGGTGACCTTGTGGCCAAGG 209829 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 || | || ||| | || ||||| || ||||||||| | |||| ||| || | | Sbjct 209828 TAAGCCTCAGCGGTCTCCTTCATCTTCTGAAGAACCATGGCGGAAACCTCCTCGGGAGTG 209769 Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTT---ATCCGCAGCACCG 7873 || ||| | || ||||| | ||| | || ||| || || | || || Sbjct 209768 AAGACCTTCTTGTCGCCGTTGACGGTAACCTGGATAGCGGGCTTGCCATTCTTCTCAACG 209709 Query 7874 GGGATAACCTTATACGACCAAT-CTTTCATATCGTCTT--GGACCTGTTGGTCCGAAAAC 7930 | ||| | | | | | ||| | |||| || | | | || || Sbjct 209708 ------AGCTTGAAGGGCAAGTGCTTGGCGTCCTTCTTGAGGTCAGACTCGCCC---CAC 209658 Query 7931 TTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGG 7990 || | || || |||||||| || || || | ||||||| ||||||| || | ||| Sbjct 209657 TTGCGGCCAATGAGACGCTTAGCGTCGAAGATGGTGTTTTCGGGGTTCTGAGCAGCCTGG 209598 Query 7991 TTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGG 8050 ||||| || ||||| |||| |||||| || || || ||||||||||| ||| Sbjct 209597 TTCTTGGCGGCGTCACCGACAAGACGCTC------CGGGGTGAAAGCGACGTACGAAGGG 209544 Query 8051 GTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGA-CGCC 8109 || | || || ||||| ||||| | || ||||| || ||| || || || || |||| Sbjct 209543 GTAATACGGTTTCCTTGATCGTTGGTGATGATTTCGACACGGCCG-TTGACCTGAGCGCC 209485 Query 8110 GACGCACGAATACGTTGTTCCTAAATCAATACCGAT 8145 ||| ||||| || |||||||| | ||| ||||| || Sbjct 209484 GACACACGAGTAGGTTGTTCCAAGATCGATACCAAT 209449 >seq74 Length=100486 Score = 114 bits (126), Expect = 2e-20 Identities = 153/212 (72%), Gaps = 3/212 (1%) Strand=Plus/Minus Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996 |||||||||||||| || || || || || | |||||||||||| | |||||||| Sbjct 24931 CCGATAAGACGCTTGGCGTCGAAGACGGTCTGGCGGGGGTTCATGGCGGCCTGGTTCTTG 24872 Query 7997 GCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTT 8056 || || || ||||| ||||| || | || || || |||||||| || ||||| || Sbjct 24871 GCGGCATCACCGATGAGACGCTC---GCTCTCGGTGAAAGCGACGTAAGAGGGGGTGGTA 24815 Query 8057 CGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCAC 8116 || || || |||||||| || || || || ||||| ||||| ||| ||||| || Sbjct 24814 CGGTTACCCTGGTCGTTGGCGATGATCTCAACGCGCTCGTTGACCCACCAACCGACACAA 24755 Query 8117 GAATACGTTGTTCCTAAATCAATACCGATTGC 8148 || || || || || | || |||||||| || Sbjct 24754 GAGTAGGTGGTACCAAGGTCGATACCGATGGC 24723 Score = 109 bits (120), Expect = 7e-19 Identities = 270/409 (66%), Gaps = 8/409 (2%) Strand=Plus/Minus Query 7247 TCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCA 7306 ||||| ||||| |||||||| ||| | | ||| || || || | | | | ||| || Sbjct 25984 TCCTCGAAACGGGCACGGGTGATGTTGGCCTGGAAGTCGACACCCTGGAAGAGCGAGTCG 25925 Query 7307 ATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTT 7366 | || | ||| || || | ||| || | || ||||| || |||||||| || | Sbjct 25924 ACCTCGACGGTGGTCTGGGTGACCGACGAGAGAGTGCGCTTGGCACGCTCACAGGCGGAA 25865 Query 7367 CGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAAC 7426 || | |||||||| |||||| |||| | || || || ||| | || || | ||| Sbjct 25864 CGGAGACGACGAACGGCACGGGGGTCGTCCGAGATGTCGAGCTTGTTCTTGCGCTCGAAC 25805 Query 7427 TCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCC 7486 || | |||||| |||||| ||||| || |||||||| | ||| || || Sbjct 25804 TCCTTCTTGAAGTGGTCAAGGAGAGCGTTGTCGAAGTCCTCACCACCAAGGTGGGTGTCA 25745 Query 7487 CCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAAC 7546 || ||||| || ||||| | || | ||| || ||||| | | ||| ||||| || Sbjct 25744 CCAGCGGTGGCCTTGACGGCGAAAACACCACCGGTGATGTTAAGGAGCGAGACATCGAAG 25685 Query 7547 GTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATC----GTCGTCTTTGTTCTTATC 7602 || || || || || || | ||||| |||||| | || | | ||| | || Sbjct 25684 GTTCCTCCTCCGAGATCGTAGATGAGGACGTTCTTCTCAGTGGAGGACTTGGAG----TC 25629 Query 7603 GAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGA 7651 ||||||||| ||||| || || || || || || || || ||||| ||| Sbjct 25628 GAGACCGTAAGCGATGGCGGCGGCGGTGGGCTCGTTGATGATACGGAGA 25580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635030861185600