Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09-
20] 12,840 sequences; 23,769,677 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq107 412 4e-110
seq10 156 5e-33
seq74 114 2e-20
>seq107
Length=66046
Score = 412 bits (456), Expect = 4e-110
Identities = 777/1137 (68%), Gaps = 8/1137 (1%)
Strand=Plus/Minus
Query 7022 ATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTC 7081
|||||||| ||||| | || ||||| || || |||||||||||||| |||| || ||
Sbjct 46201 ATGGCGGCCTGGACGGCGGCACCGTAAGCAACAGCCTCATCGGGGTTGATCGACTTGTTG 46142
Query 7082 AGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGAT 7141
|| || ||||| || | || | | | | |||| || ||||| || || ||
Sbjct 46141 AGCTCACGGCCGTTGAAGAAGTCGGTGAGGAGCTTCTGAACCTTGGGGATACGGGTAGAA 46082
Query 7142 CCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTT 7201
|||||||| | ||||| || | || || |||||||| ||||| || ||
Sbjct 46081 CCACCGACAAGGACGATCTCGTGGACGGAACCCTTGTCGATCTTGGAGTCACGGAGGACC 46022
Query 7202 TTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCA 7261
|| ||||| || || || | ||| | ||| || || ||||| ||||| |||
Sbjct 46021 TTCTCGACGGGCTCGATGGTGTGGGAGAAGAGGTCACCGCAGAGCTCCTCGAAACGAGCA 45962
Query 7262 CGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTT 7321
||||| ||||| || ||||| || | || ||| | | ||| || || || ||||| ||
Sbjct 45961 CGGGTGATGGAGGTGTAGAAGTCGATACCCTCGAAGAGCGAGTCGATCTCGATGGTGGTC 45902
Query 7322 TGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGG 7381
|| || | |||||| | || ||||| || |||||||| || || || | ||||||||||
Sbjct 45901 TGGGCAGCCGAAGAGAGGGTACGCTTGGCACGCTCACAGGCAGTGCGGAGACGACGAAGG 45842
Query 7382 GCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGT 7441
||||| | ||| || | || ||||| | || || || ||||| | ||||||
Sbjct 45841 GCACGAGCGTTGGTGGTCAAGTCCTTCTTGTTCTTGCGCTTGAACTCCTGGACGAAGTGG 45782
Query 7442 CGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTG 7501
| ||| | ||||| || |||||||||||||| || || || ||||| || |||
Sbjct 45781 TTGACGAGACGGTTGTCGAAGTCCTCACCACCCAAGTGAGTGTCACCGGCGGTGGCCTTG 45722
Query 7502 ACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGG 7561
|| || |||||||| | || ||| | | | ||| ||||| || ||||| || || ||
Sbjct 45721 ACCTCGAAGATACCCTCCTCGATGGTAAGGAGCGAGACATCGAAGGTACCTCCTCCGAGA 45662
Query 7562 TCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCC 7621
|| || ||||| |||||| | || | || ||||| ||||||||||| ||||| ||
Sbjct 45661 TCGAAGATGAGAACGTTCTTCTCACCCTCGGACTTCTTGTCGAGACCGTAAGCGATGGCG 45602
Query 7622 GCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCT 7681
|| || || || || || || ||||| | | ||| || || | || | | |||||
Sbjct 45601 GCGGCGGTGGGCTCGTTGATGATACGCATAACGTTGAGACCCGAGATGATACCGGCATCC 45542
Query 7682 TTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTG 7741
|| || || || || ||||| ||||| ||||| || ||||| || ||||| |||||| ||
Sbjct 45541 TTGGTAGCCTGACGCTGCGAGTCGTTGAAGTAAGCGGGGACAGTGACGACGGCGTCCTTG 45482
Query 7742 ACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTG-GTAAGAACCATCGATGA 7800
|| | ||| || || | || ||| | || ||| ||| | ||| | ||| || ||
Sbjct 45481 ACGGTTCCACCAAGGTAAGCCTCAGCGGTCTCACGCATCTTGAGCAAG-ATCATGGAAGA 45423
Query 7801 AATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTT 7860
| ||| || | | || ||| | ||||| ||| | || | | | | |||| |
Sbjct 45422 GACCTCCTCGGGGGTGAAAGTCTTCTTCTCACCCTTATACTCGA-TGCGGACCTGGGGCT 45364
Query 7861 ATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTG 7920
| || | ||| | | |||| | | ||| | ||||| ||| || ||||
Sbjct 45363 TGC--CACCGACGGAGGTGACCTCGAAAGGCCAGTGCTTCATGTCGGACTGAACCTCGGC 45306
Query 7921 GTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCAT 7980
||| ||||| | || ||||||||||| ||||| || || ||||| | |||||||||
Sbjct 45305 GTCGTCGAACTTGCGGCCAATAAGACGCTTAGCATCGAAGACAGTGTTGTGGGGGTTCAT 45246
Query 7981 GGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGAC 8040
||| |||||||| || || || ||||| ||||| || || || || |||||
Sbjct 45245 GGCGACCTGGTTCTTGGCGGCATCACCGATGAGACGCTC---CGAGTCGGTGAAGGCGAC 45189
Query 8041 GTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTG 8100
||| || ||||| || || || || |||||||| || || | || || ||||| |||||
Sbjct 45188 GTATGAAGGGGTGGTGCGGTTACCCTGGTCGTTGGCGATGACCTCGACACGGTCATTTTG 45129
Query 8101 CCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGATTGCTTGAGTCAT 8157
||||||| |||| || || || || || || | ||| |||||||| || | ||||||
Sbjct 45128 CCAGACGGCGACACAAGAGTAGGTAGTACCAAGATCGATACCGATGGCCTTAGTCAT 45072
>seq10
Length=323400
Score = 156 bits (172), Expect = 5e-33
Identities = 456/696 (66%), Gaps = 26/696 (4%)
Strand=Plus/Minus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
|| || || |||||||| | ||| || || || ||||| || || ||||||| |||
Sbjct 210125 TCAAAGTCCTCACCACCAAGGTGAGTGTCACCAGCGGTAGCAAGCACCTCAAAGACACCA 210066
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
|| || | | ||||||||| || ||||| || || || ||| | | || |
Sbjct 210065 GAGTCGATCGAGAGAAGCGAAACATCGAAGGTACCTCCTCCAAGATCATAGACGATGATC 210006
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
| | ||| |||| || ||| ||||||||||| ||||| || || || || || ||
Sbjct 210005 TGGGACTCGCCGTCCTT---CTTGTCGAGACCGTAAGCGATGGCGGCGGCGGTGGGCTCG 209949
Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696
|| | ||||| ||| ||| || || ||||| || | || || || || || || ||
Sbjct 209948 TTGACGATACGGAGAACGTTGAGACCGGCAATGGTACCGGCGTCCTTGGTAGCCTGACGC 209889
Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756
|| | ||||| ||||| || ||||| || ||||| |||| ||||| || | || ||
Sbjct 209888 TGGGCGTCGTTGAAGTAAGCGGGGACGGTAACGACGGCGTGGGTGACCTTGTGGCCAAGG 209829
Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816
|| | || ||| | || ||||| || ||||||||| | |||| ||| || | |
Sbjct 209828 TAAGCCTCAGCGGTCTCCTTCATCTTCTGAAGAACCATGGCGGAAACCTCCTCGGGAGTG 209769
Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTT---ATCCGCAGCACCG 7873
|| ||| | || ||||| | ||| | || ||| || || | || ||
Sbjct 209768 AAGACCTTCTTGTCGCCGTTGACGGTAACCTGGATAGCGGGCTTGCCATTCTTCTCAACG 209709
Query 7874 GGGATAACCTTATACGACCAAT-CTTTCATATCGTCTT--GGACCTGTTGGTCCGAAAAC 7930
| ||| | | | | | ||| | |||| || | | | || ||
Sbjct 209708 ------AGCTTGAAGGGCAAGTGCTTGGCGTCCTTCTTGAGGTCAGACTCGCCC---CAC 209658
Query 7931 TTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGG 7990
|| | || || |||||||| || || || | ||||||| ||||||| || | |||
Sbjct 209657 TTGCGGCCAATGAGACGCTTAGCGTCGAAGATGGTGTTTTCGGGGTTCTGAGCAGCCTGG 209598
Query 7991 TTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGG 8050
||||| || ||||| |||| |||||| || || || ||||||||||| |||
Sbjct 209597 TTCTTGGCGGCGTCACCGACAAGACGCTC------CGGGGTGAAAGCGACGTACGAAGGG 209544
Query 8051 GTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGA-CGCC 8109
|| | || || ||||| ||||| | || ||||| || ||| || || || || ||||
Sbjct 209543 GTAATACGGTTTCCTTGATCGTTGGTGATGATTTCGACACGGCCG-TTGACCTGAGCGCC 209485
Query 8110 GACGCACGAATACGTTGTTCCTAAATCAATACCGAT 8145
||| ||||| || |||||||| | ||| ||||| ||
Sbjct 209484 GACACACGAGTAGGTTGTTCCAAGATCGATACCAAT 209449
>seq74
Length=100486
Score = 114 bits (126), Expect = 2e-20
Identities = 153/212 (72%), Gaps = 3/212 (1%)
Strand=Plus/Minus
Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996
|||||||||||||| || || || || || | |||||||||||| | ||||||||
Sbjct 24931 CCGATAAGACGCTTGGCGTCGAAGACGGTCTGGCGGGGGTTCATGGCGGCCTGGTTCTTG 24872
Query 7997 GCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTT 8056
|| || || ||||| ||||| || | || || || |||||||| || ||||| ||
Sbjct 24871 GCGGCATCACCGATGAGACGCTC---GCTCTCGGTGAAAGCGACGTAAGAGGGGGTGGTA 24815
Query 8057 CGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCAC 8116
|| || || |||||||| || || || || ||||| ||||| ||| ||||| ||
Sbjct 24814 CGGTTACCCTGGTCGTTGGCGATGATCTCAACGCGCTCGTTGACCCACCAACCGACACAA 24755
Query 8117 GAATACGTTGTTCCTAAATCAATACCGATTGC 8148
|| || || || || | || |||||||| ||
Sbjct 24754 GAGTAGGTGGTACCAAGGTCGATACCGATGGC 24723
Score = 109 bits (120), Expect = 7e-19
Identities = 270/409 (66%), Gaps = 8/409 (2%)
Strand=Plus/Minus
Query 7247 TCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCA 7306
||||| ||||| |||||||| ||| | | ||| || || || | | | | ||| ||
Sbjct 25984 TCCTCGAAACGGGCACGGGTGATGTTGGCCTGGAAGTCGACACCCTGGAAGAGCGAGTCG 25925
Query 7307 ATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTT 7366
| || | ||| || || | ||| || | || ||||| || |||||||| || |
Sbjct 25924 ACCTCGACGGTGGTCTGGGTGACCGACGAGAGAGTGCGCTTGGCACGCTCACAGGCGGAA 25865
Query 7367 CGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAAC 7426
|| | |||||||| |||||| |||| | || || || ||| | || || | |||
Sbjct 25864 CGGAGACGACGAACGGCACGGGGGTCGTCCGAGATGTCGAGCTTGTTCTTGCGCTCGAAC 25805
Query 7427 TCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCC 7486
|| | |||||| |||||| ||||| || |||||||| | ||| || ||
Sbjct 25804 TCCTTCTTGAAGTGGTCAAGGAGAGCGTTGTCGAAGTCCTCACCACCAAGGTGGGTGTCA 25745
Query 7487 CCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAAC 7546
|| ||||| || ||||| | || | ||| || ||||| | | ||| ||||| ||
Sbjct 25744 CCAGCGGTGGCCTTGACGGCGAAAACACCACCGGTGATGTTAAGGAGCGAGACATCGAAG 25685
Query 7547 GTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATC----GTCGTCTTTGTTCTTATC 7602
|| || || || || || | ||||| |||||| | || | | ||| | ||
Sbjct 25684 GTTCCTCCTCCGAGATCGTAGATGAGGACGTTCTTCTCAGTGGAGGACTTGGAG----TC 25629
Query 7603 GAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGA 7651
||||||||| ||||| || || || || || || || || ||||| |||
Sbjct 25628 GAGACCGTAAGCGATGGCGGCGGCGGTGGGCTCGTTGATGATACGGAGA 25580
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635030861185600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |