Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09- 20] 12,840 sequences; 23,769,677 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq81 306 5e-78 seq69 118 1e-21 seq82 116 5e-21 >seq81 Length=91273 Score = 306 bits (338), Expect = 5e-78 Identities = 1136/1742 (65%), Gaps = 69/1742 (4%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 || ||| ||||| ||||||| ||||| | |||||||| || || || || || | Sbjct 56330 CCCCAGCACATGCTCATGCGTGTCGCTGTTGGTATCCACGGCGAGGACATCGAAAGCGCC 56389 Query 111672 TTGGAGACATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCTT 111730 | ||||| ||| | ||||| | | || | |||| ||||| | || |||||||| Sbjct 56390 ATCGAGACCTACAATCTCATGTCGCAGAAGT-TCTTCACACACGCTTCCCCCACCCTCTT 56448 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790 |||||||||||| || ||||| | || ||||||||| | | | ||||| || Sbjct 56449 CAACGCTGGTACTCCCCACCCCCAGCTCTCGTCGTGTTTCCTTGTCACCATGAAGGATGA 56508 Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850 || ||| | || || |||| ||| |||| || ||| ||||| ||| ||||| Sbjct 56509 CTCGATCGACGGTATCTACGACACCCTCAAGACCTGCGCCATGATCTCCAAGACCGCTGG 56568 Query 111851 TGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAGAGGTACA 111908 ||||||||| | ||||||| | || ||| ||| | ||| || || ||||| Sbjct 56569 TGGTATCGGTCTCAACATCCACAACATCCGAGG-AACTGG-CTCCTACATTGCCGGTACC 56626 Query 111909 AATGGTCAATCAG--ATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 111966 |||||| |||| | ||||| |||| ||||| || || || ||| ||| || || | Sbjct 56627 AATGGTG--TCAGCAACGGTATCGTTCCCATGCTCCGTGTCTTCAACAACACTGCACGAT 56684 Query 111967 ATGTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCAT 112020 | || |||| | ||| ||||| | || | | || |||| ||||||| | Sbjct 56685 ACGTTGACCAGGGTGGTAACAAGCGTCCC---GGTGCCTTTGCCATCTACATTGAGCCTT 56741 Query 112021 GGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGC 112080 ||||| ||||| || | ||||||||||| | || ||||| ||| | ||||||| | Sbjct 56742 GGCACTCGGATGTCTTCGAGTTCCTTGACCTCCGCAAGAACCACGGTAAGGAGGAGGTAC 56801 Query 112081 GGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGG 112140 | ||| || ||||||| ||| |||||| |||| ||||||||||||||||| || ||| Sbjct 56802 GTGCCCGTGAGCTCTTCTACGCCCTCTGGGTTCCCGATCTCTTCATGAAGAGGGTCGAGC 56861 Query 112141 AGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGG 112200 ||| || | ||||| ||| | || || || || ||||||||| | || | | Sbjct 56862 AGAACGGTGACTGGTCGCTCATGTGCCCTAACGAGTGTCCCGGTCTCGCTGACTGCTACG 56921 Query 112201 GTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCG-ACG 112259 | ||||||||||| |||||| ||||||| || |||| | | ||| || Sbjct 56922 GCGAGGAGTTTGAGCGTCTCTACGAGCGCTACGAGGCCGAGGGTCGCTCCA-AGCGCACC 56980 Query 112260 GTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACC 112318 || | || | || | | ||| | || || ||| |||| || ||||||||||||| || Sbjct 56981 GT-CAAGGCTCAGAAGCTCTGGTACGCCATCCTCGAGTCCCAGACCGAGACTGGTAACCC 57039 Query 112319 ATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGAT 112378 | || |||||||| ||||| |||| ||||| || || ||||| | ||| || Sbjct 57040 CTTCATCCTTTACAAGGACGCTGCCAACCGCAAGAGCAACCAGAAGAACCTCGGTACCAT 57099 Query 112379 CAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAG-ACA-AAGATGAGACGGCT 112436 |||| | |||||||| || ||||| ||| | || ||||| || |||||| ||| Sbjct 57100 CAAGTGCTCCAACCTTTGCACAGAGATCATCGA--GTACAGTGCACCCGATGAGGTCGCT 57157 Query 112437 GTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTT 112496 || || ||| | || || ||||||||||||| | | || || | || ||| | Sbjct 57158 GTCTGCAACTTGGCTTCGATCGCTCTCCCCACCTTCATCGACCCTGTCACCAAGGTCTAC 57217 Query 112497 GATTATGAAAAAC-TCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTAT 112555 || | | || | | ||||| || | || | || |||||| | |||| | || Sbjct 57218 GACT-TCAAGCGCTTGCACGAGGTCGCCAAGGCCATCTGCAAAAACTTGAACAAGATCAT 57276 Query 112556 TGATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTCC 112612 || | || | ||||| || ||| ||||| || || || ||| | ||||| || Sbjct 57277 CGACATCAACTACTACCCTGTCCCCGAG---GCTCGCAAGTCCAACATGCGCCACCGACC 57333 Query 112613 AATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCAT--TCTTTGTCGCCACGCATTT 112670 || ||| ||||||| || ||||| || || | ||||| || | | || |||| ||| Sbjct 57334 CATCGGTATCGGTGTTCAGGGTCTTGCTGACGCCTTCATGATCATGG--GCTACGCTTTT 57391 Query 112671 GATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCT 112730 || || ||| || |||| | | || || ||||| || || ||||| ||| Sbjct 57392 GAGTCGCCCGAGGCCCGCCGCCTCAACGTTCAGATCTTCGAGACCATCTACCACGCTGCT 57451 Query 112731 CTTGAGGCGA-GTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTC 112789 || || |||| | ||| | || ||| | || | || || |||| | ||||| Sbjct 57452 CTCGA-GCGATCCTGCGAGCTTGCCCAGGAGCACGGCACCTACGAGACCTACGCCGGTTC 57510 Query 112790 TCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC-TTCACT 112848 || ||||| || || | ||| || | || ||||||| || | ||| | | || Sbjct 57511 CCCCGCTTCGCAGGGTGAGCTCCAGTACGACATGTGGG-GTGTTACACCCTCCGACCTCT 57569 Query 112849 ACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGA 112908 ||||||| | ||||||| || || | |||||||| ||| || ||| Sbjct 57570 GGGACTGGGCCAGCCTCAAGGCCAAGATTGCCAAGCACGGTCTTCGCAACTCGCTCTTGC 57629 Query 112909 TGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAAC 112968 | || || ||||| || ||||| ||| || || | || || || ||||| || | Sbjct 57630 TCGCTCCCATGCCTACTGCCTCGACCAGTCAGATTCTCGGCTTCAACGAGTGCTTCGAGC 57689 Query 112969 CCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACA 113028 | ||||| |||||||||| | | | ||||| || ||||| | | |||||| Sbjct 57690 CTTACACCTCGAACATCTACTCGCGCCGTGTACTCGCTGGTGAGTTCCAGGTCGTCAAC- 57748 Query 113029 AGCATCTCGTGG----ATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGA- 113083 | | | || | ||| ||| ||| ||||| ||| | | |||||| | Sbjct 57749 --CCT-TGGTTGCTCCGTGAGCTCGTTGAGCAAGGTCTTTGGAACGACACCATGAAGAAC 57805 Query 113084 --TCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATT 113141 | |||| | | |||||||| ||||| || || | ||| || || || Sbjct 57806 CGTATCATCGCTCA---CGGTGGTTCGATTCAGAACGTTCCCGGTATCCCTGACCGTATC 57862 Query 113142 AAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCA 113201 |||||| | ||| || |||||||| |||| ||||| | |||| |||||||| || Sbjct 57863 AAGAAGCTCTACAAGACCGTTTGGGAGATCAGTCAGAAGGCTATCATCGACATGGCGGCC 57922 Query 113202 GATCGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGA--ATCTATTCATGGAAAGTCC 113257 || |||||| ||||| | |||| ||| | | ||| | | | | | || Sbjct 57923 GACCGTGGTGCTTTCAT--CTGCCAGTCGCAGTCGCTCAACATCCACTTGTCGGCA--CC 57978 Query 113258 AACGAT--GTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACG 113315 || | ||| ||||| |||| |||||| | ||| ||||||||||||||||||| || Sbjct 57979 TACTTTCGGTC--AGCTCACTTCGATGCACTTCTACGGTTGGAAGAAGGGTCTCAAGACC 58036 Query 113316 GG 113317 || Sbjct 58037 GG 58038 >seq69 Length=107628 Score = 118 bits (130), Expect = 1e-21 Identities = 121/158 (77%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 102174 TTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTC 102233 ||||| || || ||| |||| || || || || |||||||||||||| ||||| ||| Sbjct 12460 TTTGCCGAACGTCTCGTCGCTTTCGCCGCCGTCGAAGGTATCTTCTTCTCCGGTTCGTTC 12519 Query 102234 TGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAG 102293 | || | |||||||||||||| ||||||||||| |||||| |||||||||||| Sbjct 12520 GCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTCACTTTCTCCAACGAG 12579 Query 102294 CTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 || ||||| ||||| ||||| | ||| || ||||| Sbjct 12580 CTCATCTCGCGTGATGAGGGCATGCACACCGACTTTGC 12617 >seq82 Length=90256 Score = 116 bits (128), Expect = 5e-21 Identities = 250/365 (68%), Gaps = 14/365 (4%) Strand=Plus/Plus Query 176723 TTGAGAATGAGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGA 176782 |||| ||||||||||||||||| ||||| |||| ||| ||| ||||||||||||| | Sbjct 62457 TTGATGATGAGACCCTTGATGTGCGAACCATCGTGATCCTGATCGGTCATGATCATGATA 62516 Query 176783 CGACCATACCG-AAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGAT 176841 | || || || ||||| | ||||| | || | ||| || || || ||||| | || Sbjct 62517 CTTCCGTATCGCAAGCT-GTTGACATCGAGGTACTGCTTGCCGTGCTGGAGACCGAGAAT 62575 Query 176842 CTTCTTGAGATCGTTGAACTC----TTGGT-TTGATGTGAGCTGTGTGACAGAGGCATCA 176896 || ||||| | |||| ||| || | |||| ||| | |||| | ||| || Sbjct 62576 CTCCTTGATGGCCTTGATCTCGGCATTCTTCATGATCTGATC-GTGT----GTGGCCTCG 62630 Query 176897 CGAACATTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGACCAACCACA 176956 || || || | ||| || ||||| || |||||||| ||| || || || || || Sbjct 62631 CGGACGTTGAGAAGCTTACCTCGAAGCGGAAAGACACCAAAGTTGTCACGCCCGACTTCA 62690 Query 176957 GAGAGACCCGCAACCGCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAGTGTACAC 177016 | || ||| | || |||||||| || || || ||||| || || | ||||| || || Sbjct 62691 GCGATACCGGAGACGGCGAGCGTCTTGGCGGAGTCACCTTCGGTGAGAATGAGCGTGCAG 62750 Query 177017 TTGCCAGATTGTGC-CGTACCCGCCTTGTTCGCATCATCCAATTTGGGAATACCAGTAAT 177075 | || || ||| ||| || ||||| ||||| || | |||||||| ||||| Sbjct 62751 TCCTTAGCTT-TGCGACCACCAGCGTTGTTGGCATCTTCGAGCTTGGGAATGTTCGTAAT 62809 Query 177076 TTTGG 177080 | ||| Sbjct 62810 TCTGG 62814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620642770844800