Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09- 20] 12,840 sequences; 23,769,677 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq81 205 1e-47 seq43 145 9e-30 seq69 91.5 2e-13 >seq81 Length=91273 Score = 205 bits (226), Expect = 1e-47 Identities = 1146/1805 (63%), Gaps = 57/1805 (3%) Strand=Plus/Minus Query 109421 TACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGCATTGAAGAGAGTTTG--GAAAG 109478 |||| || |||||||| |||||| |||| | ||||| |||| ||| | ||||| Sbjct 58040 TACCGGTCTTGAGACCCTTCTTCCAACCGTAGAAGTGCATCGAAGTGAGCTGACCGAAAG 57981 Query 109479 TGTCGGACTCTCCATAAACAAGTTCATCGACTGAGACTGATCGATGAATCGACCACGATC 109538 | || | || | ||| | |||||| ||||| |||||| |||||| || Sbjct 57980 TA--GGTGCCGACAAGTGGATGTTGAGCGACTGCGACTGGCAGATGAAAGCACCACGGTC 57923 Query 109539 AGCCGCCATGTCGATGATACACTTTTGGCTAATTTCCCAGACAGTCTTGTACAAATTCTT 109598 |||||||||||||||||| ||| || || || ||||| || |||||||| | ||||| Sbjct 57922 GGCCGCCATGTCGATGATAGCCTTCTGACTGATCTCCCAAACGGTCTTGTAGAGCTTCTT 57863 Query 109599 GATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCACCAGCCTTCACCATGAGA-- 109656 |||| || || || | | ||| ||||| || ||||| | | |||| | Sbjct 57862 GATACGGTCAGGGATACCGGGAACGTTCTGAATCGAACCACCG---TGAGCGATGATACG 57806 Query 109657 -TCCTTCATCTCTTTCGA-CCAGAGACCGACCTTTTTGAGATCGT----CAACAAGATGC 109710 | |||||| | ||| ||| ||||| || ||| || |||| | | | Sbjct 57805 GTTCTTCATGG-TGTCGTTCCAAAGACCTTGCTCAACGAGCTCACGGAGCAACCA-AGGG 57748 Query 109711 TTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAG 109770 ||| |||| || | |||||||| ||| || || ||||||||| | ||||| Sbjct 57747 TTGACGACCTGGA---ACTCACCAGCGAGTACACGGCGCGAGTAGATGTTCGAGGTGTAA 57691 Query 109771 GGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCC 109830 || ||||| ||||| ||| ||| || || || || || || || ||||||||||| Sbjct 57690 GGCTCGAAGCACTCGTTGAAGCCGAGAATCTGACTGGTCGAGGCAGTAGGCATGGGAGCG 57631 Query 109831 ATGAGAAGACTGTTTCGGAGACC---CTTCG---TCTTTACCCGCTCACGCATTGCGTCC 109884 | | || ||| || ||||| ||| | |||| || | | || | || Sbjct 57630 AGCAAGAGCGAGTTGCGAAGACCGTGCTTGGCAATCTTGGCCT--TGAGGCT----GGCC 57577 Query 109885 CAATCATAACGACCACTAAATTTAGTCTCACCATCCCACATATCTGGTTGAAGTACACCC 109944 || || | || | | | || |||| |||||| || || || ||||| Sbjct 57576 CAGTCCCA--GAGGTCGGAGGGT-GTAACACC---CCACATGTCGTACTGGAGCTCACCC 57523 Query 109945 TCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCAACTCGGAT 110004 | | ||| || ||||| | | ||||||| | || | ||| ||| | |||| | Sbjct 57522 TGCGAAGCGGGGGAACCGGCGTAGGTCTCGTAGGTGCCGTGCTCCTGGGCAAGCTCGCAG 57463 Query 110005 GAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTCATGAGGCGAGAC 110064 || ||| || || || || || || ||||| || || ||| | || | | |||| | | Sbjct 57462 GATCGCTCGAGAGCAGCGTGGTAGATGGTCTCGAAGATCTGAACGTTGAGGCGGCGGGCC 57403 Query 110065 TCTTCACAGTCGAAGG-GAAGACCACAAAGAATAAACACATCCGCTAGACCCTGAACACC 110123 || | || || | | || ||| | | | || | || || |||||||||||||| Sbjct 57402 TCGGGCGACTCAAAAGCGTAGCCCATGATCA-TGAAGGCGTCAGCAAGACCCTGAACACC 57344 Query 110124 GAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCTACGGGGTAAAAGTT 110183 || ||| ||||| || || |||||| || ||||| || ||||| |||| Sbjct 57343 GATACCGATGGGTCGGTGGCGCATGTTGGACTTGCGAGCCTCGGGGACAGGGTAGTAGTT 57284 Query 110184 GCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATGGA---GTTT 110240 | |||||||| | || | || || | | ||| | || || || | | || Sbjct 57283 GATGTCGATGATCTTGTTCAAGTTTTTGCAGATGGCCTTGGCGACCTCGTGCAAGCGCTT 57224 Query 110241 GTCGTAATCGAACGTTTTCGTCTCCTTATTGACATATTTGGGGAGAGCAATAGACGCAAG 110300 | || | || | || || | | || | |||||||||| || || || | Sbjct 57223 GAAGTCGTAGACC---TTGGTGACAGGGTCGATGAAGGTGGGGAGAGCGATCGAAGCCAA 57167 Query 110301 ATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGA 110360 ||||| |||| ||| || | |||| || | || || || || | |||||| Sbjct 57166 GTTGCAGACAGCGACCTCATCGGGTGCACTGTACTCGATGATCTCTGTGCAAAGGTTGGA 57107 Query 110361 ACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAG 110420 | ||| ||| ||| | ||||||||| || ||| |||| || ||||| || || Sbjct 57106 GCACTTGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGGCAGCGTCCTTGTAAAG 57047 Query 110421 CATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATA-CATCGGCGG 110479 ||| | ||| ||||||| || ||||| |||| ||| ||||| | ||| | | || | | Sbjct 57046 GATGAAGGGGTTACCAGTCTCGGTCTGGGACTCGAGGATGGCGTACCAGAGCTTCTGAGC 56987 Query 110480 CGGGGACAGTTGCG-TTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAAT 110538 | | || || ||| || | | |||| || ||||||| ||| | |||||| Sbjct 56986 CTTG-ACGGT-GCGCTTGGAGCGACCCTCGGCCTCGTAGCGCTCGTAGAGACGCTCAAAC 56929 Query 110539 TCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTT 110598 |||| ||||| |||| ||||| || || || || | ||| ||||| | Sbjct 56928 TCCTCGCCGTAGCAGTCAGCGAGACCGGGACACTCGTTAGGGCACATGAGCGACCAGTCA 56869 Query 110599 CCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCA 110658 || || ||| |||||||||||||| || || |||| ||| | || |||| || ||| Sbjct 56868 CCGTTCTGCTCGACCCTCTTCATGAAGAGATCGGGAACCCAGAGGGCGTAGAAGAGCTCA 56809 Query 110659 CGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCC 110718 ||| ||| |||| || | ||| ||||| ||| || || | || || | || |||| Sbjct 56808 CGGGCACGTACCTCCTCCTTACCGTGGTTCTTGCGGAGGTCAAGGAACTCGAAGACATCC 56749 Query 110719 GAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACG---ACGACCCGCCTGGTTA 110775 |||||||| || || | |||| || | || || ||| ||| |||||| | Sbjct 56748 GAGTGCCAAGGCTCAATGTAGATGGCAAAGGCACCGGGACGCTTGTTACCACCCTGGTCA 56689 Query 110776 ACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCA 110835 || || ||||| ||| |||||||| | |||||| |||| || || | | |||| Sbjct 56688 ACGTATCGTGCAGTGTTGTTGAAGACACGGAGCATGGGAACGATACCGTTGCTGACACCA 56629 Query 110836 TTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCA 110895 || ||||| ||| ||| | | | || |||| |||||| | | ||| |||||| Sbjct 56628 TTGGTACCGGCAATGTAGGAGCCAGTTCCTCGGATGTTGTGGATGTTGAGACCGATACCA 56569 Query 110896 CCCGCCCACTTACTAATTTGTGCACA-CTCTGTGAGTGTACCATAAATACCATCAATCGA 110954 || || ||| || || || ||| |||| || | || ||||| || ||||| Sbjct 56568 CCAGCGGTCTTGGAGATCATGGCGCAGGTCT-TGAGGGTGTCGTAGATACCGTCGATCGA 56510 Query 110955 ATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATT 111014 || |||| ||| | || || || || || | ||| || | || || || || || Sbjct 56509 GTCATCCTTCATGGTGACAAGGAAACACGACGAGAGCTGGGGGTGGGGAGTACCAGCGTT 56450 Query 111015 GAAGAGTGTAGGTGTCGCATGAATGAACAGACCT-TGGGACATCTTGTTGTATGTGTCGA 111073 |||||| || || | || || |||| | || | || ||||| ||||| || |||| Sbjct 56449 GAAGAGGGTGGGGGAAGCGTGTGTGAAGA-ACTTCTGCGACATGAGATTGTAGGTCTCGA 56391 Query 111074 GTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAACTCGCATGAACATATATTGAG 111133 ||| | || | ||||| ||||||| || || ||||||| ||| | || | Sbjct 56390 TGGCGCTTTCGATGTCCTCGCCGTGGATACCAACAGCGACACGCATGAGCATGTGCTGGG 56331 Query 111134 GCGTTTCGATTAGCTTTCCATCAACACGCTGAAGGTAACTCTTCTCTAGGGTCTTGAGAC 111193 | || | ||| || | || ||| ||||||| ||| |||||||||| || Sbjct 56330 GACGCTCAGCAACCTTGCCGTTAATACGGAGAAGGTAGGATCGCTCGAGGGTCTTGAAAC 56271 Query 111194 CAAAG 111198 | ||| Sbjct 56270 CGAAG 56266 >seq43 Length=174872 Score = 145 bits (160), Expect = 9e-30 Identities = 332/489 (68%), Gaps = 17/489 (3%) Strand=Plus/Plus Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562 ||||| |||||||| || || | | ||| |||| |||| || ||||| ||| | Sbjct 29720 CGATCAAAACGACCGGGACGCATCAAAGCGGCATCGAGAACGTCAGGTCGGTTGGTACCA 29779 Query 11563 GCAATGACTACAATGCCAGTCTCATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTG 11622 || | || || | | ||| | ||||||||||||| | | || | || |||| Sbjct 29780 GCGAGCACAACGACGTGCTCCTCGGTTCCGAAACCGTCCATCTGTACAAGCAACTCGTTG 29839 Query 11623 ATCGTCTGTTCACGCTCATCGTTGGAGGGCA---TACCACC--TGCCGAACGCTTCTTAC 11677 | |||| || ||||| |||||| | | ||||| |||| ||| |||| | Sbjct 29840 AGCGTCGACTCGCGCTCGTCGTTGCCTCCAAAGTTGCCACCCTTGCC--ACGGCTCTTTC 29897 Query 11678 CGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTT--C 11735 ||| ||||| |||||||||||||| | ||| || || || | | || | ||| | Sbjct 29898 CGATGGCGTCGATCTCATCGATGAAGATGATGCAAGGAGCGT-GCTTCTTGGC-GTTGGC 29955 Query 11736 GAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGC 11795 ||| | || || ||||| | | || ||||| ||||||||||| ||||| | | | Sbjct 29956 GAACATGTCTCGAACACGACTGGGACCGACACCGACGAACATCTCGACGAACTCGGAACC 30015 Query 11796 AGAACACTGA-ATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCT 11854 || ||||| | ||| || ||| || |||||||||| | || || | || |||| Sbjct 30016 CGAG-ACTGACAAGAAAGGCACACCAGCCTCACCAGCGGTAGCCTTGGCCAACAGTGTCT 30074 Query 11855 TACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC--ACTTCC 11912 |||| ||||| || | ||| | |||| ||| ||||| |||||||||||||| |||| Sbjct 30075 TACCGGTACCGGGAGGACCCGAAAGAATGGCACCACGCGGGATCTTGGCACCGAGCTTCT 30134 Query 11913 AAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGCGGA 11972 | || ||| |||||||||||||||| || | |||| | ||||||||||| Sbjct 30135 CA--TACTTCTCTGGCTTCTTGAGGAAGTTGACGAACTCCATGATCTCCTCCTTGGCTTC 30192 Query 11973 GTCGATACC 11981 ||| ||||| Sbjct 30193 GTCCATACC 30201 >seq69 Length=107628 Score = 91.5 bits (100), Expect = 2e-13 Identities = 157/225 (70%), Gaps = 5/225 (2%) Strand=Plus/Minus Query 119514 CCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTC 119573 || ||||| || ||||||||||| || ||| || || |||||||| || | ||| Sbjct 12599 CCCTCATCACGCGAGATGAGCTCGTTGGAGAAAGTGAGACCGGGCATGAGACCACGCTTC 12540 Query 119574 TTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCGAAA 119633 || ||||| ||||||| | || || || |||||||| || || || ||||||| Sbjct 12539 TTGAGCCAGAAGATGGAAGCGAACGAACCGGAGAAGAAGATACCTTCGACGGCGGCGAAA 12480 Query 119634 GCGAATAGACGCTCAGCAAAAG-GTCGAGACTTGTC---GAACCACTTGAGAGCCCAGTT 119689 |||| ||||| || ||||||| | || ||| ||| || ||| |||||||||| Sbjct 12479 GCGACGAGACGTTCGGCAAAAGTGGCGCGAC-GGTCCGAGATCCAACGAAGAGCCCAGTC 12421 Query 119690 GGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAG 119734 ||| || ||| | | ||||| || | || ||| ||||| || Sbjct 12420 GGCTTTTTGCTTGACGACGGGGATGGTCTCGACGGCGTCGAAGAG 12376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588881469352000