Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09- 20] 12,840 sequences; 23,769,677 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq144 123 2e-23 seq62 116 2e-21 seq33 104 2e-17 >seq144 Length=29207 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||| | ||| | | || | ||||| ||||| || ||||| ||||| ||||||||| Sbjct 8867 CCTCCGCGCAAACGAAGCACAAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGAA 8808 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| | || |||| |||| ||| || || ||||| || || || |||||||| | || Sbjct 8807 AGGGTGCGACCATCTTCCAACTGCTTACCTGCAAAGATAAGACGCTGCTGGTCAGGGGGG 8748 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | ||||||||||| |||||| ||||| | |||| || || ||| || Sbjct 8747 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGAGGACTCGACT 8688 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || | || ||||| ||||| ||||| ||||| |||||||| |||||| Sbjct 8687 TCCAATGTGATGGTCTTTCCTGTGAGTGTCTTGACAAAGATTTGCATA 8640 Score = 116 bits (128), Expect = 2e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | ||| || ||||| ||||| |||||||| ||| |||| |||| ||| Sbjct 8165 ACCAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTTCGGCCATCTTCC 8106 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 | |||||| || || || || || || |||||||| | || | ||||||||||| | Sbjct 8105 AACTGTTTACCAGCGAAGATGAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGA 8046 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 || || |||||| | || | || | ||| || |||| ||| ||||| || Sbjct 8045 ATTTTGGCCTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTA 7986 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || |||||||| |||||||||||||| Sbjct 7985 CCGGTCAGAGTCTTGACAAAGATCTGCAT 7957 Score = 109 bits (120), Expect = 4e-19 Identities = 154/215 (72%), Gaps = 1/215 (0%) Strand=Plus/Minus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| || | ||| | ||||| || ||||| ||||| |||||||| ||| | || | || Sbjct 9082 CAAGACAAGGTGCAAAGTGCTCTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGACCGTC 9023 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCC-CCTCCTTGT 34887 |||| ||| || || ||||| || || || |||||||| | || | ||||||||| Sbjct 9022 TTCCAACTGCTTACCTGCAAAGATAAGACGCTGCTGGTCCAGGGGGAATATCCTCCTTGT 8963 Query 34888 CGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGG 34947 | |||||| |||||| | || | || | |||||| |||| ||| || | Sbjct 8962 CTTGAATCTTGGCCTTGACGTTGTCAATGGTGTCCGACGACTCAACCTCGAGGGTGATCG 8903 Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | ||||| ||||| ||||| ||||||||||||||| Sbjct 8902 TCTTTCCAGTGAGCGTCTTGACAAAGATCTGCATA 8868 Score = 87.8 bits (96), Expect = 1e-12 Identities = 138/197 (70%), Gaps = 8/197 (4%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||||||||| ||||| || || || | | | || | || || ||||| |||||||| || Sbjct 8376 TTCTTTCTGGATGTTGTAATCGGACAAGGTGCGGCCGTCCTCAAGCTGCTTTCCGGCGAA 8317 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || || ||||| || | || | || |||||||| |||||| |||||| Sbjct 8316 AATGAGACGCTGCTGATCGGGAGGAATGCCTTCCTTGTCCTGAATCTTGGCCTTGACGT- 8258 Query 34910 TGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCT 34965 ||||||| ||| | |||||| |||| || ||||| || || || | |||| Sbjct 8257 ---TATCGATAGTGTCAGACGACTCAACCTCGAGAGTAATGGTCTTGCCGGTCAAGGTCT 8201 Query 34966 TCACAAAGATCTGCATA 34982 | || |||||||||||| Sbjct 8200 TGACGAAGATCTGCATA 8184 Score = 87.8 bits (96), Expect = 1e-12 Identities = 146/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||| | ||||| ||||| || || |||||||| ||||| || || |||| | || || Sbjct 8622 AACGAGGTGAAGCGTGCTCTCCTTTTGAATGTTGTAGTCGGAGAGTGTTCGGCCGTCCTC 8563 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 || || ||||| ||||| || || |||||||| || | || | || |||||||| Sbjct 8562 AAGTTGCTTTCCAGCAAAGATGAGGCGTTGCTGATCAGGTGGAATGCCTTCCTTGTCCTG 8503 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 ||||| || ||| | || | ||| | ||| || |||| || ||||| || Sbjct 8502 GATCTTGGCCTTTACGTTGTCGATGGTATCAGAAGACTCGACCTCGAGAGTAATGGTCTT 8443 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || || || || |||||||||||| Sbjct 8442 GCCTGTAAGGGTTTTGACGAAGATCTGCATA 8412 >seq62 Length=118391 Score = 116 bits (128), Expect = 2e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837 ||||| ||| || ||||| ||||| |||||||| ||| | || |||| || ||||| Sbjct 71435 GTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCATCCTCGAGCTG 71494 Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897 || || ||||| || || || |||||||| | || | |||||||| || |||||| Sbjct 71495 CTTACCAGCAAAGATAAGACGCTGCTGGTCAGGTGGGATACCCTCCTTATCCTGAATCTT 71554 Query 34898 CTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGT 34957 |||||| | || | || || |||||| |||| ||| ||||| || || || Sbjct 71555 GGCCTTGACGTTGTCAATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCGGT 71614 Query 34958 GAGAGTCTTCACAAAGATCTGCAT 34981 ||| ||||| |||||||||||||| Sbjct 71615 GAGGGTCTTGACAAAGATCTGCAT 71638 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/214 (70%), Gaps = 8/214 (4%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 ||||| |||| |||| ||| ||||| ||||| || || ||||| | || | || || Sbjct 71202 ACCAAATGAAGTGTGGATTCCTTCTGGATGTTGTAATCTGAAAGAGTGCGGCCGTCTTCG 71261 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || ||||| || || || || ||||| || | || | || |||||||| Sbjct 71262 AGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATCGGGAGGGATGCCTTCCTTGTCCTGG 71321 Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGT 34948 ||||| |||||| | ||||| | ||| | ||| || || | || ||||| Sbjct 71322 ATCTTGGCCTTGACGT----TGTCGATGGTGTCCGAAGACTCGACTTCAAGAGTGATGGT 71377 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || | |||||| ||||||||||||||| Sbjct 71378 CTTGCCAGTCAAAGTCTTGACAAAGATCTGCATA 71411 >seq33 Length=194022 Score = 104 bits (114), Expect = 2e-17 Identities = 143/198 (72%), Gaps = 8/198 (4%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| |||||||||||| | ||| |||| || ||||| || ||||| || Sbjct 184305 TCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGTCCATCTTCGAGCTGCTTACCGGCGAAG 184246 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||| || | || | || |||||||| ||||| ||||| Sbjct 184245 ATGAGACGCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGAC---- 184190 Query 34911 GCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | | ||||| | ||| | ||| || || | ||| ||||| || ||||| || ||||| Sbjct 184189 GTTGTCGATGGTGTCCGAAGACTCCACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTT 184130 Query 34967 CACAAAGATCTGCATATT 34984 |||||||||||||| || Sbjct 184129 AACAAAGATCTGCATCTT 184112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324582798899520