Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09- 20] 12,840 sequences; 23,769,677 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq81 289 5e-73 seq69 167 4e-36 >seq81 Length=91273 Score = 289 bits (320), Expect = 5e-73 Identities = 869/1325 (66%), Gaps = 41/1325 (3%) Strand=Plus/Minus Query 221370 CGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTGCGTCAGGGCAGCGT 221429 |||| | |||||||| |||| | | ||| | |||| || || || ||||||| Sbjct 57503 CGTAGGTCTCGTAGGTGCCGTGCTCCTGGGCAAGCTCGCAGGATCGCTCGAGAGCAGCGT 57444 Query 221430 GGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAAGTGAAGGGCA 221489 ||||||||||||| |||||| |||||| | ||||||||| || | || || Sbjct 57443 GGTAGATGGTCTCGAAGATCTGAACGTTGAGGCGGCGGGCCTCGGGCGAC-TCAAAAGCG 57385 Query 221490 TA-CGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCCTGTGT 221548 || | || ||| ||| |||| || || ||||| || |||||||||||||| | ||| Sbjct 57384 TAGCCCATGATCATGAAGGCGTCAGCAAGACCCTGAACACCGATACCGATGGGTCGGTGG 57325 Query 221549 CTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCAGATTGTTG 221608 | | ||||||| | || || || || || || |||||| |||||| | ||||| Sbjct 57324 CGCATGTTGGACTTGCGAGCCTCGGGGACAGGGTAGTAGTTGATGTCGATGATCTTGTTC 57265 Query 221609 AGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACACCAACTCG 221668 | ||| |||| | || | |||||| || | | ||||| ||| Sbjct 57264 AAGTTTTTGCAGATGGCCTTGGCGACCTCGTGCAA------GCGCTTGAAG------TCG 57217 Query 221669 CCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGGTTACACACG 221728 | | | | || || || | || | | || || | |||| ||| || || Sbjct 57216 TAGACCTTGGTGACAGGGTCGATGAAGGTGGGGAGAGCGATCGAAGCCAAGTTGCAGACA 57157 Query 221729 GCCACCTCGTCCTTGTTGG--TATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTGA 221786 || ||||| || | || | |||| ||||||||||| || |||||| |||||||| Sbjct 57156 GCGACCTCATCG--GGTGCACTGTACTCGATGATCTCTGTGCAAAGGTTGGAGCACTTGA 57099 Query 221787 TGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAGG 221846 |||| || |||| || || || |||||| ||||||||||||||||| || || |||| Sbjct 57098 TGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGGCAGCGTCCTTGTAAAGGATGAAGG 57039 Query 221847 GACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTG-GCGCTCACC 221905 | |||||||| ||| | | | || || || |||||| | |||| || | || Sbjct 57038 GGTTACCAGTCTCGGTCTGGGACTCGAGGATGGCGTACCAGAGCT-TCTGAGCCTTGACG 56980 Query 221906 GTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCATGTCAAACTTTTCA 221965 || | |||| |||||||| | || || | ||||| ||||||| || Sbjct 56979 GTGCGCTTGGAGCGACCCTCGGCC---TCGTAGCGCTCGTAGAGACGCTCAAACTCCTCG 56923 Query 221966 CCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCAGTGCTTGTTG 222025 ||||| || | || || |||||| | || ||||| || ||||| ||| Sbjct 56922 CCGTAGCAGTCAGCGAGACCGGGACACTCGTTAGGGCACATGAGCGACCAGTCACCGTTC 56863 Query 222026 TCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTC 222085 | | |||||||| ||||||||| || || | ||| || || | ||||| || | || Sbjct 56862 TGCTCGACCCTCTTCATGAAGAGATCGGGAACCCAGAGGGCGTAGAAGAGCTCACGGGCA 56803 Query 222086 CGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGC 222145 || ||||||| |||| ||| || | || || | ||||| || | || | |||| Sbjct 56802 CGTACCTCCTCCTTACCGTGGTTCTTGCGGAGGTCAAGGAACTCGAAGACATCCGAGTGC 56743 Query 222146 CACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCAC-CAT 222204 || ||||| | |||| ||| | || ||||| |||||||| |||||||| || || || Sbjct 56742 CAAGGCTCAATGTAGATGGCAAAGGCACCGGGACGCTTGTTACCACCCTGGTCAACGTAT 56683 Query 222205 CCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTTGG 222263 | | ||| | |||||||| || || | || || | |||||| ||| |||| Sbjct 56682 C--GTGCAGTGTTGTTGAAGACACGGAGCATGGGAACGATACCGTTGCTGACACCATTGG 56625 Query 222264 TGCCCTTAATGTACGCACCGCCGGCCCTCAGGT-TACTGGCAG-ACATGCCGATACCACC 222321 | || |||||| | | | | |||| | | | ||| | | ||||||||||| Sbjct 56624 TACCGGCAATGTAGGAGC--CAGTTCCTCGGATGTTGTGGATGTTGAGACCGATACCACC 56567 Query 222322 GGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATAGAGTC 222381 ||| || ||||||||||||||| ||||||| ||||| ||| || || || ||||| Sbjct 56566 AGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATACCGTCGATCGAGTC 56507 Query 222382 CTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGGCGTTAAA 222441 ||||| | | | | || ||||| ||||| | ||| | | || | || ||||| || Sbjct 56506 ATCCTTCATGGTGACAAGGAAACACGACGAGAGCTGGGGGTGGGGAGTACCAGCGTTGAA 56447 Query 222442 CAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTCTCTACGAC 222501 || ||||| |||||||| ||| | | ||||| |||| ||| ||||| | | | Sbjct 56446 GAGGGTGGGGGAAGCGTGTGTGAAGAACTTCTGCGACATGAGATTGTAGGTCTCGATGGC 56387 Query 222502 TCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACATGTACTGGGGCCT 222561 || |||||| || ||||| || | ||| | |||| ||||| |||||| | Sbjct 56386 GCTTTCGATGTCCTCGCCGTGGATACCAACAGCGACACGCATGAGCATGTGCTGGGGACG 56327 Query 222562 CTCCACAGGACCCTTGGAGCT-----GGAGAGCAGGTACGATTTTTCCAGAGTCTTGAAC 222616 || ||| | ||||| | | ||||| ||||| ||| || || |||||||| Sbjct 56326 CT---CAGCAACCTTGCCGTTAATACGGAGA--AGGTAGGATCGCTCGAGGGTCTTGAAA 56272 Query 222617 CCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCGGCGTCCAGCTCCGACTTG 222676 || ||| ||||| || ||||| | ||| || | || | ||| |||| |||| Sbjct 56271 CCGAAGAAGTTGTAGTGGAAGTCGCGCTCGTAAATGATTGCCGAGTCGAGCTGATCCTTG 56212 Query 222677 TGCTT 222681 ||||| Sbjct 56211 TGCTT 56207 >seq69 Length=107628 Score = 167 bits (184), Expect = 4e-36 Identities = 434/653 (66%), Gaps = 28/653 (4%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | |||||||||||||| || ||| |||||||||||||||||| || || Sbjct 12064 ATCTGGCAAATGTACAAGAAGGCCGAAGCCTCCTTCTGGACCGCCGAAGAGATCGACCTT 12123 Query 25537 GCCAAGGACATGGACGGCTGGTAC-----GCTCTATCCAAAGACGAGCAGCATTTTCTCA 25591 ||||||| | ||| ||| || |||| | | | |||||| || || || Sbjct 12124 TCCAAGGATCTTCACGATTGGGACAACAAGCTCAA--CGACAACGAGCGTCACTTCATCT 12181 Query 25592 AGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGA 25651 |||| | || ||||| || || || || ||||| || ||||||||||| |||| Sbjct 12182 CTCACGTCCTTGCCTTCTTCGCCGCTTCCGACGGTATCGTTAACGAGAATCTCGTCGAGC 12241 Query 25652 GATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCA 25711 ||||| || ||||| || || || || || ||||||||||||||||| | Sbjct 12242 GATTCTCCTCTGAAGTCCAAGCCGCCGAAGCTCGCTGCTTCTACGGTTTCCAGATCATGA 12301 Query 25712 TCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACG 25768 | || || | ||||| || || || || || || || ||||| || Sbjct 12302 TGGAGAACATCCACTCCGAAACCTACTCC---CTCCTCATCGACACCTACATCCGCGAAC 12358 Query 25769 TCG--CCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAA 25826 || | | | ||| || || || | ||| ||||| ||| ||| | ||||| || Sbjct 12359 CCGAGCAGCGCGAGTTC--CTCTTCGACGCCGTCGAGACCATCCCCGTCGTCAAGCAAAA 12416 Query 25827 GGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGT 25886 || ||||| | |||||| || |||| || |||| ||| || || || Sbjct 12417 AGCCGACTGGGCTCTTCGTTGGATCTCGGACCGTCGCGCCACTTTTGCCGAACGTCTCGT 12476 Query 25887 AGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCT 25946 || || || || || || || ||||| ||| ||||||||| || ||||||||||||| Sbjct 12477 CGCTTTCGCCGCCGTCGAAGGTATCTTCTTCTCCGGTTCGTTCGCTTCCATCTTCTGGCT 12536 Query 25947 CAAGCAGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCATCAGCAGGGACG 26005 |||| || || ||||||||| || ||||| ||||||||||||||| | || | Sbjct 12537 CAAGAAGCGTGGTCTCATGCCCGGTCT-CACTTTCTCCAACGAGCTCATCTCGCGTGATG 12595 Query 26006 AGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAAC--- 26062 |||| | |||| || ||||||||| |||||| | || || ||| | || | Sbjct 12596 AGGGCATGCACACCGACTTTGCCTGCTTGCTCTTCTCG---CA---TCTCAAGAAGCGCG 12649 Query 26063 CTTCTCAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAG 26115 || ||| |||||||| || || || |||||||| |||||||||||| Sbjct 12650 CTGCTCCCGAGACCGTTCTCAAGATTATTTCCGAGGCTGTAGAGATCGAGAAG 12702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928695720409600