Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09-
20] 12,840 sequences; 23,769,677 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq144 87.8 4e-12
>seq144
Length=29207
Score = 87.8 bits (96), Expect = 4e-12
Identities = 134/190 (71%), Gaps = 1/190 (1%)
Strand=Plus/Minus
Query 192347 CTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGA 192406
|||| || || || || || || | |||||| | || || | ||| || ||||||||||
Sbjct 8601 CTTTTGA-ATGTTGTAGTCGGAGAGTGTTCGGCCGTCCTCAAGTTGCTTTCCAGCAAAGA 8543
Query 192407 TTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAG 192466
| | | || ||||||||||| || ||||| || || || || || ||||| ||
Sbjct 8542 TGAGGCGTTGCTGATCAGGTGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTGT 8483
Query 192467 TTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAA 192526
|| | ||| || || || || || ||||||||||| || || || | ||||| | |
Sbjct 8482 CGATGGTATCAGAAGACTCGACCTCGAGAGTAATGGTCTTGCCTGTAAGGGTTTTGACGA 8423
Query 192527 ATATCTGCAT 192536
| ||||||||
Sbjct 8422 AGATCTGCAT 8413
Score = 86.0 bits (94), Expect = 1e-11
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|||||||| | ||||| | || || || || || | ||| || ||| || || ||
Sbjct 8186 ATACCACCACGGAGACGGAGGACCAAGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCC 8127
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | ||||| |||| ||||| ||||||||||| ||||| | | ||| || || ||
Sbjct 8126 GAGAGGGTTCGGCCATCTTCCAACTGTTTACCAGCGAAGATGAGACGCTGCTGGTCGGGA 8067
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || || || || || || ||||| || || || || | || || || ||
Sbjct 8066 GGGATACCCTCCTTGTCCTGAATTTTGGCCTTGACGTTGTCAATGGTGTCGGAAGACTCC 8007
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || || || ||||| ||||| || | || || | ||| ||||||||
Sbjct 8006 ACCTCGAGGGTGATGGTCTTACCGGTCAGAGTCTTGACAAAGATCTGCAT 7957
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984318040734000
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |