Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09-
20] 12,840 sequences; 23,769,677 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq135 107 6e-18
seq84 84.2 6e-11
>seq135
Length=36799
Score = 107 bits (118), Expect = 6e-18
Identities = 260/389 (67%), Gaps = 6/389 (2%)
Strand=Plus/Minus
Query 302491 TCAATTCCGTCATCGCCGTAGGAATACTGAATGATTTTGTTCTTGTTATTTCTTACGGTC 302550
|| || || || || ||||||| |||| |||| ||||| | ||| | |||||
Sbjct 15370 TCGATACCATCCTCTCCGTAGGCGAACTGGATGACATTGTTGGTCGAATTACGAACGGTT 15311
Query 302551 ATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCA 302610
|| || | | ||| | ||||| | ||||| | |||||||||||| || |||
Sbjct 15310 CCGTCGTAGCAGACCATGACATCTTCGAGCGCCTTGACGAGACGACGCTGAATGTATCCA 15251
Query 302611 GTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAG 302670
|| | || || ||||| ||||| || ||||| |||||||| |||| || ||||||
Sbjct 15250 GTCTCGGCAGTCTTGACAGCGGTATCGATCAGACCTTCACGACCAGCCATGGCGTGGAAG 15191
Query 302671 AATAGCTCTTCCGGTCGT-AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTC 302729
|| | ||||| || || || || | || | ||| |||| ||||||||||| ||
Sbjct 15190 AAGAACTCTT-GGGCGGTAAGACCACGAAGGTAAGAGTTCTCGACGAAACCACGACTTTC 15132
Query 302730 GGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGAT 302789
||| | |||| |||||| || || |||| | | || | ||| | || ||
Sbjct 15131 GGGAGTGAAGTCGTCCTTGGTGAAATGGGGCAAACTTCGGTGGCGGAAACCGAAGGGAAT 15072
Query 302790 ACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATT--TAAA 302847
|||||| || || ||| |||||| || | || | | ||||||||| || || | ||
Sbjct 15071 ACGCTTACCCTCGACGGACTGCTGACCGACACAAGCAGACATCTGCGAGATGTTGATGAA 15012
Query 302848 TCACTGCCCTTGGAGCCAGCATTTACCAT 302876
| |||||||| |||||| |||||
Sbjct 15011 GGA--ACCCTTGGAACCAGCAACCACCAT 14985
>seq84
Length=89315
Score = 84.2 bits (92), Expect = 6e-11
Identities = 106/143 (74%), Gaps = 2/143 (1%)
Strand=Plus/Plus
Query 251843 CGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGTCCAT 251902
|||| ||||| || |||||||| || || |||||||||||||||||| | | || |
Sbjct 67425 CGATGGTCATTCGCGAAGGAATAGCGTGCGGGTTGATGATGATGTCGGGTGTAACACCCT 67484
Query 251903 CAGCAGTGAAGGGCATATCCTTTTCCTCAATAA-TGTTTCCAATAGTTCCCTTTTGTCCG 251961
| || | ||||||||||| ||| | | ||| || |||| || || ||||| || |||
Sbjct 67485 CGGCGGAGAAGGGCATAT-CTTCTTGGCGGTAAGTGATTCCGATGGTACCCTTCTGACCG 67543
Query 251962 TGACGAGAACTGAACTTATCACC 251984
||||| || ||||| |||||
Sbjct 67544 TGACGCGAGGCAAACTTGTCACC 67566
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471575467607080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |