Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudozyma_20tsukubaensis_20[genbank_20GCA_5F001736125.1_202016-09- 20] 12,840 sequences; 23,769,677 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq135 107 6e-18 seq84 84.2 6e-11 >seq135 Length=36799 Score = 107 bits (118), Expect = 6e-18 Identities = 260/389 (67%), Gaps = 6/389 (2%) Strand=Plus/Minus Query 302491 TCAATTCCGTCATCGCCGTAGGAATACTGAATGATTTTGTTCTTGTTATTTCTTACGGTC 302550 || || || || || ||||||| |||| |||| ||||| | ||| | ||||| Sbjct 15370 TCGATACCATCCTCTCCGTAGGCGAACTGGATGACATTGTTGGTCGAATTACGAACGGTT 15311 Query 302551 ATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCA 302610 || || | | ||| | ||||| | ||||| | |||||||||||| || ||| Sbjct 15310 CCGTCGTAGCAGACCATGACATCTTCGAGCGCCTTGACGAGACGACGCTGAATGTATCCA 15251 Query 302611 GTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAG 302670 || | || || ||||| ||||| || ||||| |||||||| |||| || |||||| Sbjct 15250 GTCTCGGCAGTCTTGACAGCGGTATCGATCAGACCTTCACGACCAGCCATGGCGTGGAAG 15191 Query 302671 AATAGCTCTTCCGGTCGT-AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTC 302729 || | ||||| || || || || | || | ||| |||| ||||||||||| || Sbjct 15190 AAGAACTCTT-GGGCGGTAAGACCACGAAGGTAAGAGTTCTCGACGAAACCACGACTTTC 15132 Query 302730 GGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGAT 302789 ||| | |||| |||||| || || |||| | | || | ||| | || || Sbjct 15131 GGGAGTGAAGTCGTCCTTGGTGAAATGGGGCAAACTTCGGTGGCGGAAACCGAAGGGAAT 15072 Query 302790 ACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATT--TAAA 302847 |||||| || || ||| |||||| || | || | | ||||||||| || || | || Sbjct 15071 ACGCTTACCCTCGACGGACTGCTGACCGACACAAGCAGACATCTGCGAGATGTTGATGAA 15012 Query 302848 TCACTGCCCTTGGAGCCAGCATTTACCAT 302876 | |||||||| |||||| ||||| Sbjct 15011 GGA--ACCCTTGGAACCAGCAACCACCAT 14985 >seq84 Length=89315 Score = 84.2 bits (92), Expect = 6e-11 Identities = 106/143 (74%), Gaps = 2/143 (1%) Strand=Plus/Plus Query 251843 CGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGTCCAT 251902 |||| ||||| || |||||||| || || |||||||||||||||||| | | || | Sbjct 67425 CGATGGTCATTCGCGAAGGAATAGCGTGCGGGTTGATGATGATGTCGGGTGTAACACCCT 67484 Query 251903 CAGCAGTGAAGGGCATATCCTTTTCCTCAATAA-TGTTTCCAATAGTTCCCTTTTGTCCG 251961 | || | ||||||||||| ||| | | ||| || |||| || || ||||| || ||| Sbjct 67485 CGGCGGAGAAGGGCATAT-CTTCTTGGCGGTAAGTGATTCCGATGGTACCCTTCTGACCG 67543 Query 251962 TGACGAGAACTGAACTTATCACC 251984 ||||| || ||||| ||||| Sbjct 67544 TGACGCGAGGCAAACTTGTCACC 67566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471575467607080